Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.1□□□□□ -1.43
SMAD6O43541 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SMAD6O43541 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.1□□□□□ -1.43
SMAD6O43541 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SMAD6O43541 RN7SKP151-201ENST00000410230 316 ntBASIC6.1□□□□□ -1.43
SMAD6O43541 HMGN1P20-201ENST00000411849 300 ntBASIC6.1□□□□□ -1.43
SMAD6O43541 DPPA2P2-201ENST00000418220 897 ntBASIC6.1□□□□□ -1.43
SMAD6O43541 LINC01820-201ENST00000418415 570 ntTSL 2 BASIC6.1□□□□□ -1.43
SMAD6O43541 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.1□□□□□ -1.43
SMAD6O43541 BX323845.3-201ENST00000428215 527 ntBASIC6.1□□□□□ -1.43
SMAD6O43541 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC6.1□□□□□ -1.43
SMAD6O43541 AC079922.1-201ENST00000443291 359 ntBASIC6.1□□□□□ -1.43
SMAD6O43541 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC6.1□□□□□ -1.43
SMAD6O43541 AL358876.1-201ENST00000453364 1075 ntBASIC6.1□□□□□ -1.43
SMAD6O43541 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.1□□□□□ -1.43
SMAD6O43541 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC6.1□□□□□ -1.43
SMAD6O43541 RN7SL352P-201ENST00000466002 277 ntBASIC6.1□□□□□ -1.43
SMAD6O43541 AC128716.1-201ENST00000475129 166 ntBASIC6.1□□□□□ -1.43
SMAD6O43541 AC083795.1-201ENST00000491760 320 ntBASIC6.1□□□□□ -1.43
SMAD6O43541 AC112206.4-201ENST00000515142 405 ntBASIC6.1□□□□□ -1.43
SMAD6O43541 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC6.1□□□□□ -1.43
SMAD6O43541 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC6.1□□□□□ -1.43
SMAD6O43541 AC211433.1-206ENST00000595409 733 ntTSL 5 BASIC6.1□□□□□ -1.43
SMAD6O43541 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.1□□□□□ -1.43
SMAD6O43541 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.1□□□□□ -1.43
SMAD6O43541 AC027243.2-201ENST00000602530 724 ntBASIC6.1□□□□□ -1.43
SMAD6O43541 AC092474.3-201ENST00000603022 568 ntBASIC6.1□□□□□ -1.43
SMAD6O43541 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC6.1□□□□□ -1.43
SMAD6O43541 AL021918.2-201ENST00000613415 194 ntBASIC6.1□□□□□ -1.43
SMAD6O43541 AL137246.2-201ENST00000613439 662 ntBASIC6.1□□□□□ -1.43
SMAD6O43541 CLPS-202ENST00000616014 436 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SMAD6O43541 SNX18P12-201ENST00000624821 759 ntBASIC6.1□□□□□ -1.43
SMAD6O43541 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC6.1□□□□□ -1.43
SMAD6O43541 SPRY3-201ENST00000302805 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SMAD6O43541 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SMAD6O43541 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
SMAD6O43541 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC6.1□□□□□ -1.43
SMAD6O43541 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.1□□□□□ -1.43
SMAD6O43541 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
SMAD6O43541 AC012254.3-201ENST00000591183 2117 ntBASIC6.1□□□□□ -1.43
SMAD6O43541 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC6.1□□□□□ -1.43
SMAD6O43541 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SMAD6O43541 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SMAD6O43541 AC016583.1-201ENST00000624221 2431 ntBASIC6.09□□□□□ -1.43
SMAD6O43541 NCAPG2-202ENST00000409339 5253 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SMAD6O43541 AC134980.1-209ENST00000639059 2317 ntTSL 2 BASIC6.09□□□□□ -1.43
SMAD6O43541 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SMAD6O43541 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.09□□□□□ -1.43
SMAD6O43541 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SMAD6O43541 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
