Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.87□□□□□ -1.31
POLR2AP24928 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC6.87□□□□□ -1.31
POLR2AP24928 AC097478.2-201ENST00000610572 514 ntBASIC6.87□□□□□ -1.31
POLR2AP24928 AL354950.1-201ENST00000614150 568 ntBASIC6.87□□□□□ -1.31
POLR2AP24928 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC6.87□□□□□ -1.31
POLR2AP24928 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.87□□□□□ -1.31
POLR2AP24928 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC6.87□□□□□ -1.31
POLR2AP24928 FAM135B-204ENST00000395297 6962 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
POLR2AP24928 NUFIP1-201ENST00000379161 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
POLR2AP24928 IMMTP1-201ENST00000435590 2219 ntBASIC6.87□□□□□ -1.31
POLR2AP24928 LINC02401-201ENST00000550185 3059 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
POLR2AP24928 VWA3A-202ENST00000389398 4600 ntAPPRIS P2 TSL 5 BASIC6.86□□□□□ -1.31
POLR2AP24928 PSEN1-201ENST00000324501 6078 ntAPPRIS P4 TSL 1 (best) BASIC6.86□□□□□ -1.31
POLR2AP24928 AC093829.1-201ENST00000506662 1618 ntBASIC6.86□□□□□ -1.31
POLR2AP24928 ZNF207-207ENST00000577908 4672 ntAPPRIS ALT1 TSL 5 BASIC6.86□□□□□ -1.31
POLR2AP24928 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.86□□□□□ -1.31
POLR2AP24928 RPL7L1P9-201ENST00000431298 745 ntBASIC6.86□□□□□ -1.31
POLR2AP24928 VN1R54P-201ENST00000435210 1049 ntBASIC6.86□□□□□ -1.31
POLR2AP24928 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC6.86□□□□□ -1.31
POLR2AP24928 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.86□□□□□ -1.31
POLR2AP24928 AL500527.1-201ENST00000448532 255 ntBASIC6.86□□□□□ -1.31
POLR2AP24928 LINC02505-203ENST00000515128 756 ntTSL 5 BASIC6.86□□□□□ -1.31
POLR2AP24928 NRBF2P4-201ENST00000520874 850 ntBASIC6.86□□□□□ -1.31
POLR2AP24928 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC6.86□□□□□ -1.31
POLR2AP24928 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
POLR2AP24928 MIR4311-201ENST00000580794 100 ntBASIC6.86□□□□□ -1.31
POLR2AP24928 MIR4480-201ENST00000582492 71 ntBASIC6.86□□□□□ -1.31
POLR2AP24928 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC6.86□□□□□ -1.31
POLR2AP24928 PPATP2-201ENST00000605635 508 ntBASIC6.86□□□□□ -1.31
POLR2AP24928 AC084782.3-201ENST00000612282 578 ntBASIC6.86□□□□□ -1.31
POLR2AP24928 DNAJC10-209ENST00000613960 1010 ntTSL 5 BASIC6.86□□□□□ -1.31
POLR2AP24928 AC132068.1-201ENST00000623805 459 ntBASIC6.86□□□□□ -1.31
POLR2AP24928 SETDB1-201ENST00000271640 4437 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
POLR2AP24928 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
POLR2AP24928 AC137056.2-201ENST00000624055 1958 ntBASIC6.86□□□□□ -1.31
POLR2AP24928 OFD1P17-201ENST00000437639 3018 ntBASIC6.86□□□□□ -1.31
POLR2AP24928 RPGRIP1L-202ENST00000379925 5297 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
POLR2AP24928 LINC01128-205ENST00000445118 6606 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
POLR2AP24928 AC009166.2-201ENST00000624410 2833 ntBASIC6.86□□□□□ -1.31
POLR2AP24928 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.86□□□□□ -1.31
POLR2AP24928 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
POLR2AP24928 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
POLR2AP24928 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
POLR2AP24928 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
POLR2AP24928 SIAH3-201ENST00000400405 7057 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
POLR2AP24928 MGAM-209ENST00000620571 6483 ntTSL 5 BASIC6.86□□□□□ -1.31
POLR2AP24928 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
POLR2AP24928 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
POLR2AP24928 AL139805.2-201ENST00000455305 2433 ntBASIC6.86□□□□□ -1.31
POLR2AP24928 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
