Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 AP001357.1-201ENST00000586304 1053 ntBASIC6.83□□□□□ -1.32
NEDD4P46934 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.83□□□□□ -1.32
NEDD4P46934 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.83□□□□□ -1.32
NEDD4P46934 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
NEDD4P46934 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
NEDD4P46934 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
NEDD4P46934 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.83□□□□□ -1.32
NEDD4P46934 LINC00906-206ENST00000589921 3444 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
NEDD4P46934 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.83□□□□□ -1.32
NEDD4P46934 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.83□□□□□ -1.32
NEDD4P46934 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.83□□□□□ -1.32
NEDD4P46934 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
NEDD4P46934 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.83□□□□□ -1.32
NEDD4P46934 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
NEDD4P46934 Z95114.1-201ENST00000624264 14574 ntBASIC6.83□□□□□ -1.32
NEDD4P46934 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
NEDD4P46934 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NEDD4P46934 DCC-203ENST00000442544 10206 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
NEDD4P46934 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
NEDD4P46934 ANAPC10-201ENST00000309439 868 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
NEDD4P46934 MIR375-201ENST00000362103 64 ntBASIC6.82□□□□□ -1.32
NEDD4P46934 MIR130A-201ENST00000385274 89 ntBASIC6.82□□□□□ -1.32
NEDD4P46934 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
NEDD4P46934 HMGB1P20-201ENST00000402555 677 ntBASIC6.82□□□□□ -1.32
NEDD4P46934 AL590399.2-201ENST00000427536 309 ntBASIC6.82□□□□□ -1.32
NEDD4P46934 RPL23AP19-201ENST00000436229 369 ntBASIC6.82□□□□□ -1.32
NEDD4P46934 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC6.82□□□□□ -1.32
NEDD4P46934 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NEDD4P46934 AC099521.1-201ENST00000482557 334 ntBASIC6.82□□□□□ -1.32
NEDD4P46934 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.82□□□□□ -1.32
NEDD4P46934 snoU109.5-201ENST00000516231 132 ntBASIC6.82□□□□□ -1.32
NEDD4P46934 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC6.82□□□□□ -1.32
NEDD4P46934 DPPA3P2-201ENST00000553589 478 ntBASIC6.82□□□□□ -1.32
NEDD4P46934 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC6.82□□□□□ -1.32
NEDD4P46934 AC096996.1-201ENST00000563813 325 ntBASIC6.82□□□□□ -1.32
NEDD4P46934 MIR4310-201ENST00000582950 57 ntBASIC6.82□□□□□ -1.32
NEDD4P46934 AC008521.2-201ENST00000591021 259 ntBASIC6.82□□□□□ -1.32
NEDD4P46934 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.82□□□□□ -1.32
NEDD4P46934 ZNF418-210ENST00000600989 597 ntTSL 5 BASIC6.82□□□□□ -1.32
NEDD4P46934 AC093388.1-201ENST00000609166 430 ntBASIC6.82□□□□□ -1.32
NEDD4P46934 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC6.82□□□□□ -1.32
NEDD4P46934 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC6.82□□□□□ -1.32
NEDD4P46934 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NEDD4P46934 UPF2-201ENST00000356352 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
NEDD4P46934 SETX-201ENST00000224140 11100 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
NEDD4P46934 AC011933.2-201ENST00000578539 2790 ntBASIC6.82□□□□□ -1.32
NEDD4P46934 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
NEDD4P46934 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
NEDD4P46934 OR13C1P-202ENST00000641378 2919 ntBASIC6.82□□□□□ -1.32
NEDD4P46934 AC106872.5-201ENST00000508856 1416 ntBASIC6.82□□□□□ -1.32
NEDD4P46934 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
NEDD4P46934 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.82□□□□□ -1.32
NEDD4P46934 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
NEDD4P46934 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NEDD4P46934 AC015689.2-201ENST00000528172 1738 ntBASIC6.81□□□□□ -1.32
NEDD4P46934 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.81□□□□□ -1.32
NEDD4P46934 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC6.81□□□□□ -1.32
NEDD4P46934 SNORA64.1-201ENST00000362600 132 ntBASIC6.81□□□□□ -1.32
NEDD4P46934 RNA5SP394-201ENST00000364216 119 ntBASIC6.81□□□□□ -1.32
NEDD4P46934 RNA5SP91-201ENST00000390902 119 ntBASIC6.81□□□□□ -1.32
NEDD4P46934 SEPT7P2-202ENST00000398921 823 ntBASIC6.81□□□□□ -1.32
NEDD4P46934 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.81□□□□□ -1.32
NEDD4P46934 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.81□□□□□ -1.32
NEDD4P46934 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.81□□□□□ -1.32
NEDD4P46934 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC6.81□□□□□ -1.32
NEDD4P46934 LINC02528-202ENST00000434437 535 ntTSL 2 BASIC6.81□□□□□ -1.32
NEDD4P46934 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.81□□□□□ -1.32
NEDD4P46934 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NEDD4P46934 AC073610.1-201ENST00000489971 396 ntBASIC6.81□□□□□ -1.32
NEDD4P46934 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.81□□□□□ -1.32
NEDD4P46934 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC6.81□□□□□ -1.32
NEDD4P46934 AP003080.1-202ENST00000526526 915 ntBASIC6.81□□□□□ -1.32
NEDD4P46934 AL121594.2-201ENST00000541658 472 ntBASIC6.81□□□□□ -1.32
NEDD4P46934 HSPE1P2-201ENST00000554777 306 ntBASIC6.81□□□□□ -1.32
NEDD4P46934 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.81□□□□□ -1.32
NEDD4P46934 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC6.81□□□□□ -1.32
NEDD4P46934 MIR3614-201ENST00000581261 86 ntBASIC6.81□□□□□ -1.32
NEDD4P46934 AC006115.2-201ENST00000596823 202 ntBASIC6.81□□□□□ -1.32
NEDD4P46934 AL049840.6-201ENST00000604583 345 ntBASIC6.81□□□□□ -1.32
NEDD4P46934 AL352984.2-201ENST00000611153 546 ntBASIC6.81□□□□□ -1.32
NEDD4P46934 RN7SL544P-201ENST00000617232 284 ntBASIC6.81□□□□□ -1.32
NEDD4P46934 RN7SL763P-201ENST00000620922 284 ntBASIC6.81□□□□□ -1.32
NEDD4P46934 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC6.81□□□□□ -1.32
NEDD4P46934 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NEDD4P46934 GTF2IP4-201ENST00000453092 2054 ntBASIC6.81□□□□□ -1.32
NEDD4P46934 PDE4D-226ENST00000546160 7690 ntTSL 5 BASIC6.81□□□□□ -1.32
NEDD4P46934 CTBS-202ENST00000370630 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NEDD4P46934 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
NEDD4P46934 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
NEDD4P46934 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.81□□□□□ -1.32
NEDD4P46934 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
NEDD4P46934 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.81□□□□□ -1.32
NEDD4P46934 AC140479.2-201ENST00000421567 3130 ntBASIC6.81□□□□□ -1.32
NEDD4P46934 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.81□□□□□ -1.32
NEDD4P46934 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
NEDD4P46934 KYNUP3-201ENST00000574386 1341 ntBASIC6.81□□□□□ -1.32
NEDD4P46934 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC6.81□□□□□ -1.32
NEDD4P46934 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.81□□□□□ -1.32
NEDD4P46934 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
NEDD4P46934 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 148.1 ms