Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 PLEKHS1-203ENST00000369309 2534 ntTSL 5 BASIC8.36□□□□□ -1.07
RXRBP28702 PHYHIPL-202ENST00000373880 3578 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RXRBP28702 TMEM192-201ENST00000306480 10012 ntAPPRIS P1 TSL 1 (best) BASIC8.36□□□□□ -1.07
RXRBP28702 YME1L1-201ENST00000326799 3994 ntTSL 1 (best) BASIC8.36□□□□□ -1.07
RXRBP28702 AL359976.1-201ENST00000418655 3528 ntBASIC8.36□□□□□ -1.07
RXRBP28702 AC092725.2-201ENST00000567658 1389 ntBASIC8.35□□□□□ -1.07
RXRBP28702 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
RXRBP28702 AC009948.3-201ENST00000603415 1798 ntBASIC8.35□□□□□ -1.07
RXRBP28702 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RXRBP28702 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC8.35□□□□□ -1.07
RXRBP28702 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC8.35□□□□□ -1.07
RXRBP28702 BTN3A2-205ENST00000508906 3733 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
RXRBP28702 THOC1-201ENST00000261600 2087 ntAPPRIS P2 TSL 1 (best) BASIC8.35□□□□□ -1.07
RXRBP28702 ZNF29P-201ENST00000225587 168 ntBASIC8.35□□□□□ -1.07
RXRBP28702 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC8.35□□□□□ -1.07
RXRBP28702 C1orf162-202ENST00000369718 915 ntAPPRIS ALT2 TSL 2 BASIC8.35□□□□□ -1.07
RXRBP28702 Y_RNA.599-201ENST00000410489 109 ntBASIC8.35□□□□□ -1.07
RXRBP28702 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC8.35□□□□□ -1.07
RXRBP28702 RPL23AP85-201ENST00000421838 433 ntBASIC8.35□□□□□ -1.07
RXRBP28702 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC8.35□□□□□ -1.07
RXRBP28702 PRELID3BP10-201ENST00000431957 584 ntBASIC8.35□□□□□ -1.07
RXRBP28702 OR3D1P-201ENST00000438288 955 ntBASIC8.35□□□□□ -1.07
RXRBP28702 MTND4P25-201ENST00000441039 533 ntBASIC8.35□□□□□ -1.07
RXRBP28702 AL136528.1-201ENST00000443034 754 ntTSL 3 BASIC8.35□□□□□ -1.07
RXRBP28702 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC8.35□□□□□ -1.07
RXRBP28702 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC8.35□□□□□ -1.07
RXRBP28702 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC8.35□□□□□ -1.07
RXRBP28702 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC8.35□□□□□ -1.07
RXRBP28702 AC138866.2-201ENST00000508650 584 ntBASIC8.35□□□□□ -1.07
RXRBP28702 AC109481.1-201ENST00000509173 282 ntBASIC8.35□□□□□ -1.07
RXRBP28702 AF213884.2-201ENST00000510417 903 ntBASIC8.35□□□□□ -1.07
RXRBP28702 AC147055.3-201ENST00000510547 851 ntBASIC8.35□□□□□ -1.07
RXRBP28702 AC021451.1-201ENST00000523498 1129 ntBASIC8.35□□□□□ -1.07
RXRBP28702 AC134775.1-201ENST00000531268 464 ntTSL 2 BASIC8.35□□□□□ -1.07
RXRBP28702 OR5D15P-201ENST00000531671 942 ntBASIC8.35□□□□□ -1.07
RXRBP28702 AC004825.1-201ENST00000555068 586 ntBASIC8.35□□□□□ -1.07
RXRBP28702 RN7SL708P-201ENST00000580952 299 ntBASIC8.35□□□□□ -1.07
RXRBP28702 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
RXRBP28702 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC8.35□□□□□ -1.07
RXRBP28702 FKBP1AP1-201ENST00000594588 318 ntBASIC8.35□□□□□ -1.07
RXRBP28702 RPL12P48-201ENST00000605620 304 ntBASIC8.35□□□□□ -1.07
RXRBP28702 AL392048.1-201ENST00000613946 534 ntBASIC8.35□□□□□ -1.07
RXRBP28702 AP000577.1-201ENST00000624366 878 ntBASIC8.35□□□□□ -1.07
RXRBP28702 OR8D2-201ENST00000624618 1051 ntAPPRIS P1 BASIC8.35□□□□□ -1.07
RXRBP28702 OXSM-209ENST00000626005 309 ntTSL 3 BASIC8.35□□□□□ -1.07
RXRBP28702 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC8.35□□□□□ -1.07
RXRBP28702 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC8.35□□□□□ -1.07
RXRBP28702 AL161901.1-201ENST00000624954 3425 ntBASIC8.35□□□□□ -1.07
RXRBP28702 IMPG1-201ENST00000369950 3558 ntAPPRIS P3 TSL 1 (best) BASIC8.35□□□□□ -1.07
RXRBP28702 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RXRBP28702 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC8.35□□□□□ -1.07
