Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHMT2P34897 GEMIN2P1-201ENST00000454246 752 ntBASIC5.8□□□□□ -1.48
SHMT2P34897 ACA64.1-201ENST00000459171 127 ntBASIC5.8□□□□□ -1.48
SHMT2P34897 NDUFA5P5-201ENST00000468361 342 ntBASIC5.8□□□□□ -1.48
SHMT2P34897 AC094085.1-201ENST00000468914 584 ntBASIC5.8□□□□□ -1.48
SHMT2P34897 RN7SL284P-201ENST00000498823 275 ntBASIC5.8□□□□□ -1.48
SHMT2P34897 AC008629.2-201ENST00000503783 483 ntBASIC5.8□□□□□ -1.48
SHMT2P34897 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC5.8□□□□□ -1.48
SHMT2P34897 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.8□□□□□ -1.48
SHMT2P34897 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.8□□□□□ -1.48
SHMT2P34897 OR5H7P-201ENST00000514084 930 ntBASIC5.8□□□□□ -1.48
SHMT2P34897 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.8□□□□□ -1.48
SHMT2P34897 TRIM77BP-201ENST00000524985 1119 ntBASIC5.8□□□□□ -1.48
SHMT2P34897 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHMT2P34897 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.8□□□□□ -1.48
SHMT2P34897 DPPA3P2-202ENST00000557188 1219 ntBASIC5.8□□□□□ -1.48
SHMT2P34897 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC5.8□□□□□ -1.48
SHMT2P34897 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.8□□□□□ -1.48
SHMT2P34897 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.8□□□□□ -1.48
SHMT2P34897 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC5.8□□□□□ -1.48
SHMT2P34897 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC5.8□□□□□ -1.48
SHMT2P34897 OR7A8P-201ENST00000595427 913 ntBASIC5.8□□□□□ -1.48
SHMT2P34897 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.8□□□□□ -1.48
SHMT2P34897 AC022400.9-201ENST00000623633 273 ntBASIC5.8□□□□□ -1.48
SHMT2P34897 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.8□□□□□ -1.48
SHMT2P34897 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC5.8□□□□□ -1.48
SHMT2P34897 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHMT2P34897 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHMT2P34897 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
SHMT2P34897 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC5.8□□□□□ -1.48
SHMT2P34897 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.8□□□□□ -1.48
SHMT2P34897 AC114876.1-201ENST00000490962 1366 ntBASIC5.8□□□□□ -1.48
SHMT2P34897 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.8□□□□□ -1.48
SHMT2P34897 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.8□□□□□ -1.48
SHMT2P34897 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC5.79□□□□□ -1.48
SHMT2P34897 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC5.79□□□□□ -1.48
SHMT2P34897 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SHMT2P34897 AL162456.1-201ENST00000634535 2006 ntBASIC5.79□□□□□ -1.48
SHMT2P34897 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.79□□□□□ -1.48
SHMT2P34897 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHMT2P34897 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
SHMT2P34897 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHMT2P34897 SLC38A1-211ENST00000612161 1607 ntTSL 5 BASIC5.79□□□□□ -1.48
SHMT2P34897 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
SHMT2P34897 RNA5SP477-201ENST00000362639 119 ntBASIC5.79□□□□□ -1.48
SHMT2P34897 AL096711.1-201ENST00000404780 554 ntBASIC5.79□□□□□ -1.48
SHMT2P34897 MIR1282-201ENST00000408865 101 ntBASIC5.79□□□□□ -1.48
SHMT2P34897 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.79□□□□□ -1.48
SHMT2P34897 BX284632.2-201ENST00000421091 399 ntBASIC5.79□□□□□ -1.48
SHMT2P34897 AC099677.3-201ENST00000427081 395 ntBASIC5.79□□□□□ -1.48