SMAD6O43541 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SMAD6O43541 OR6K3-202ENST00000368146 996 ntBASIC6.09□□□□□ -1.43
SMAD6O43541 SNORA70.9-201ENST00000384370 135 ntBASIC6.09□□□□□ -1.43
SMAD6O43541 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
SMAD6O43541 AL451046.1-201ENST00000406097 534 ntBASIC6.09□□□□□ -1.43
SMAD6O43541 SLC20A1P1-201ENST00000413906 956 ntBASIC6.09□□□□□ -1.43
SMAD6O43541 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6.09□□□□□ -1.43
SMAD6O43541 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC6.09□□□□□ -1.43
SMAD6O43541 BX284632.2-201ENST00000421091 399 ntBASIC6.09□□□□□ -1.43
SMAD6O43541 NMD3P2-201ENST00000421815 761 ntBASIC6.09□□□□□ -1.43
SMAD6O43541 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.09□□□□□ -1.43
SMAD6O43541 SETP10-201ENST00000424368 814 ntBASIC6.09□□□□□ -1.43
SMAD6O43541 AC245884.2-201ENST00000426257 404 ntBASIC6.09□□□□□ -1.43
SMAD6O43541 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC6.09□□□□□ -1.43
SMAD6O43541 AC097523.2-201ENST00000435551 652 ntBASIC6.09□□□□□ -1.43
SMAD6O43541 PCBP2P1-201ENST00000437262 977 ntBASIC6.09□□□□□ -1.43
SMAD6O43541 AP000949.1-201ENST00000438328 629 ntBASIC6.09□□□□□ -1.43
SMAD6O43541 AL512605.1-202ENST00000441919 381 ntBASIC6.09□□□□□ -1.43
SMAD6O43541 AL359955.2-201ENST00000445380 353 ntBASIC6.09□□□□□ -1.43
SMAD6O43541 AC132807.1-201ENST00000449613 458 ntTSL 3 BASIC6.09□□□□□ -1.43
SMAD6O43541 GEMIN2P1-201ENST00000454246 752 ntBASIC6.09□□□□□ -1.43
SMAD6O43541 RAB28P2-201ENST00000454299 641 ntBASIC6.09□□□□□ -1.43
SMAD6O43541 AC018635.1-201ENST00000468292 1030 ntBASIC6.09□□□□□ -1.43
SMAD6O43541 ATXN3-206ENST00000502250 1259 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SMAD6O43541 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.09□□□□□ -1.43
SMAD6O43541 AC111000.5-201ENST00000506559 1178 ntBASIC6.09□□□□□ -1.43
SMAD6O43541 AC090568.1-201ENST00000509499 856 ntBASIC6.09□□□□□ -1.43
SMAD6O43541 SCARNA18.1-201ENST00000516330 83 ntBASIC6.09□□□□□ -1.43
SMAD6O43541 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SMAD6O43541 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.09□□□□□ -1.43
SMAD6O43541 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC6.09□□□□□ -1.43
SMAD6O43541 AC130371.1-201ENST00000577023 230 ntTSL 5 BASIC6.09□□□□□ -1.43
SMAD6O43541 AC098850.3-201ENST00000577569 771 ntTSL 3 BASIC6.09□□□□□ -1.43
SMAD6O43541 MIR4776-2-201ENST00000580204 80 ntBASIC6.09□□□□□ -1.43
SMAD6O43541 AC011458.1-201ENST00000604034 617 ntBASIC6.09□□□□□ -1.43
SMAD6O43541 AC017076.1-201ENST00000607613 578 ntBASIC6.09□□□□□ -1.43
SMAD6O43541 AP001962.1-201ENST00000624114 559 ntBASIC6.09□□□□□ -1.43
SMAD6O43541 AC090506.2-201ENST00000624521 419 ntBASIC6.09□□□□□ -1.43
SMAD6O43541 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC6.09□□□□□ -1.43
SMAD6O43541 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC6.09□□□□□ -1.43
SMAD6O43541 AC132825.8-201ENST00000640783 297 ntBASIC6.09□□□□□ -1.43
SMAD6O43541 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
SMAD6O43541 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
SMAD6O43541 MPDZ-202ENST00000319217 7722 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
SMAD6O43541 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
SMAD6O43541 MARCH6-201ENST00000274140 9569 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
SMAD6O43541 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC6.09□□□□□ -1.43
SMAD6O43541 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.09□□□□□ -1.43
SMAD6O43541 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
SMAD6O43541 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms