Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC104164.1-201ENST00000460282 590 ntBASIC6.27□□□□□ -1.41
PTPN9P43378 AC104339.1-201ENST00000465478 348 ntBASIC6.27□□□□□ -1.41
PTPN9P43378 AC092865.4-201ENST00000477936 615 ntBASIC6.27□□□□□ -1.41
PTPN9P43378 OR2A3P-201ENST00000493774 953 ntBASIC6.27□□□□□ -1.41
PTPN9P43378 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PTPN9P43378 AC122718.2-201ENST00000505325 591 ntBASIC6.27□□□□□ -1.41
PTPN9P43378 AL158068.1-201ENST00000506116 616 ntBASIC6.27□□□□□ -1.41
PTPN9P43378 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC6.27□□□□□ -1.41
PTPN9P43378 AC013724.1-201ENST00000511962 783 ntTSL 2 BASIC6.27□□□□□ -1.41
PTPN9P43378 HAND2-AS1-233ENST00000515345 797 ntTSL 3 BASIC6.27□□□□□ -1.41
PTPN9P43378 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC6.27□□□□□ -1.41
PTPN9P43378 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC6.27□□□□□ -1.41
PTPN9P43378 AC084121.1-201ENST00000533882 835 ntBASIC6.27□□□□□ -1.41
PTPN9P43378 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC6.27□□□□□ -1.41
PTPN9P43378 AC007298.1-201ENST00000547346 656 ntTSL 3 BASIC6.27□□□□□ -1.41
PTPN9P43378 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC6.27□□□□□ -1.41
PTPN9P43378 LINC00871-202ENST00000556071 554 ntTSL 3 BASIC6.27□□□□□ -1.41
PTPN9P43378 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.27□□□□□ -1.41
PTPN9P43378 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.27□□□□□ -1.41
PTPN9P43378 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
PTPN9P43378 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.27□□□□□ -1.41
PTPN9P43378 RPL21P136-201ENST00000605378 396 ntBASIC6.27□□□□□ -1.41
PTPN9P43378 AP001437.1-201ENST00000608783 456 ntBASIC6.27□□□□□ -1.41
PTPN9P43378 AC092266.1-201ENST00000610958 165 ntBASIC6.27□□□□□ -1.41
PTPN9P43378 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.27□□□□□ -1.41
PTPN9P43378 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC6.27□□□□□ -1.41
PTPN9P43378 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
PTPN9P43378 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
PTPN9P43378 AL354854.1-201ENST00000455940 1363 ntBASIC6.27□□□□□ -1.41
PTPN9P43378 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PTPN9P43378 AC104966.1-201ENST00000467010 1464 ntBASIC6.27□□□□□ -1.41
PTPN9P43378 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
PTPN9P43378 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
PTPN9P43378 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
PTPN9P43378 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.26□□□□□ -1.41
PTPN9P43378 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.26□□□□□ -1.41
PTPN9P43378 SAMD13-201ENST00000370668 1403 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PTPN9P43378 RBPJP7-201ENST00000442803 1447 ntBASIC6.26□□□□□ -1.41
PTPN9P43378 RBPJP5-201ENST00000449433 1447 ntBASIC6.26□□□□□ -1.41
PTPN9P43378 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PTPN9P43378 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PTPN9P43378 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.26□□□□□ -1.41
PTPN9P43378 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.26□□□□□ -1.41
PTPN9P43378 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
PTPN9P43378 AJ009632.2-208ENST00000635525 4123 ntTSL 5 BASIC6.26□□□□□ -1.41
PTPN9P43378 AC139426.3-201ENST00000605648 2059 ntBASIC6.26□□□□□ -1.41
PTPN9P43378 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.26□□□□□ -1.41
PTPN9P43378 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC6.26□□□□□ -1.41
PTPN9P43378 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
PTPN9P43378 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC6.26□□□□□ -1.41
PTPN9P43378 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
PTPN9P43378 MIR7-1-201ENST00000384871 110 ntBASIC6.26□□□□□ -1.41
PTPN9P43378 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PTPN9P43378 RPL35AP3-201ENST00000414680 288 ntBASIC6.26□□□□□ -1.41
PTPN9P43378 MIRLET7DHG-201ENST00000416309 1294 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PTPN9P43378 KIF4CP-201ENST00000422742 1279 ntBASIC6.26□□□□□ -1.41
PTPN9P43378 MTCO1P57-201ENST00000432182 261 ntBASIC6.26□□□□□ -1.41
PTPN9P43378 RPL6P30-201ENST00000443382 862 ntBASIC6.26□□□□□ -1.41
PTPN9P43378 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.26□□□□□ -1.41
PTPN9P43378 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC6.26□□□□□ -1.41
PTPN9P43378 AC009963.3-201ENST00000458090 486 ntBASIC6.26□□□□□ -1.41
PTPN9P43378 ACA64.4-201ENST00000459070 127 ntBASIC6.26□□□□□ -1.41
PTPN9P43378 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC6.26□□□□□ -1.41
PTPN9P43378 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.26□□□□□ -1.41
PTPN9P43378 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC6.26□□□□□ -1.41
PTPN9P43378 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PTPN9P43378 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
PTPN9P43378 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC6.26□□□□□ -1.41
PTPN9P43378 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.26□□□□□ -1.41
PTPN9P43378 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC6.26□□□□□ -1.41
PTPN9P43378 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.26□□□□□ -1.41
PTPN9P43378 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.26□□□□□ -1.41
PTPN9P43378 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.26□□□□□ -1.41
PTPN9P43378 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.26□□□□□ -1.41
PTPN9P43378 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.26□□□□□ -1.41
PTPN9P43378 AC005972.3-201ENST00000606304 481 ntBASIC6.26□□□□□ -1.41
PTPN9P43378 AC015802.5-201ENST00000607478 399 ntBASIC6.26□□□□□ -1.41
PTPN9P43378 uc_338.26-201ENST00000612659 160 ntBASIC6.26□□□□□ -1.41
PTPN9P43378 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
PTPN9P43378 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.26□□□□□ -1.41
PTPN9P43378 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.26□□□□□ -1.41
PTPN9P43378 CTAGE5-204ENST00000341749 2912 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PTPN9P43378 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
PTPN9P43378 AC024341.1-201ENST00000526444 1552 ntBASIC6.26□□□□□ -1.41
PTPN9P43378 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.26□□□□□ -1.41
PTPN9P43378 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.26□□□□□ -1.41
PTPN9P43378 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PTPN9P43378 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PTPN9P43378 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PTPN9P43378 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
PTPN9P43378 AC012254.3-201ENST00000591183 2117 ntBASIC6.25□□□□□ -1.41
PTPN9P43378 MMP13-201ENST00000260302 2716 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PTPN9P43378 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PTPN9P43378 RNU6-670P-201ENST00000364312 104 ntBASIC6.25□□□□□ -1.41
PTPN9P43378 MIR130B-202ENST00000385018 82 ntBASIC6.25□□□□□ -1.41
PTPN9P43378 AL607077.1-201ENST00000401718 499 ntBASIC6.25□□□□□ -1.41
PTPN9P43378 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
PTPN9P43378 RNA5SP431-201ENST00000410312 120 ntBASIC6.25□□□□□ -1.41
PTPN9P43378 RNU6-564P-201ENST00000410983 104 ntBASIC6.25□□□□□ -1.41
PTPN9P43378 RPL23AP18-201ENST00000416139 468 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 72.4 ms