Protein–RNA interactions for Protein: P42858

HTT, Huntingtin, humanhuman

Predictions only

Length 3,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTTP42858 AC107980.1-201ENST00000558671 3355 ntBASIC6.09□□□□□ -1.43
HTTP42858 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HTTP42858 ZNF776-201ENST00000317178 5292 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HTTP42858 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HTTP42858 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HTTP42858 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HTTP42858 ELOCP19-201ENST00000411919 318 ntBASIC6.09□□□□□ -1.43
HTTP42858 AC092811.1-201ENST00000428642 397 ntTSL 3 BASIC6.09□□□□□ -1.43
HTTP42858 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
HTTP42858 RN7SL352P-201ENST00000466002 277 ntBASIC6.09□□□□□ -1.43
HTTP42858 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC6.09□□□□□ -1.43
HTTP42858 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC6.09□□□□□ -1.43
HTTP42858 AC005000.1-201ENST00000536192 288 ntBASIC6.09□□□□□ -1.43
HTTP42858 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
HTTP42858 PARP1P2-201ENST00000556806 195 ntBASIC6.09□□□□□ -1.43
HTTP42858 AC019193.2-201ENST00000610012 634 ntBASIC6.09□□□□□ -1.43
HTTP42858 AC015660.5-201ENST00000623238 564 ntBASIC6.09□□□□□ -1.43
HTTP42858 COL11A1-203ENST00000370096 7286 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
HTTP42858 FRMPD3-201ENST00000276185 7304 ntAPPRIS P2 TSL 5 BASIC6.09□□□□□ -1.43
HTTP42858 PCGF5-201ENST00000336126 7018 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
HTTP42858 CTNND1-210ENST00000524630 6553 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
HTTP42858 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.09□□□□□ -1.43
HTTP42858 AMD1-203ENST00000368882 3059 ntTSL 2 BASIC6.09□□□□□ -1.43
HTTP42858 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
HTTP42858 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
HTTP42858 OR5B12-201ENST00000302572 1054 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
HTTP42858 AL590723.1-201ENST00000426030 629 ntTSL 5 BASIC6.09□□□□□ -1.43
HTTP42858 AC093414.1-201ENST00000434712 514 ntBASIC6.09□□□□□ -1.43
HTTP42858 AL672138.1-201ENST00000450604 1015 ntBASIC6.09□□□□□ -1.43
HTTP42858 AC097484.1-201ENST00000471148 389 ntBASIC6.09□□□□□ -1.43
HTTP42858 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.09□□□□□ -1.43
HTTP42858 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.44
HTTP42858 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
HTTP42858 VEGFD-201ENST00000297904 2037 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
HTTP42858 TECTA-202ENST00000392793 7426 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
HTTP42858 CASC19-205ENST00000641013 1411 ntBASIC6.09□□□□□ -1.44
HTTP42858 GOLGA6L22-204ENST00000622895 4178 ntAPPRIS P5 TSL 5 BASIC6.08□□□□□ -1.44
HTTP42858 AC087280.2-201ENST00000637205 4822 ntTSL 5 BASIC6.08□□□□□ -1.44
HTTP42858 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HTTP42858 MTAP-201ENST00000380172 6122 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HTTP42858 MAT2B-201ENST00000280969 2226 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HTTP42858 AL162739.1-201ENST00000450606 307 ntBASIC6.08□□□□□ -1.44
HTTP42858 AC068522.1-201ENST00000482895 345 ntBASIC6.08□□□□□ -1.44
HTTP42858 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.08□□□□□ -1.44
HTTP42858 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC6.08□□□□□ -1.44
HTTP42858 CYP4F27P-201ENST00000514557 494 ntBASIC6.08□□□□□ -1.44
HTTP42858 AC073581.1-201ENST00000519036 575 ntBASIC6.08□□□□□ -1.44
HTTP42858 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC6.08□□□□□ -1.44
HTTP42858 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.08□□□□□ -1.44
HTTP42858 AP000769.2-201ENST00000602344 396 ntBASIC6.08□□□□□ -1.44
HTTP42858 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC6.08□□□□□ -1.44
HTTP42858 ERN1-201ENST00000433197 7876 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HTTP42858 AL078621.3-201ENST00000623707 2042 ntBASIC6.08□□□□□ -1.44
HTTP42858 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
HTTP42858 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC6.08□□□□□ -1.44
HTTP42858 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
HTTP42858 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HTTP42858 KYNUP3-201ENST00000574386 1341 ntBASIC6.08□□□□□ -1.44
HTTP42858 NEK1-208ENST00000512193 4430 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
HTTP42858 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC6.08□□□□□ -1.44
HTTP42858 THSD7B-203ENST00000413152 5846 ntTSL 5 BASIC6.08□□□□□ -1.44
HTTP42858 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC6.08□□□□□ -1.44
HTTP42858 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HTTP42858 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HTTP42858 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
HTTP42858 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.08□□□□□ -1.44
HTTP42858 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HTTP42858 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC6.08□□□□□ -1.44
HTTP42858 RBMY2TP-201ENST00000451162 947 ntBASIC6.08□□□□□ -1.44
HTTP42858 RPS4XP20-201ENST00000505751 772 ntBASIC6.08□□□□□ -1.44
HTTP42858 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC6.08□□□□□ -1.44
HTTP42858 EIF3KP3-201ENST00000514461 639 ntBASIC6.08□□□□□ -1.44
HTTP42858 AL445423.1-201ENST00000609941 536 ntBASIC6.08□□□□□ -1.44
HTTP42858 IQCB2P-201ENST00000401788 1633 ntBASIC6.08□□□□□ -1.44
HTTP42858 AL353763.1-201ENST00000624467 1628 ntBASIC6.08□□□□□ -1.44
HTTP42858 AL353795.3-201ENST00000624351 5702 ntBASIC6.08□□□□□ -1.44
HTTP42858 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HTTP42858 MYH1-201ENST00000226207 6024 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
HTTP42858 EYA4-203ENST00000367895 5699 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
HTTP42858 KIAA0319-206ENST00000616673 5315 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HTTP42858 LINC01920-201ENST00000441356 2528 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HTTP42858 CC2D2A-202ENST00000424120 5249 ntAPPRIS P3 TSL 5 BASIC6.08□□□□□ -1.44
HTTP42858 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HTTP42858 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HTTP42858 PDPR-201ENST00000288050 9255 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
HTTP42858 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
HTTP42858 AL591848.1-201ENST00000413092 322 ntBASIC6.08□□□□□ -1.44
HTTP42858 AC239367.2-201ENST00000447309 705 ntBASIC6.08□□□□□ -1.44
HTTP42858 IGHVII-44-2-201ENST00000517728 250 ntBASIC6.08□□□□□ -1.44
HTTP42858 AC009597.2-201ENST00000604659 592 ntBASIC6.08□□□□□ -1.44
HTTP42858 AP005432.2-201ENST00000608162 586 ntBASIC6.08□□□□□ -1.44
HTTP42858 HSPA4L-201ENST00000296464 10790 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HTTP42858 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.07□□□□□ -1.44
HTTP42858 PCDH15-226ENST00000613657 6329 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
HTTP42858 SESN1-201ENST00000302071 2718 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HTTP42858 MAPK6-201ENST00000261845 5345 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HTTP42858 SELE-201ENST00000333360 3857 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HTTP42858 ZHX3-211ENST00000544979 3933 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
HTTP42858 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
HTTP42858 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 95.1 ms