Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC7.52□□□□□ -1.21
COL5A2P05997 DSCAM-203ENST00000617870 6176 ntTSL 5 BASIC7.52□□□□□ -1.21
COL5A2P05997 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC7.52□□□□□ -1.21
COL5A2P05997 TRAPPC2-203ENST00000380579 2776 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
COL5A2P05997 AL353763.1-201ENST00000624467 1628 ntBASIC7.52□□□□□ -1.21
COL5A2P05997 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC7.52□□□□□ -1.21
COL5A2P05997 AL133325.1-201ENST00000421090 382 ntBASIC7.52□□□□□ -1.21
COL5A2P05997 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
COL5A2P05997 LDHAP2-201ENST00000437325 985 ntBASIC7.52□□□□□ -1.21
COL5A2P05997 ELOCP3-201ENST00000439303 348 ntBASIC7.52□□□□□ -1.21
COL5A2P05997 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC7.52□□□□□ -1.21
COL5A2P05997 MIR2117-201ENST00000516780 80 ntBASIC7.52□□□□□ -1.21
COL5A2P05997 RNU6ATAC24P-201ENST00000516811 135 ntBASIC7.52□□□□□ -1.21
COL5A2P05997 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC7.52□□□□□ -1.21
COL5A2P05997 AC108449.2-201ENST00000560865 552 ntTSL 3 BASIC7.52□□□□□ -1.21
COL5A2P05997 MIR4646-201ENST00000580775 63 ntBASIC7.52□□□□□ -1.21
COL5A2P05997 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
COL5A2P05997 OR51E2-203ENST00000641638 2626 ntAPPRIS P1 BASIC7.52□□□□□ -1.21
COL5A2P05997 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC7.52□□□□□ -1.21
COL5A2P05997 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC7.52□□□□□ -1.21
COL5A2P05997 CACNA1C-220ENST00000399655 13433 ntAPPRIS ALT2 TSL 1 (best) BASIC7.52□□□□□ -1.21
COL5A2P05997 MAGEB16-204ENST00000399989 1818 ntAPPRIS P2 TSL 5 BASIC7.52□□□□□ -1.21
COL5A2P05997 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
COL5A2P05997 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC7.52□□□□□ -1.21
COL5A2P05997 PHLDB2-201ENST00000393923 5673 ntTSL 2 BASIC7.52□□□□□ -1.21
COL5A2P05997 ITPR1-202ENST00000354582 10242 ntTSL 5 BASIC7.52□□□□□ -1.21
COL5A2P05997 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
COL5A2P05997 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC7.52□□□□□ -1.21
COL5A2P05997 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
COL5A2P05997 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC7.52□□□□□ -1.21
COL5A2P05997 SYTL5-201ENST00000297875 4722 ntTSL 5 BASIC7.52□□□□□ -1.21
COL5A2P05997 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
COL5A2P05997 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
COL5A2P05997 SYNPO2-202ENST00000429713 9920 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
COL5A2P05997 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL5A2P05997 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC7.51□□□□□ -1.21
COL5A2P05997 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
COL5A2P05997 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
COL5A2P05997 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL5A2P05997 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
COL5A2P05997 RN7SKP151-201ENST00000410230 316 ntBASIC7.51□□□□□ -1.21
COL5A2P05997 RN7SKP279-201ENST00000411383 298 ntBASIC7.51□□□□□ -1.21
COL5A2P05997 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC7.51□□□□□ -1.21
COL5A2P05997 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC7.51□□□□□ -1.21
COL5A2P05997 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC7.51□□□□□ -1.21
COL5A2P05997 AL731534.1-201ENST00000434711 269 ntBASIC7.51□□□□□ -1.21
COL5A2P05997 AC011742.2-201ENST00000443818 352 ntBASIC7.51□□□□□ -1.21
COL5A2P05997 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC7.51□□□□□ -1.21
COL5A2P05997 AC073850.1-201ENST00000449243 255 ntBASIC7.51□□□□□ -1.21
COL5A2P05997 AL389915.2-201ENST00000454576 441 ntBASIC7.51□□□□□ -1.21
COL5A2P05997 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC7.51□□□□□ -1.21
COL5A2P05997 RN7SL447P-201ENST00000494711 245 ntBASIC7.51□□□□□ -1.21
COL5A2P05997 AC013644.1-202ENST00000523166 499 ntTSL 2 BASIC7.51□□□□□ -1.21
COL5A2P05997 AC090424.1-201ENST00000535243 736 ntBASIC7.51□□□□□ -1.21
COL5A2P05997 HNRNPCP1-201ENST00000556181 766 ntBASIC7.51□□□□□ -1.21
COL5A2P05997 AC010551.2-201ENST00000569200 416 ntTSL 3 BASIC7.51□□□□□ -1.21
COL5A2P05997 RBM22P1-201ENST00000578589 1214 ntBASIC7.51□□□□□ -1.21
COL5A2P05997 AC024267.4-201ENST00000580782 683 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
COL5A2P05997 LINC01739-205ENST00000641890 573 ntBASIC7.51□□□□□ -1.21
COL5A2P05997 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
COL5A2P05997 ZNF121-202ENST00000586602 7177 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
COL5A2P05997 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
COL5A2P05997 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
COL5A2P05997 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL5A2P05997 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
COL5A2P05997 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
COL5A2P05997 GART-205ENST00000381839 3469 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL5A2P05997 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
COL5A2P05997 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
COL5A2P05997 UG0898H09-202ENST00000623646 7040 ntBASIC7.51□□□□□ -1.21
COL5A2P05997 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
COL5A2P05997 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
COL5A2P05997 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
COL5A2P05997 EMX2OS-206ENST00000551288 7280 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
COL5A2P05997 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
COL5A2P05997 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC7.5□□□□□ -1.21
COL5A2P05997 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
COL5A2P05997 AL121768.1-201ENST00000613917 2544 ntBASIC7.5□□□□□ -1.21
COL5A2P05997 FABP7-202ENST00000368444 1026 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
COL5A2P05997 FABP12P1-201ENST00000401911 322 ntBASIC7.5□□□□□ -1.21
COL5A2P05997 AL807761.1-201ENST00000417622 171 ntBASIC7.5□□□□□ -1.21
COL5A2P05997 AC007562.1-201ENST00000421819 517 ntBASIC7.5□□□□□ -1.21
COL5A2P05997 CEACAMP7-201ENST00000444105 496 ntBASIC7.5□□□□□ -1.21
COL5A2P05997 AC023274.2-201ENST00000445264 521 ntBASIC7.5□□□□□ -1.21
COL5A2P05997 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
COL5A2P05997 RPL7L1P3-201ENST00000455249 689 ntBASIC7.5□□□□□ -1.21
COL5A2P05997 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
COL5A2P05997 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC7.5□□□□□ -1.21
COL5A2P05997 MAL2-207ENST00000522828 603 ntTSL 3 BASIC7.5□□□□□ -1.21
COL5A2P05997 AC018558.3-201ENST00000567902 572 ntTSL 4 BASIC7.5□□□□□ -1.21
COL5A2P05997 CASC22-201ENST00000569713 386 ntTSL 5 BASIC7.5□□□□□ -1.21
COL5A2P05997 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC7.5□□□□□ -1.21
COL5A2P05997 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC7.5□□□□□ -1.21
COL5A2P05997 GJC1-207ENST00000590758 7566 ntAPPRIS P1 TSL 3 BASIC7.5□□□□□ -1.21
COL5A2P05997 CAST-222ENST00000508579 1758 ntTSL 2 BASIC7.5□□□□□ -1.21
COL5A2P05997 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
COL5A2P05997 RAB14-201ENST00000373840 4145 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
COL5A2P05997 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC7.5□□□□□ -1.21
COL5A2P05997 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
COL5A2P05997 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 136.3 ms