Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
NUP98P52948 AC022819.1-201ENST00000563495 3910 ntBASIC7.08□□□□□ -1.28
NUP98P52948 AP002991.2-201ENST00000623807 2801 ntBASIC7.08□□□□□ -1.28
NUP98P52948 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
NUP98P52948 KAT6A-201ENST00000265713 9153 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
NUP98P52948 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC7.07□□□□□ -1.28
NUP98P52948 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
NUP98P52948 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC7.07□□□□□ -1.28
NUP98P52948 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC7.07□□□□□ -1.28
NUP98P52948 CC2D2A-204ENST00000503292 5175 ntAPPRIS P3 TSL 1 (best) BASIC7.07□□□□□ -1.28
NUP98P52948 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NUP98P52948 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC7.07□□□□□ -1.28
NUP98P52948 DSTNP5-201ENST00000427921 523 ntBASIC7.07□□□□□ -1.28
NUP98P52948 AL137005.1-201ENST00000452944 719 ntTSL 5 BASIC7.07□□□□□ -1.28
NUP98P52948 RPL7P6-201ENST00000480903 738 ntBASIC7.07□□□□□ -1.28
NUP98P52948 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NUP98P52948 OR5M14P-201ENST00000506803 618 ntBASIC7.07□□□□□ -1.28
NUP98P52948 PGAM1P13-201ENST00000507497 754 ntBASIC7.07□□□□□ -1.28
NUP98P52948 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NUP98P52948 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC7.07□□□□□ -1.28
NUP98P52948 AC110775.1-201ENST00000513721 462 ntBASIC7.07□□□□□ -1.28
NUP98P52948 IGLV2-28-201ENST00000520681 304 ntBASIC7.07□□□□□ -1.28
NUP98P52948 MAL2-207ENST00000522828 603 ntTSL 3 BASIC7.07□□□□□ -1.28
NUP98P52948 AC015522.1-201ENST00000523678 640 ntTSL 3 BASIC7.07□□□□□ -1.28
NUP98P52948 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC7.07□□□□□ -1.28
NUP98P52948 MRPS21P7-201ENST00000566937 238 ntBASIC7.07□□□□□ -1.28
NUP98P52948 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NUP98P52948 AC008115.3-201ENST00000614874 549 ntBASIC7.07□□□□□ -1.28
NUP98P52948 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC7.07□□□□□ -1.28
NUP98P52948 CASC19-264ENST00000641912 1184 ntBASIC7.07□□□□□ -1.28
NUP98P52948 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC7.07□□□□□ -1.28
NUP98P52948 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC7.07□□□□□ -1.28
NUP98P52948 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
NUP98P52948 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC7.07□□□□□ -1.28
NUP98P52948 CNTNAP2-203ENST00000463592 6076 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
NUP98P52948 NBPF19-206ENST00000621744 14425 ntTSL 5 BASIC7.07□□□□□ -1.28
NUP98P52948 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC7.07□□□□□ -1.28
NUP98P52948 CR383656.5-201ENST00000547616 1340 ntBASIC7.07□□□□□ -1.28
NUP98P52948 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NUP98P52948 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
NUP98P52948 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NUP98P52948 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC7.06□□□□□ -1.28
NUP98P52948 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC7.06□□□□□ -1.28
NUP98P52948 RNA5SP326-201ENST00000363209 110 ntBASIC7.06□□□□□ -1.28
NUP98P52948 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC7.06□□□□□ -1.28
NUP98P52948 HCG14-201ENST00000444986 413 ntTSL 2 BASIC7.06□□□□□ -1.28
NUP98P52948 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC7.06□□□□□ -1.28
NUP98P52948 AC015864.1-201ENST00000496512 544 ntBASIC7.06□□□□□ -1.28
NUP98P52948 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC7.06□□□□□ -1.28
NUP98P52948 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC7.06□□□□□ -1.28
NUP98P52948 HIGD1AP14-201ENST00000507617 282 ntBASIC7.06□□□□□ -1.28
NUP98P52948 AC074255.1-201ENST00000511259 501 ntBASIC7.06□□□□□ -1.28
NUP98P52948 MIR2117-201ENST00000516780 80 ntBASIC7.06□□□□□ -1.28
NUP98P52948 TACC1-210ENST00000520615 5509 ntTSL 2 BASIC7.06□□□□□ -1.28
NUP98P52948 RTL9-201ENST00000465301 5426 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
NUP98P52948 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NUP98P52948 ZNF658B-201ENST00000602828 3408 ntBASIC7.06□□□□□ -1.28
NUP98P52948 ZNF532-224ENST00000591808 5171 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
NUP98P52948 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.06□□□□□ -1.28
NUP98P52948 AC007342.5-201ENST00000571340 2142 ntBASIC7.06□□□□□ -1.28
NUP98P52948 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC7.06□□□□□ -1.28
NUP98P52948 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
NUP98P52948 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NUP98P52948 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NUP98P52948 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
NUP98P52948 RNA5SP507-201ENST00000363603 121 ntBASIC7.06□□□□□ -1.28
NUP98P52948 AL589647.1-201ENST00000402485 466 ntBASIC7.06□□□□□ -1.28
NUP98P52948 AL390774.1-201ENST00000411924 246 ntBASIC7.06□□□□□ -1.28
NUP98P52948 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC7.06□□□□□ -1.28
NUP98P52948 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC7.06□□□□□ -1.28
NUP98P52948 AC078878.1-201ENST00000539832 958 ntBASIC7.06□□□□□ -1.28
NUP98P52948 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC7.06□□□□□ -1.28
NUP98P52948 AL137246.2-201ENST00000613439 662 ntBASIC7.06□□□□□ -1.28
NUP98P52948 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC7.06□□□□□ -1.28
NUP98P52948 CYP4F35P-202ENST00000636121 390 ntBASIC7.06□□□□□ -1.28
NUP98P52948 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC7.06□□□□□ -1.28
NUP98P52948 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
NUP98P52948 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
NUP98P52948 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC7.06□□□□□ -1.28
NUP98P52948 AC005725.1-201ENST00000577346 2607 ntBASIC7.05□□□□□ -1.28
NUP98P52948 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC7.05□□□□□ -1.28
NUP98P52948 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7.05□□□□□ -1.28
NUP98P52948 UG0898H09-202ENST00000623646 7040 ntBASIC7.05□□□□□ -1.28
NUP98P52948 SF3B1-201ENST00000335508 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NUP98P52948 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NUP98P52948 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC7.05□□□□□ -1.28
NUP98P52948 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC7.05□□□□□ -1.28
NUP98P52948 LINC01297-204ENST00000621052 4222 ntTSL 5 BASIC7.05□□□□□ -1.28
NUP98P52948 NEK11-201ENST00000356918 1874 ntAPPRIS ALT2 TSL 5 BASIC7.05□□□□□ -1.28
NUP98P52948 CORIN-201ENST00000273857 4852 ntAPPRIS P2 TSL 1 (best) BASIC7.05□□□□□ -1.28
NUP98P52948 U8.4-201ENST00000363626 134 ntBASIC7.05□□□□□ -1.28
NUP98P52948 SNORA70-201ENST00000384436 135 ntBASIC7.05□□□□□ -1.28
NUP98P52948 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC7.05□□□□□ -1.28
NUP98P52948 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC7.05□□□□□ -1.28
NUP98P52948 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC7.05□□□□□ -1.28
NUP98P52948 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC7.05□□□□□ -1.28
NUP98P52948 AC004815.1-201ENST00000484185 331 ntBASIC7.05□□□□□ -1.28
NUP98P52948 AC093763.2-201ENST00000505334 1223 ntBASIC7.05□□□□□ -1.28
NUP98P52948 MYLK-AS2-201ENST00000510827 500 ntTSL 3 BASIC7.05□□□□□ -1.28
NUP98P52948 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC7.05□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 105 ms