Protein–RNA interactions for Protein: P35499

SCN4A, Sodium channel protein type 4 subunit alpha, humanhuman

Predictions only

Length 1,836 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4AP35499 SGO1-205ENST00000419233 1582 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SCN4AP35499 ODF2L-203ENST00000359242 7560 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SCN4AP35499 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC6.88□□□□□ -1.31
SCN4AP35499 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.88□□□□□ -1.31
SCN4AP35499 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
SCN4AP35499 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SCN4AP35499 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.88□□□□□ -1.31
SCN4AP35499 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.88□□□□□ -1.31
SCN4AP35499 AC006466.1-201ENST00000438721 289 ntBASIC6.88□□□□□ -1.31
SCN4AP35499 AC023141.8-201ENST00000442554 208 ntBASIC6.88□□□□□ -1.31
SCN4AP35499 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SCN4AP35499 RPS27AP3-201ENST00000453803 454 ntBASIC6.88□□□□□ -1.31
SCN4AP35499 RN7SL570P-201ENST00000484405 292 ntBASIC6.88□□□□□ -1.31
SCN4AP35499 AC025187.1-201ENST00000506305 686 ntTSL 3 BASIC6.88□□□□□ -1.31
SCN4AP35499 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC6.88□□□□□ -1.31
SCN4AP35499 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC6.88□□□□□ -1.31
SCN4AP35499 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
SCN4AP35499 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC6.88□□□□□ -1.31
SCN4AP35499 PRELID3BP3-201ENST00000584963 545 ntBASIC6.88□□□□□ -1.31
SCN4AP35499 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC6.88□□□□□ -1.31
SCN4AP35499 FAM25E-202ENST00000608562 189 ntBASIC6.88□□□□□ -1.31
SCN4AP35499 MIR7641-1-201ENST00000627518 61 ntBASIC6.88□□□□□ -1.31
SCN4AP35499 OLFM3-202ENST00000370103 3255 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
SCN4AP35499 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC6.88□□□□□ -1.31
SCN4AP35499 NBPF26-204ENST00000615145 2656 ntTSL 5 BASIC6.88□□□□□ -1.31
SCN4AP35499 CXCR2-201ENST00000318507 2879 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
SCN4AP35499 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.88□□□□□ -1.31
SCN4AP35499 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SCN4AP35499 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SCN4AP35499 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
SCN4AP35499 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.88□□□□□ -1.31
SCN4AP35499 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
SCN4AP35499 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
SCN4AP35499 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC6.88□□□□□ -1.31
SCN4AP35499 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
SCN4AP35499 AC021078.1-201ENST00000499521 8636 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
SCN4AP35499 ZNF254-206ENST00000611359 3982 ntTSL 3 BASIC6.88□□□□□ -1.31
SCN4AP35499 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
SCN4AP35499 RNA5SP335-201ENST00000363817 110 ntBASIC6.87□□□□□ -1.31
SCN4AP35499 U3.36-201ENST00000408418 213 ntBASIC6.87□□□□□ -1.31
SCN4AP35499 RMRPP5-201ENST00000411156 267 ntBASIC6.87□□□□□ -1.31
SCN4AP35499 AL357752.1-201ENST00000412817 349 ntBASIC6.87□□□□□ -1.31
SCN4AP35499 AC018467.1-203ENST00000440785 506 ntTSL 3 BASIC6.87□□□□□ -1.31
SCN4AP35499 RN7SL51P-201ENST00000468230 285 ntBASIC6.87□□□□□ -1.31
SCN4AP35499 SNRPCP2-201ENST00000504370 475 ntBASIC6.87□□□□□ -1.31
SCN4AP35499 AC106864.2-201ENST00000505632 740 ntTSL 2 BASIC6.87□□□□□ -1.31
SCN4AP35499 RN7SKP288-201ENST00000516227 268 ntBASIC6.87□□□□□ -1.31
SCN4AP35499 AC021678.3-201ENST00000517893 476 ntBASIC6.87□□□□□ -1.31
SCN4AP35499 AP004607.2-201ENST00000533949 322 ntBASIC6.87□□□□□ -1.31