POLR2AP24928 OR10R3P-201ENST00000361688 942 ntBASIC6.86□□□□□ -1.31
POLR2AP24928 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.86□□□□□ -1.31
POLR2AP24928 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.86□□□□□ -1.31
POLR2AP24928 ITGA9-AS1-202ENST00000420870 581 ntTSL 4 BASIC6.86□□□□□ -1.31
POLR2AP24928 AL356806.1-201ENST00000422524 916 ntBASIC6.86□□□□□ -1.31
POLR2AP24928 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC6.86□□□□□ -1.31
POLR2AP24928 ITGA9-AS1-203ENST00000429532 702 ntTSL 5 BASIC6.86□□□□□ -1.31
POLR2AP24928 RBMY2QP-201ENST00000429799 1147 ntBASIC6.86□□□□□ -1.31
POLR2AP24928 AC005297.1-201ENST00000444765 862 ntBASIC6.86□□□□□ -1.31
POLR2AP24928 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
POLR2AP24928 MTND2P3-201ENST00000452458 470 ntBASIC6.86□□□□□ -1.31
POLR2AP24928 AC112187.1-201ENST00000455837 479 ntBASIC6.86□□□□□ -1.31
POLR2AP24928 AC108161.1-201ENST00000461060 402 ntBASIC6.86□□□□□ -1.31
POLR2AP24928 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
POLR2AP24928 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
POLR2AP24928 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC6.86□□□□□ -1.31
POLR2AP24928 AC090109.1-201ENST00000548885 819 ntTSL 3 BASIC6.86□□□□□ -1.31
POLR2AP24928 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.86□□□□□ -1.31
POLR2AP24928 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC6.86□□□□□ -1.31
POLR2AP24928 AC026464.3-201ENST00000563634 564 ntAPPRIS P1 TSL 4 BASIC6.86□□□□□ -1.31
POLR2AP24928 SETP3-201ENST00000581726 813 ntBASIC6.86□□□□□ -1.31
POLR2AP24928 AC021517.1-203ENST00000590257 421 ntTSL 3 BASIC6.86□□□□□ -1.31
POLR2AP24928 AC000068.2-201ENST00000608816 460 ntBASIC6.86□□□□□ -1.31
POLR2AP24928 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC6.86□□□□□ -1.31
POLR2AP24928 MIR6837-201ENST00000620884 64 ntBASIC6.86□□□□□ -1.31
POLR2AP24928 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.86□□□□□ -1.31
POLR2AP24928 AC073342.3-201ENST00000624211 193 ntBASIC6.86□□□□□ -1.31
POLR2AP24928 LINC01739-205ENST00000641890 573 ntBASIC6.86□□□□□ -1.31
POLR2AP24928 PRKCA-202ENST00000413366 8751 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
POLR2AP24928 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
POLR2AP24928 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
POLR2AP24928 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
POLR2AP24928 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
POLR2AP24928 AC023421.1-201ENST00000590535 1785 ntBASIC6.85□□□□□ -1.31
POLR2AP24928 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.85□□□□□ -1.31
POLR2AP24928 TRPS1-203ENST00000395715 9990 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
POLR2AP24928 BEST1-202ENST00000449131 4267 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
POLR2AP24928 CTAGE11P-201ENST00000451540 2353 ntBASIC6.85□□□□□ -1.31
POLR2AP24928 ROBO1-202ENST00000464233 6742 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
POLR2AP24928 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
POLR2AP24928 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
POLR2AP24928 CTNND1-203ENST00000361391 6232 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
POLR2AP24928 ITPR1-205ENST00000456211 9717 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
POLR2AP24928 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC6.85□□□□□ -1.31
POLR2AP24928 RN7SKP28-201ENST00000364770 305 ntBASIC6.85□□□□□ -1.31
POLR2AP24928 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
POLR2AP24928 AL133270.1-201ENST00000402635 279 ntBASIC6.85□□□□□ -1.31
POLR2AP24928 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.85□□□□□ -1.31
POLR2AP24928 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC6.85□□□□□ -1.31
POLR2AP24928 RPA2P2-201ENST00000419698 796 ntBASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 74.3 ms