Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC5.59□□□□□ -1.51
SSX4O60224 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC5.59□□□□□ -1.51
SSX4O60224 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
SSX4O60224 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.59□□□□□ -1.52
SSX4O60224 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC5.59□□□□□ -1.52
SSX4O60224 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC5.59□□□□□ -1.52
SSX4O60224 SGO1-202ENST00000306698 1531 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SSX4O60224 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSX4O60224 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SSX4O60224 BTK-209ENST00000618050 2417 ntTSL 5 BASIC5.58□□□□□ -1.52
SSX4O60224 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.58□□□□□ -1.52
SSX4O60224 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.58□□□□□ -1.52
SSX4O60224 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
SSX4O60224 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.58□□□□□ -1.52
SSX4O60224 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSX4O60224 DCDC1-203ENST00000406071 4758 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
SSX4O60224 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSX4O60224 OR2M4-201ENST00000306687 936 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
SSX4O60224 MRPS6P2-201ENST00000381143 370 ntBASIC5.58□□□□□ -1.52
SSX4O60224 RNA5SP122-201ENST00000384457 108 ntBASIC5.58□□□□□ -1.52
SSX4O60224 YWHAZP6-201ENST00000399764 738 ntBASIC5.58□□□□□ -1.52
SSX4O60224 CYP4F30P-202ENST00000420048 405 ntBASIC5.58□□□□□ -1.52
SSX4O60224 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC5.58□□□□□ -1.52
SSX4O60224 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.58□□□□□ -1.52
SSX4O60224 Z68868.1-201ENST00000429048 544 ntBASIC5.58□□□□□ -1.52
SSX4O60224 AC108479.1-201ENST00000431142 427 ntBASIC5.58□□□□□ -1.52
SSX4O60224 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.58□□□□□ -1.52
SSX4O60224 POU5F1P5-201ENST00000445059 658 ntBASIC5.58□□□□□ -1.52
SSX4O60224 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.58□□□□□ -1.52
SSX4O60224 AL020997.1-201ENST00000446554 349 ntBASIC5.58□□□□□ -1.52
SSX4O60224 AC016724.1-201ENST00000453215 421 ntBASIC5.58□□□□□ -1.52
SSX4O60224 RPS27AP3-201ENST00000453803 454 ntBASIC5.58□□□□□ -1.52
SSX4O60224 GLYCTK-AS1-202ENST00000472761 109 ntTSL 5 BASIC5.58□□□□□ -1.52
SSX4O60224 SELENOT-204ENST00000480740 783 ntTSL 3 BASIC5.58□□□□□ -1.52
SSX4O60224 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SSX4O60224 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.58□□□□□ -1.52
SSX4O60224 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.58□□□□□ -1.52
SSX4O60224 AC008945.1-201ENST00000505144 499 ntBASIC5.58□□□□□ -1.52
SSX4O60224 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.58□□□□□ -1.52
SSX4O60224 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC5.58□□□□□ -1.52
SSX4O60224 HSD3BP3-201ENST00000514706 994 ntBASIC5.58□□□□□ -1.52
SSX4O60224 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.58□□□□□ -1.52
SSX4O60224 AC136777.2-201ENST00000522979 358 ntBASIC5.58□□□□□ -1.52
SSX4O60224 LINC02420-201ENST00000543387 741 ntTSL 5 BASIC5.58□□□□□ -1.52
SSX4O60224 AC106785.4-201ENST00000569492 412 ntBASIC5.58□□□□□ -1.52
SSX4O60224 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC5.58□□□□□ -1.52
SSX4O60224 AC005544.1-201ENST00000584277 460 ntTSL 3 BASIC5.58□□□□□ -1.52
SSX4O60224 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
SSX4O60224 SMIM12P1-201ENST00000603004 274 ntBASIC5.58□□□□□ -1.52
SSX4O60224 AL356986.1-201ENST00000604085 341 ntBASIC5.58□□□□□ -1.52