SCN4AP35499 AC016987.1-201ENST00000558587 499 ntTSL 2 BASIC6.87□□□□□ -1.31
SCN4AP35499 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
SCN4AP35499 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
SCN4AP35499 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
SCN4AP35499 LRRC37A9P-201ENST00000603850 5376 ntBASIC6.87□□□□□ -1.31
SCN4AP35499 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.87□□□□□ -1.31
SCN4AP35499 ANO6-201ENST00000320560 5975 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
SCN4AP35499 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.87□□□□□ -1.31
SCN4AP35499 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC6.87□□□□□ -1.31
SCN4AP35499 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SCN4AP35499 AC073342.2-201ENST00000595842 1800 ntBASIC6.87□□□□□ -1.31
SCN4AP35499 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SCN4AP35499 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SCN4AP35499 HTR2C-202ENST00000371950 4652 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SCN4AP35499 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
SCN4AP35499 ZNF573-202ENST00000357309 2124 ntTSL 5 BASIC6.87□□□□□ -1.31
SCN4AP35499 ZNF146-201ENST00000443387 3326 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SCN4AP35499 CSDE1-218ENST00000610726 4312 ntTSL 5 BASIC6.87□□□□□ -1.31
SCN4AP35499 AC093829.1-201ENST00000506662 1618 ntBASIC6.87□□□□□ -1.31
SCN4AP35499 NHS-202ENST00000398097 8213 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
SCN4AP35499 AC022034.1-201ENST00000512867 2156 ntBASIC6.87□□□□□ -1.31
SCN4AP35499 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC6.87□□□□□ -1.31
SCN4AP35499 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC6.87□□□□□ -1.31
SCN4AP35499 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
SCN4AP35499 RNA5SP251-201ENST00000410614 137 ntBASIC6.87□□□□□ -1.31
SCN4AP35499 OR13K1P-201ENST00000444577 975 ntBASIC6.87□□□□□ -1.31
SCN4AP35499 RPL7P45-201ENST00000455851 743 ntBASIC6.87□□□□□ -1.31
SCN4AP35499 RPS3AP41-201ENST00000462701 778 ntBASIC6.87□□□□□ -1.31
SCN4AP35499 RN7SL738P-201ENST00000470264 297 ntBASIC6.87□□□□□ -1.31
SCN4AP35499 AC109462.1-201ENST00000491087 368 ntBASIC6.87□□□□□ -1.31
SCN4AP35499 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC6.87□□□□□ -1.31
SCN4AP35499 AC087360.1-201ENST00000518788 616 ntBASIC6.87□□□□□ -1.31
SCN4AP35499 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.87□□□□□ -1.31
SCN4AP35499 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.87□□□□□ -1.31
SCN4AP35499 RBM22P1-201ENST00000578589 1214 ntBASIC6.87□□□□□ -1.31
SCN4AP35499 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.87□□□□□ -1.31
SCN4AP35499 AC013488.1-201ENST00000526618 1838 ntBASIC6.87□□□□□ -1.31
SCN4AP35499 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.87□□□□□ -1.31
SCN4AP35499 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SCN4AP35499 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
SCN4AP35499 MED28-201ENST00000237380 10868 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SCN4AP35499 AL117378.2-201ENST00000622916 1337 ntBASIC6.86□□□□□ -1.31
SCN4AP35499 COL24A1-201ENST00000370571 6825 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
SCN4AP35499 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SCN4AP35499 PNPLA4-204ENST00000537427 2559 ntTSL 2 BASIC6.86□□□□□ -1.31
SCN4AP35499 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC6.86□□□□□ -1.31
SCN4AP35499 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
SCN4AP35499 PAX6-270ENST00000640368 6975 ntAPPRIS P4 TSL 5 BASIC6.86□□□□□ -1.31
SCN4AP35499 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.86□□□□□ -1.31
SCN4AP35499 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
SCN4AP35499 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC6.86□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 126.2 ms