RXRBP28702 CREM-208ENST00000361599 2170 ntTSL 5 BASIC8.35□□□□□ -1.07
RXRBP28702 THSD7B-202ENST00000409968 6111 ntAPPRIS P2 TSL 5 BASIC8.35□□□□□ -1.07
RXRBP28702 ZC3H11B-202ENST00000636126 4432 ntAPPRIS ALT1 TSL 2 BASIC8.35□□□□□ -1.07
RXRBP28702 Z98755.1-201ENST00000407015 1384 ntBASIC8.35□□□□□ -1.07
RXRBP28702 CD163-201ENST00000359156 4268 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
RXRBP28702 AF131215.2-201ENST00000531549 1710 ntBASIC8.34□□□□□ -1.07
RXRBP28702 PPFIA2-201ENST00000333447 5517 ntTSL 5 BASIC8.34□□□□□ -1.07
RXRBP28702 LINC01788-201ENST00000419450 2086 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RXRBP28702 ZFY-202ENST00000383052 5113 ntAPPRIS P1 TSL 5 BASIC8.34□□□□□ -1.07
RXRBP28702 OLFML1-201ENST00000329293 2792 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
RXRBP28702 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC8.34□□□□□ -1.07
RXRBP28702 ADAM7-204ENST00000520720 1870 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RXRBP28702 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
RXRBP28702 LRRC37A-201ENST00000320254 5177 ntAPPRIS P2 TSL 1 (best) BASIC8.34□□□□□ -1.07
RXRBP28702 MAPK10-347ENST00000641762 2856 ntBASIC8.34□□□□□ -1.07
RXRBP28702 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
RXRBP28702 CACNA1D-201ENST00000288139 9341 ntAPPRIS P3 TSL 1 (best) BASIC8.34□□□□□ -1.07
RXRBP28702 OR52N4-201ENST00000317254 1037 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
RXRBP28702 RNU6-648P-201ENST00000410190 107 ntBASIC8.34□□□□□ -1.07
RXRBP28702 BMS1P17-202ENST00000416720 316 ntBASIC8.34□□□□□ -1.07
RXRBP28702 TRGV5P-201ENST00000419915 354 ntBASIC8.34□□□□□ -1.07
RXRBP28702 AC234781.2-201ENST00000426370 994 ntBASIC8.34□□□□□ -1.07
RXRBP28702 RPS7P14-201ENST00000426405 583 ntBASIC8.34□□□□□ -1.07
RXRBP28702 AL139148.1-201ENST00000427122 680 ntBASIC8.34□□□□□ -1.07
RXRBP28702 MTCO1P51-201ENST00000427672 1060 ntBASIC8.34□□□□□ -1.07
RXRBP28702 GAPDHP75-201ENST00000433910 943 ntBASIC8.34□□□□□ -1.07
RXRBP28702 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC8.34□□□□□ -1.07
RXRBP28702 AC093581.1-201ENST00000446411 461 ntTSL 2 BASIC8.34□□□□□ -1.07
RXRBP28702 HIGD1AP8-201ENST00000453927 274 ntBASIC8.34□□□□□ -1.07
RXRBP28702 MTCO3P16-201ENST00000454456 754 ntBASIC8.34□□□□□ -1.07
RXRBP28702 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC8.34□□□□□ -1.07
RXRBP28702 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC8.34□□□□□ -1.07
RXRBP28702 HIGD1AP14-201ENST00000507617 282 ntBASIC8.34□□□□□ -1.07
RXRBP28702 CTHRC1-204ENST00000520880 560 ntTSL 4 BASIC8.34□□□□□ -1.07
RXRBP28702 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC8.34□□□□□ -1.07
RXRBP28702 PCNAP4-201ENST00000532690 730 ntBASIC8.34□□□□□ -1.07
RXRBP28702 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC8.34□□□□□ -1.07
RXRBP28702 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC8.34□□□□□ -1.07
RXRBP28702 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC8.34□□□□□ -1.07
RXRBP28702 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC8.34□□□□□ -1.07
RXRBP28702 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC8.34□□□□□ -1.07
RXRBP28702 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
RXRBP28702 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC8.34□□□□□ -1.07
RXRBP28702 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC8.34□□□□□ -1.07
RXRBP28702 AP001153.1-201ENST00000641024 338 ntBASIC8.34□□□□□ -1.07
RXRBP28702 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
RXRBP28702 HRH1-203ENST00000431010 4278 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
RXRBP28702 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
RXRBP28702 AL023806.3-201ENST00000638502 2704 ntBASIC8.34□□□□□ -1.07
Retrieved 100 of 98,524 protein–RNA pairs in 123 ms