Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PDGFBP01127 TTTY2-201ENST00000417072 3168 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PDGFBP01127 TTTY2B-201ENST00000450591 3168 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PDGFBP01127 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
PDGFBP01127 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
PDGFBP01127 AC016251.2-201ENST00000623393 3089 ntBASIC6.08□□□□□ -1.44
PDGFBP01127 MAP3K7CL-209ENST00000399947 2003 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PDGFBP01127 ZNF578-201ENST00000421239 2017 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
PDGFBP01127 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PDGFBP01127 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
PDGFBP01127 MROH3P-201ENST00000435735 2676 ntBASIC6.08□□□□□ -1.44
PDGFBP01127 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDGFBP01127 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
PDGFBP01127 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
PDGFBP01127 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDGFBP01127 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
PDGFBP01127 MIR1204-201ENST00000408388 67 ntBASIC6.08□□□□□ -1.44
PDGFBP01127 AL139415.1-201ENST00000424862 352 ntBASIC6.08□□□□□ -1.44
PDGFBP01127 LINC01013-203ENST00000443303 569 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PDGFBP01127 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.08□□□□□ -1.44
PDGFBP01127 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC6.08□□□□□ -1.44
PDGFBP01127 LINC01448-201ENST00000455947 1171 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PDGFBP01127 AC004692.2-203ENST00000458590 497 ntTSL 4 BASIC6.08□□□□□ -1.44
PDGFBP01127 LINC01214-201ENST00000471222 335 ntTSL 5 BASIC6.08□□□□□ -1.44
PDGFBP01127 RPL7AP6-201ENST00000477943 801 ntBASIC6.08□□□□□ -1.44
PDGFBP01127 RPSAP50-201ENST00000481955 852 ntBASIC6.08□□□□□ -1.44
PDGFBP01127 AC114728.1-201ENST00000488289 483 ntBASIC6.08□□□□□ -1.44
PDGFBP01127 OR2A3P-201ENST00000493774 953 ntBASIC6.08□□□□□ -1.44
PDGFBP01127 RPL15P21-201ENST00000495592 567 ntBASIC6.08□□□□□ -1.44
PDGFBP01127 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
PDGFBP01127 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC6.08□□□□□ -1.44
PDGFBP01127 AC110056.1-201ENST00000525759 911 ntBASIC6.08□□□□□ -1.44
PDGFBP01127 OR4A13P-201ENST00000529316 942 ntBASIC6.08□□□□□ -1.44
PDGFBP01127 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC6.08□□□□□ -1.44
PDGFBP01127 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC6.08□□□□□ -1.44
PDGFBP01127 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.08□□□□□ -1.44
PDGFBP01127 DPPA2P4-201ENST00000563717 878 ntBASIC6.08□□□□□ -1.44
PDGFBP01127 RNU4ATAC-201ENST00000580972 127 ntBASIC6.08□□□□□ -1.44
PDGFBP01127 MIR4436B2-201ENST00000581415 91 ntBASIC6.08□□□□□ -1.44
PDGFBP01127 MIR4436B1-201ENST00000583272 91 ntBASIC6.08□□□□□ -1.44
PDGFBP01127 AL953862.2-201ENST00000603089 820 ntBASIC6.08□□□□□ -1.44
PDGFBP01127 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC6.08□□□□□ -1.44
PDGFBP01127 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.08□□□□□ -1.44
PDGFBP01127 AC141002.1-201ENST00000607025 279 ntBASIC6.08□□□□□ -1.44
PDGFBP01127 AL137246.1-201ENST00000607072 977 ntBASIC6.08□□□□□ -1.44
PDGFBP01127 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC6.08□□□□□ -1.44
PDGFBP01127 AC100827.5-201ENST00000615883 426 ntBASIC6.08□□□□□ -1.44
PDGFBP01127 AC105105.5-201ENST00000622635 1294 ntBASIC6.08□□□□□ -1.44
PDGFBP01127 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
PDGFBP01127 ADCY10-205ENST00000545172 4966 ntTSL 2 BASIC6.08□□□□□ -1.44
PDGFBP01127 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
PDGFBP01127 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDGFBP01127 AL136531.3-201ENST00000624378 3658 ntBASIC6.08□□□□□ -1.44
PDGFBP01127 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PDGFBP01127 GSTCD-202ENST00000394728 2416 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
PDGFBP01127 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
PDGFBP01127 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDGFBP01127 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PDGFBP01127 NBPF12-205ENST00000617614 4630 ntTSL 5 BASIC6.08□□□□□ -1.44
PDGFBP01127 ZNF101P1-201ENST00000435701 1720 ntBASIC6.08□□□□□ -1.44
PDGFBP01127 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
PDGFBP01127 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.07□□□□□ -1.44
PDGFBP01127 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDGFBP01127 ZNF532-222ENST00000591083 5324 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDGFBP01127 FAM160A1-203ENST00000505231 4156 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
PDGFBP01127 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PDGFBP01127 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDGFBP01127 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC6.07□□□□□ -1.44
PDGFBP01127 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDGFBP01127 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PDGFBP01127 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.07□□□□□ -1.44
PDGFBP01127 TDP1-213ENST00000555880 1894 ntTSL 5 BASIC6.07□□□□□ -1.44
PDGFBP01127 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
PDGFBP01127 GCNT2-203ENST00000379597 4525 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDGFBP01127 OR2G6-202ENST00000641501 5840 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
PDGFBP01127 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.07□□□□□ -1.44
PDGFBP01127 OR6X1-201ENST00000327930 1058 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
PDGFBP01127 OR11H13P-201ENST00000359695 979 ntBASIC6.07□□□□□ -1.44
PDGFBP01127 AC016739.1-201ENST00000405359 345 ntBASIC6.07□□□□□ -1.44
PDGFBP01127 AL807761.1-201ENST00000417622 171 ntBASIC6.07□□□□□ -1.44
PDGFBP01127 AC244033.1-201ENST00000426826 870 ntBASIC6.07□□□□□ -1.44
PDGFBP01127 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.07□□□□□ -1.44
PDGFBP01127 BX119917.1-201ENST00000432517 502 ntBASIC6.07□□□□□ -1.44
PDGFBP01127 PSMD10P3-201ENST00000437000 448 ntBASIC6.07□□□□□ -1.44
PDGFBP01127 AC000111.1-201ENST00000441019 221 ntTSL 3 BASIC6.07□□□□□ -1.44
PDGFBP01127 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC6.07□□□□□ -1.44
PDGFBP01127 AC079841.1-201ENST00000481228 950 ntBASIC6.07□□□□□ -1.44
PDGFBP01127 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PDGFBP01127 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC6.07□□□□□ -1.44
PDGFBP01127 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC6.07□□□□□ -1.44
PDGFBP01127 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC6.07□□□□□ -1.44
PDGFBP01127 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.07□□□□□ -1.44
PDGFBP01127 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC6.07□□□□□ -1.44
PDGFBP01127 DARS-AS1-217ENST00000599279 544 ntTSL 5 BASIC6.07□□□□□ -1.44
PDGFBP01127 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC6.07□□□□□ -1.44
PDGFBP01127 AC104785.1-201ENST00000603220 588 ntBASIC6.07□□□□□ -1.44
PDGFBP01127 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
PDGFBP01127 AP001784.1-201ENST00000624107 428 ntBASIC6.07□□□□□ -1.44
PDGFBP01127 AC136428.4-201ENST00000634254 1155 ntBASIC6.07□□□□□ -1.44
PDGFBP01127 MEF2C-226ENST00000625674 4343 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms