Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 SUMO2P3-201ENST00000438311 288 ntBASIC6.16□□□□□ -1.42
RETP07949 PPIAP10-201ENST00000438675 458 ntBASIC6.16□□□□□ -1.42
RETP07949 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.16□□□□□ -1.42
RETP07949 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC6.16□□□□□ -1.42
RETP07949 AL122020.1-201ENST00000472287 459 ntBASIC6.16□□□□□ -1.42
RETP07949 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC6.16□□□□□ -1.42
RETP07949 AC013644.1-201ENST00000523724 555 ntTSL 4 BASIC6.16□□□□□ -1.42
RETP07949 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.16□□□□□ -1.42
RETP07949 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC6.16□□□□□ -1.42
RETP07949 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RETP07949 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC6.16□□□□□ -1.42
RETP07949 MIR6809-201ENST00000612189 116 ntBASIC6.16□□□□□ -1.42
RETP07949 AC037198.3-201ENST00000616754 526 ntBASIC6.16□□□□□ -1.42
RETP07949 AL133243.2-201ENST00000610331 1621 ntBASIC6.16□□□□□ -1.42
RETP07949 SOAT1-201ENST00000367619 6835 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RETP07949 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RETP07949 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.16□□□□□ -1.42
RETP07949 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
RETP07949 AC007342.5-201ENST00000571340 2142 ntBASIC6.16□□□□□ -1.42
RETP07949 TPTE2P2-202ENST00000605924 2113 ntTSL 5 BASIC6.16□□□□□ -1.42
RETP07949 KCNMA1-AS1-202ENST00000429850 3566 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RETP07949 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
RETP07949 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RETP07949 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.15□□□□□ -1.42
RETP07949 SOS1-201ENST00000395038 4123 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
RETP07949 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RETP07949 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
RETP07949 AL157831.2-201ENST00000564681 3095 ntBASIC6.15□□□□□ -1.42
RETP07949 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RETP07949 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.15□□□□□ -1.42
RETP07949 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.15□□□□□ -1.42
RETP07949 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RETP07949 GTSF1-209ENST00000552397 1621 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
RETP07949 AL353763.1-201ENST00000624467 1628 ntBASIC6.15□□□□□ -1.42
RETP07949 ZNF329-201ENST00000358067 3290 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
RETP07949 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC6.15□□□□□ -1.42
RETP07949 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RETP07949 RN7SKP162-201ENST00000363605 345 ntBASIC6.15□□□□□ -1.42
RETP07949 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
RETP07949 SNORA70-201ENST00000384436 135 ntBASIC6.15□□□□□ -1.42
RETP07949 OR7E101P-201ENST00000400428 513 ntBASIC6.15□□□□□ -1.42
RETP07949 AC136624.1-201ENST00000400791 413 ntBASIC6.15□□□□□ -1.42
RETP07949 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
RETP07949 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC6.15□□□□□ -1.42
RETP07949 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.15□□□□□ -1.42
RETP07949 BX323845.3-201ENST00000428215 527 ntBASIC6.15□□□□□ -1.42
RETP07949 FTLP8-201ENST00000446770 267 ntBASIC6.15□□□□□ -1.42
RETP07949 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC6.15□□□□□ -1.42
RETP07949 OR5M14P-201ENST00000506803 618 ntBASIC6.15□□□□□ -1.42
RETP07949 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.15□□□□□ -1.42
RETP07949 AC010343.2-201ENST00000510162 224 ntBASIC6.15□□□□□ -1.42
RETP07949 AC026782.2-201ENST00000510845 636 ntBASIC6.15□□□□□ -1.42
RETP07949 RN7SKP67-201ENST00000515905 235 ntBASIC6.15□□□□□ -1.42
RETP07949 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC6.15□□□□□ -1.42
RETP07949 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
RETP07949 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.15□□□□□ -1.42
RETP07949 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC6.15□□□□□ -1.42
RETP07949 AC016839.1-201ENST00000578162 867 ntBASIC6.15□□□□□ -1.42
RETP07949 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC6.15□□□□□ -1.42
RETP07949 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC6.15□□□□□ -1.42
RETP07949 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
RETP07949 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.43
RETP07949 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
RETP07949 AC117409.1-201ENST00000470499 1310 ntBASIC6.15□□□□□ -1.43
RETP07949 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RETP07949 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
RETP07949 LARP7-210ENST00000509061 2332 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
RETP07949 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
RETP07949 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
RETP07949 DTNA-206ENST00000399121 6490 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
RETP07949 HHLA1-201ENST00000414222 4105 ntAPPRIS ALT2 TSL 5 BASIC6.14□□□□□ -1.43
RETP07949 AC063923.1-201ENST00000478982 1619 ntBASIC6.14□□□□□ -1.43
RETP07949 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
RETP07949 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.14□□□□□ -1.43
RETP07949 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
RETP07949 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.14□□□□□ -1.43
RETP07949 RAD54B-201ENST00000297592 1879 ntTSL 2 BASIC6.14□□□□□ -1.43
RETP07949 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
RETP07949 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
RETP07949 ZSCAN12P1-201ENST00000406489 419 ntBASIC6.14□□□□□ -1.43
RETP07949 RN7SKP216-201ENST00000411050 312 ntBASIC6.14□□□□□ -1.43
RETP07949 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.14□□□□□ -1.43
RETP07949 AC107079.1-201ENST00000416509 669 ntTSL 2 BASIC6.14□□□□□ -1.43
RETP07949 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
RETP07949 AC117944.1-201ENST00000430748 641 ntTSL 3 BASIC6.14□□□□□ -1.43
RETP07949 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RETP07949 AC114728.1-201ENST00000488289 483 ntBASIC6.14□□□□□ -1.43
RETP07949 AC091965.3-201ENST00000506236 208 ntBASIC6.14□□□□□ -1.43
RETP07949 AL133372.2-203ENST00000508469 922 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
RETP07949 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC6.14□□□□□ -1.43
RETP07949 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.14□□□□□ -1.43
RETP07949 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC6.14□□□□□ -1.43
RETP07949 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC6.14□□□□□ -1.43
RETP07949 AC021269.1-201ENST00000526860 705 ntBASIC6.14□□□□□ -1.43
RETP07949 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC6.14□□□□□ -1.43
RETP07949 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC6.14□□□□□ -1.43
RETP07949 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.14□□□□□ -1.43
RETP07949 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.14□□□□□ -1.43
RETP07949 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC6.14□□□□□ -1.43
RETP07949 AC103876.1-202ENST00000561498 369 ntTSL 3 BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 126 ms