SSX4O60224 AL135999.3-201ENST00000610501 812 ntBASIC5.58□□□□□ -1.52
SSX4O60224 AC006213.5-201ENST00000619673 288 ntBASIC5.58□□□□□ -1.52
SSX4O60224 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
SSX4O60224 MRPL57P1-201ENST00000621486 265 ntBASIC5.58□□□□□ -1.52
SSX4O60224 AP001962.1-201ENST00000624114 559 ntBASIC5.58□□□□□ -1.52
SSX4O60224 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC5.58□□□□□ -1.52
SSX4O60224 GTF2IP4-201ENST00000453092 2054 ntBASIC5.58□□□□□ -1.52
SSX4O60224 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SSX4O60224 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSX4O60224 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SSX4O60224 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
SSX4O60224 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
SSX4O60224 PTPN2-212ENST00000591497 3390 ntTSL 5 BASIC5.58□□□□□ -1.52
SSX4O60224 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.58□□□□□ -1.52
SSX4O60224 AC005702.3-201ENST00000585345 1447 ntBASIC5.57□□□□□ -1.52
SSX4O60224 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SSX4O60224 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SSX4O60224 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC5.57□□□□□ -1.52
SSX4O60224 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SSX4O60224 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SSX4O60224 TTTY4B-201ENST00000420149 1346 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SSX4O60224 TTTY4-201ENST00000436568 1346 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SSX4O60224 TTTY4C-201ENST00000456123 1346 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SSX4O60224 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.57□□□□□ -1.52
SSX4O60224 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
SSX4O60224 IKZF2-210ENST00000451136 9344 ntTSL 5 BASIC5.57□□□□□ -1.52
SSX4O60224 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC5.57□□□□□ -1.52
SSX4O60224 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
SSX4O60224 RN7SKP269-201ENST00000365545 319 ntBASIC5.57□□□□□ -1.52
SSX4O60224 RN7SKP240-201ENST00000410583 375 ntBASIC5.57□□□□□ -1.52
SSX4O60224 U3.43-201ENST00000410734 213 ntBASIC5.57□□□□□ -1.52
SSX4O60224 AL356968.2-201ENST00000412769 1257 ntBASIC5.57□□□□□ -1.52
SSX4O60224 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC5.57□□□□□ -1.52
SSX4O60224 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.57□□□□□ -1.52
SSX4O60224 AC099782.1-201ENST00000425889 474 ntBASIC5.57□□□□□ -1.52
SSX4O60224 AC062021.1-201ENST00000429008 557 ntTSL 4 BASIC5.57□□□□□ -1.52
SSX4O60224 AL389925.1-201ENST00000432257 728 ntBASIC5.57□□□□□ -1.52
SSX4O60224 AC069154.1-201ENST00000432914 542 ntBASIC5.57□□□□□ -1.52
SSX4O60224 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.57□□□□□ -1.52
SSX4O60224 AC079922.1-201ENST00000443291 359 ntBASIC5.57□□□□□ -1.52
SSX4O60224 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.57□□□□□ -1.52
SSX4O60224 AC092967.1-201ENST00000449016 481 ntBASIC5.57□□□□□ -1.52
SSX4O60224 SNX18P26-201ENST00000458433 740 ntBASIC5.57□□□□□ -1.52
SSX4O60224 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.57□□□□□ -1.52
SSX4O60224 AC025181.1-201ENST00000477507 416 ntBASIC5.57□□□□□ -1.52
SSX4O60224 OR9N1P-201ENST00000491296 333 ntBASIC5.57□□□□□ -1.52
SSX4O60224 RPL19P11-201ENST00000495944 589 ntBASIC5.57□□□□□ -1.52
SSX4O60224 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC5.57□□□□□ -1.52
SSX4O60224 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.57□□□□□ -1.52
SSX4O60224 AC108103.1-201ENST00000511286 446 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 68.2 ms