Protein–RNA interactions for Protein: P55344

LIM2, Lens fiber membrane intrinsic protein, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2P55344 AC091078.2-201ENST00000557145 559 ntBASIC5.55□□□□□ -1.52
LIM2P55344 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC5.55□□□□□ -1.52
LIM2P55344 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.55□□□□□ -1.52
LIM2P55344 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC5.55□□□□□ -1.52
LIM2P55344 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.55□□□□□ -1.52
LIM2P55344 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LIM2P55344 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.55□□□□□ -1.52
LIM2P55344 AC093297.3-201ENST00000607056 2517 ntBASIC5.55□□□□□ -1.52
LIM2P55344 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
LIM2P55344 OR6C75-202ENST00000641576 4569 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
LIM2P55344 AC092646.2-201ENST00000431242 2095 ntBASIC5.55□□□□□ -1.52
LIM2P55344 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LIM2P55344 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
LIM2P55344 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.55□□□□□ -1.52
LIM2P55344 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC5.55□□□□□ -1.52
LIM2P55344 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
LIM2P55344 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
LIM2P55344 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
LIM2P55344 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
LIM2P55344 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LIM2P55344 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
LIM2P55344 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
LIM2P55344 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
LIM2P55344 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.54□□□□□ -1.52
LIM2P55344 KLHL28-202ENST00000396128 6545 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LIM2P55344 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LIM2P55344 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
LIM2P55344 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
LIM2P55344 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC5.54□□□□□ -1.52
LIM2P55344 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
LIM2P55344 OR56A3-201ENST00000329564 948 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
LIM2P55344 OR52B6-201ENST00000345043 1008 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
LIM2P55344 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LIM2P55344 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LIM2P55344 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
LIM2P55344 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.54□□□□□ -1.52
LIM2P55344 RPL5P10-201ENST00000445207 894 ntBASIC5.54□□□□□ -1.52
LIM2P55344 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC5.54□□□□□ -1.52
LIM2P55344 ACA64.1-201ENST00000459171 127 ntBASIC5.54□□□□□ -1.52
LIM2P55344 AC099521.1-201ENST00000482557 334 ntBASIC5.54□□□□□ -1.52
LIM2P55344 AC090142.2-201ENST00000483263 416 ntBASIC5.54□□□□□ -1.52
LIM2P55344 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
LIM2P55344 AC018709.1-201ENST00000509111 700 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
LIM2P55344 AC114781.3-201ENST00000512083 142 ntBASIC5.54□□□□□ -1.52
LIM2P55344 AC093535.1-203ENST00000512500 730 ntTSL 3 BASIC5.54□□□□□ -1.52
LIM2P55344 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.54□□□□□ -1.52
LIM2P55344 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.54□□□□□ -1.52
LIM2P55344 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.54□□□□□ -1.52
LIM2P55344 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC5.54□□□□□ -1.52
LIM2P55344 AC003682.1-201ENST00000599190 462 ntTSL 2 BASIC5.54□□□□□ -1.52
LIM2P55344 AC108865.2-201ENST00000606881 432 ntBASIC5.54□□□□□ -1.52
LIM2P55344 AL352984.2-201ENST00000611153 546 ntBASIC5.54□□□□□ -1.52
LIM2P55344 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC5.54□□□□□ -1.52
LIM2P55344 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC5.54□□□□□ -1.52
LIM2P55344 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.54□□□□□ -1.52
LIM2P55344 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
LIM2P55344 FAM197Y2-202ENST00000448006 2338 ntTSL 2 BASIC5.54□□□□□ -1.52
LIM2P55344 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
LIM2P55344 HCFC2P1-201ENST00000392864 1592 ntBASIC5.54□□□□□ -1.52
LIM2P55344 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
LIM2P55344 PDZK1P1-202ENST00000425209 1350 ntBASIC5.54□□□□□ -1.52
LIM2P55344 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
LIM2P55344 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
LIM2P55344 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.53□□□□□ -1.52
LIM2P55344 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
LIM2P55344 AC020656.2-201ENST00000613291 5309 ntBASIC5.53□□□□□ -1.52
LIM2P55344 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.53□□□□□ -1.52
LIM2P55344 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LIM2P55344 LGI1-219ENST00000636155 1618 ntTSL 5 BASIC5.53□□□□□ -1.52
LIM2P55344 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC5.53□□□□□ -1.52
LIM2P55344 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LIM2P55344 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
LIM2P55344 RNU1-150P-201ENST00000362491 162 ntBASIC5.53□□□□□ -1.52
LIM2P55344 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.53□□□□□ -1.52
LIM2P55344 MIR1203-201ENST00000408812 85 ntBASIC5.53□□□□□ -1.52
LIM2P55344 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.53□□□□□ -1.52
LIM2P55344 AL162430.2-201ENST00000422306 435 ntTSL 3 BASIC5.53□□□□□ -1.52
LIM2P55344 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.53□□□□□ -1.52
LIM2P55344 BX323845.3-201ENST00000428215 527 ntBASIC5.53□□□□□ -1.52
LIM2P55344 DEFA9P-201ENST00000433042 285 ntBASIC5.53□□□□□ -1.52
LIM2P55344 PCBP2P1-201ENST00000437262 977 ntBASIC5.53□□□□□ -1.52
LIM2P55344 AC096775.1-201ENST00000437724 448 ntBASIC5.53□□□□□ -1.52
LIM2P55344 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC5.53□□□□□ -1.52
LIM2P55344 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC5.53□□□□□ -1.52
LIM2P55344 HLA-DPA3-207ENST00000454398 229 ntBASIC5.53□□□□□ -1.52
LIM2P55344 AC093166.4-201ENST00000457867 318 ntBASIC5.53□□□□□ -1.52
LIM2P55344 RNU1-88P-201ENST00000459274 128 ntBASIC5.53□□□□□ -1.52
LIM2P55344 AC079080.1-201ENST00000479841 822 ntBASIC5.53□□□□□ -1.52
LIM2P55344 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.53□□□□□ -1.52
LIM2P55344 SNORA81.2-201ENST00000516868 170 ntBASIC5.53□□□□□ -1.52
LIM2P55344 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.53□□□□□ -1.52
LIM2P55344 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC5.53□□□□□ -1.52
LIM2P55344 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.53□□□□□ -1.52
LIM2P55344 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.53□□□□□ -1.52
LIM2P55344 OTX2-203ENST00000554559 715 ntTSL 5 BASIC5.53□□□□□ -1.52
LIM2P55344 LINC02310-201ENST00000556762 572 ntTSL 4 BASIC5.53□□□□□ -1.52
LIM2P55344 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.53□□□□□ -1.52
LIM2P55344 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC5.53□□□□□ -1.52
LIM2P55344 AC006115.2-201ENST00000596823 202 ntBASIC5.53□□□□□ -1.52
LIM2P55344 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC5.53□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms