Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC099521.1-201ENST00000482557 334 ntBASIC6.46□□□□□ -1.38
CHRNA1P02708 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC6.46□□□□□ -1.38
CHRNA1P02708 AC109481.1-201ENST00000509173 282 ntBASIC6.46□□□□□ -1.38
CHRNA1P02708 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.46□□□□□ -1.38
CHRNA1P02708 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.46□□□□□ -1.38
CHRNA1P02708 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC6.46□□□□□ -1.38
CHRNA1P02708 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.46□□□□□ -1.38
CHRNA1P02708 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.46□□□□□ -1.38
CHRNA1P02708 AC027026.1-201ENST00000532323 742 ntBASIC6.46□□□□□ -1.38
CHRNA1P02708 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.46□□□□□ -1.38
CHRNA1P02708 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.46□□□□□ -1.38
CHRNA1P02708 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.46□□□□□ -1.38
CHRNA1P02708 AC007494.1-201ENST00000562293 760 ntBASIC6.46□□□□□ -1.38
CHRNA1P02708 AC016180.1-201ENST00000567945 403 ntBASIC6.46□□□□□ -1.38
CHRNA1P02708 TXNP4-201ENST00000575018 310 ntBASIC6.46□□□□□ -1.38
CHRNA1P02708 OR7E18P-201ENST00000592589 702 ntBASIC6.46□□□□□ -1.38
CHRNA1P02708 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC6.46□□□□□ -1.38
CHRNA1P02708 AL583832.1-201ENST00000603227 784 ntBASIC6.46□□□□□ -1.38
CHRNA1P02708 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC6.46□□□□□ -1.38
CHRNA1P02708 AL139099.4-201ENST00000614802 114 ntBASIC6.46□□□□□ -1.38
CHRNA1P02708 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC6.46□□□□□ -1.38
CHRNA1P02708 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC6.46□□□□□ -1.38
CHRNA1P02708 CU639417.4-201ENST00000623928 207 ntBASIC6.46□□□□□ -1.38
CHRNA1P02708 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
CHRNA1P02708 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.46□□□□□ -1.38
CHRNA1P02708 OLMALINC-203ENST00000641087 3779 ntBASIC6.46□□□□□ -1.38
CHRNA1P02708 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
CHRNA1P02708 SNX18P3-202ENST00000565670 1750 ntBASIC6.46□□□□□ -1.38
CHRNA1P02708 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC6.46□□□□□ -1.38
CHRNA1P02708 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
CHRNA1P02708 MCFD2-206ENST00000409800 3955 ntTSL 4 BASIC6.46□□□□□ -1.38
CHRNA1P02708 NBPF11-204ENST00000614785 4343 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
CHRNA1P02708 TNKS-206ENST00000518281 3897 ntTSL 2 BASIC6.46□□□□□ -1.38
CHRNA1P02708 AC119674.1-213ENST00000641177 1386 ntBASIC6.45□□□□□ -1.38
CHRNA1P02708 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CHRNA1P02708 AC034229.2-201ENST00000566945 2508 ntBASIC6.45□□□□□ -1.38
CHRNA1P02708 LINC00939-201ENST00000502479 4972 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CHRNA1P02708 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CHRNA1P02708 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
CHRNA1P02708 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CHRNA1P02708 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CHRNA1P02708 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CHRNA1P02708 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
CHRNA1P02708 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CHRNA1P02708 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
CHRNA1P02708 AC067956.1-201ENST00000414512 2062 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CHRNA1P02708 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.45□□□□□ -1.38
CHRNA1P02708 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
CHRNA1P02708 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
CHRNA1P02708 AL451142.1-201ENST00000375867 775 ntBASIC6.45□□□□□ -1.38
CHRNA1P02708 OR2AT2P-201ENST00000413438 905 ntBASIC6.45□□□□□ -1.38
CHRNA1P02708 AC016769.2-201ENST00000414815 475 ntBASIC6.45□□□□□ -1.38
CHRNA1P02708 SETP9-201ENST00000423837 832 ntBASIC6.45□□□□□ -1.38
CHRNA1P02708 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.45□□□□□ -1.38
CHRNA1P02708 RN7SL165P-201ENST00000477476 291 ntBASIC6.45□□□□□ -1.38
CHRNA1P02708 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.45□□□□□ -1.38
CHRNA1P02708 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.45□□□□□ -1.38
CHRNA1P02708 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.45□□□□□ -1.38
CHRNA1P02708 OR4A40P-201ENST00000533878 948 ntBASIC6.45□□□□□ -1.38
CHRNA1P02708 AC007527.1-201ENST00000535528 313 ntTSL 2 BASIC6.45□□□□□ -1.38
CHRNA1P02708 GARSP1-201ENST00000570895 719 ntBASIC6.45□□□□□ -1.38
CHRNA1P02708 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC6.45□□□□□ -1.38
CHRNA1P02708 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.45□□□□□ -1.38
CHRNA1P02708 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.45□□□□□ -1.38
CHRNA1P02708 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.45□□□□□ -1.38
CHRNA1P02708 AC091193.1-201ENST00000604640 448 ntBASIC6.45□□□□□ -1.38
CHRNA1P02708 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.45□□□□□ -1.38
CHRNA1P02708 MIR6719-201ENST00000622428 87 ntBASIC6.45□□□□□ -1.38
CHRNA1P02708 AP000550.3-201ENST00000637734 379 ntBASIC6.45□□□□□ -1.38
CHRNA1P02708 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
CHRNA1P02708 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.45□□□□□ -1.38
CHRNA1P02708 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
CHRNA1P02708 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.45□□□□□ -1.38
CHRNA1P02708 CLEC4E-201ENST00000299663 2159 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CHRNA1P02708 MIR3681HG-201ENST00000412294 2183 ntTSL 2 BASIC6.45□□□□□ -1.38
CHRNA1P02708 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CHRNA1P02708 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
CHRNA1P02708 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CHRNA1P02708 MBNL2-202ENST00000345429 4669 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CHRNA1P02708 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.45□□□□□ -1.38
CHRNA1P02708 UQCC1-208ENST00000397554 3638 ntTSL 2 BASIC6.45□□□□□ -1.38
CHRNA1P02708 SBNO1-202ENST00000420886 10981 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CHRNA1P02708 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CHRNA1P02708 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.45□□□□□ -1.38
CHRNA1P02708 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CHRNA1P02708 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CHRNA1P02708 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CHRNA1P02708 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CHRNA1P02708 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
CHRNA1P02708 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
CHRNA1P02708 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
CHRNA1P02708 THRB-IT1-201ENST00000425296 1754 ntTSL 2 BASIC6.44□□□□□ -1.38
CHRNA1P02708 AC073365.1-203ENST00000641055 1992 ntBASIC6.44□□□□□ -1.38
CHRNA1P02708 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CHRNA1P02708 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CHRNA1P02708 ZNF292-201ENST00000339907 8287 ntAPPRIS ALT1 TSL 5 BASIC6.44□□□□□ -1.38
CHRNA1P02708 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CHRNA1P02708 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.44□□□□□ -1.38
CHRNA1P02708 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CHRNA1P02708 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 112.9 ms