SHMT2P34897 EIF5AP4-201ENST00000441206 465 ntBASIC5.79□□□□□ -1.48
SHMT2P34897 AL512605.1-202ENST00000441919 381 ntBASIC5.79□□□□□ -1.48
SHMT2P34897 RPS7P3-201ENST00000443360 580 ntBASIC5.79□□□□□ -1.48
SHMT2P34897 AL359955.2-201ENST00000445380 353 ntBASIC5.79□□□□□ -1.48
SHMT2P34897 AL162739.1-201ENST00000450606 307 ntBASIC5.79□□□□□ -1.48
SHMT2P34897 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC5.79□□□□□ -1.48
SHMT2P34897 RN7SL269P-201ENST00000467795 305 ntBASIC5.79□□□□□ -1.48
SHMT2P34897 AL122020.1-201ENST00000472287 459 ntBASIC5.79□□□□□ -1.48
SHMT2P34897 AC117386.1-201ENST00000474444 606 ntTSL 4 BASIC5.79□□□□□ -1.48
SHMT2P34897 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SHMT2P34897 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.79□□□□□ -1.48
SHMT2P34897 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.79□□□□□ -1.48
SHMT2P34897 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.79□□□□□ -1.48
SHMT2P34897 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.79□□□□□ -1.48
SHMT2P34897 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC5.79□□□□□ -1.48
SHMT2P34897 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.79□□□□□ -1.48
SHMT2P34897 MIR4776-2-201ENST00000580204 80 ntBASIC5.79□□□□□ -1.48
SHMT2P34897 AC025857.2-201ENST00000602711 238 ntBASIC5.79□□□□□ -1.48
SHMT2P34897 AC108865.2-201ENST00000606881 432 ntBASIC5.79□□□□□ -1.48
SHMT2P34897 AL021918.2-201ENST00000613415 194 ntBASIC5.79□□□□□ -1.48
SHMT2P34897 AL096712.1-201ENST00000614561 159 ntBASIC5.79□□□□□ -1.48
SHMT2P34897 AL589935.2-201ENST00000616471 1231 ntBASIC5.79□□□□□ -1.48
SHMT2P34897 FO681491.1-202ENST00000623392 737 ntBASIC5.79□□□□□ -1.48
SHMT2P34897 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHMT2P34897 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.79□□□□□ -1.48
SHMT2P34897 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
SHMT2P34897 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHMT2P34897 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SHMT2P34897 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
SHMT2P34897 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHMT2P34897 AF287957.1-201ENST00000607368 1595 ntBASIC5.79□□□□□ -1.48
SHMT2P34897 XKRY2-202ENST00000623874 1581 ntBASIC5.79□□□□□ -1.48
SHMT2P34897 XKRY-202ENST00000624960 1581 ntBASIC5.79□□□□□ -1.48
SHMT2P34897 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.79□□□□□ -1.48
SHMT2P34897 AC232271.1-201ENST00000602455 2715 ntBASIC5.79□□□□□ -1.48
SHMT2P34897 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.79□□□□□ -1.48
SHMT2P34897 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.79□□□□□ -1.48
SHMT2P34897 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.78□□□□□ -1.48
SHMT2P34897 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
SHMT2P34897 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
SHMT2P34897 RNF6-202ENST00000381570 3398 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHMT2P34897 APBB2-230ENST00000543538 6992 ntTSL 5 BASIC5.78□□□□□ -1.48
SHMT2P34897 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHMT2P34897 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
SHMT2P34897 NLRP3P1-201ENST00000622303 1785 ntBASIC5.78□□□□□ -1.48
SHMT2P34897 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.78□□□□□ -1.48
SHMT2P34897 AC027088.4-201ENST00000611559 1947 ntBASIC5.78□□□□□ -1.48
SHMT2P34897 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
SHMT2P34897 AC023490.2-201ENST00000359859 470 ntBASIC5.78□□□□□ -1.48
SHMT2P34897 RNA5SP211-201ENST00000365516 117 ntBASIC5.78□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms