Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.69□□□□□ -1.5
SLC28A1O00337 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC5.69□□□□□ -1.5
SLC28A1O00337 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC5.69□□□□□ -1.5
SLC28A1O00337 AL450263.1-202ENST00000453199 643 ntTSL 3 BASIC5.69□□□□□ -1.5
SLC28A1O00337 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.69□□□□□ -1.5
SLC28A1O00337 RNU1-88P-201ENST00000459274 128 ntBASIC5.69□□□□□ -1.5
SLC28A1O00337 AC104849.1-201ENST00000462623 405 ntBASIC5.69□□□□□ -1.5
SLC28A1O00337 AC005017.1-201ENST00000482002 490 ntBASIC5.69□□□□□ -1.5
SLC28A1O00337 RPL38P3-201ENST00000484463 213 ntBASIC5.69□□□□□ -1.5
SLC28A1O00337 RPS27P20-201ENST00000492051 246 ntBASIC5.69□□□□□ -1.5
SLC28A1O00337 AC008629.2-201ENST00000503783 483 ntBASIC5.69□□□□□ -1.5
SLC28A1O00337 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.69□□□□□ -1.5
SLC28A1O00337 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.69□□□□□ -1.5
SLC28A1O00337 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.69□□□□□ -1.5
SLC28A1O00337 AP000722.1-201ENST00000531176 775 ntTSL 3 BASIC5.69□□□□□ -1.5
SLC28A1O00337 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SLC28A1O00337 OLR1-209ENST00000543993 822 ntTSL 2 BASIC5.69□□□□□ -1.5
SLC28A1O00337 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.69□□□□□ -1.5
SLC28A1O00337 MTND2P17-201ENST00000550281 688 ntBASIC5.69□□□□□ -1.5
SLC28A1O00337 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC5.69□□□□□ -1.5
SLC28A1O00337 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC5.69□□□□□ -1.5
SLC28A1O00337 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.69□□□□□ -1.5
SLC28A1O00337 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.69□□□□□ -1.5
SLC28A1O00337 MRPS21P8-201ENST00000569196 235 ntBASIC5.69□□□□□ -1.5
SLC28A1O00337 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.69□□□□□ -1.5
SLC28A1O00337 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.69□□□□□ -1.5
SLC28A1O00337 MIR4701-201ENST00000583094 63 ntBASIC5.69□□□□□ -1.5
SLC28A1O00337 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.69□□□□□ -1.5
SLC28A1O00337 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.69□□□□□ -1.5
SLC28A1O00337 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.69□□□□□ -1.5
SLC28A1O00337 SNORA35B-201ENST00000607417 129 ntBASIC5.69□□□□□ -1.5
SLC28A1O00337 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.69□□□□□ -1.5
SLC28A1O00337 AL135999.3-201ENST00000610501 812 ntBASIC5.69□□□□□ -1.5
SLC28A1O00337 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
SLC28A1O00337 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.69□□□□□ -1.5
SLC28A1O00337 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC5.69□□□□□ -1.5
SLC28A1O00337 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.69□□□□□ -1.5
SLC28A1O00337 ATM-229ENST00000639953 587 ntTSL 5 BASIC5.69□□□□□ -1.5
SLC28A1O00337 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SLC28A1O00337 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SLC28A1O00337 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SLC28A1O00337 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SLC28A1O00337 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SLC28A1O00337 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
SLC28A1O00337 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.69□□□□□ -1.5
SLC28A1O00337 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
SLC28A1O00337 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
SLC28A1O00337 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SLC28A1O00337 ZNF33B-208ENST00000613419 5843 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
SLC28A1O00337 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SLC28A1O00337 AL161912.4-201ENST00000623889 2468 ntBASIC5.68□□□□□ -1.5
SLC28A1O00337 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SLC28A1O00337 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SLC28A1O00337 RNF213-204ENST00000508628 17730 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
SLC28A1O00337 MAPK10-370ENST00000641943 4117 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
SLC28A1O00337 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SLC28A1O00337 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SLC28A1O00337 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
SLC28A1O00337 AC012078.1-201ENST00000405035 1646 ntBASIC5.68□□□□□ -1.5
SLC28A1O00337 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.68□□□□□ -1.5
SLC28A1O00337 RNA5SP110-201ENST00000362638 115 ntBASIC5.68□□□□□ -1.5
SLC28A1O00337 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
SLC28A1O00337 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SLC28A1O00337 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
SLC28A1O00337 AL445224.1-201ENST00000420595 737 ntTSL 5 BASIC5.68□□□□□ -1.5
SLC28A1O00337 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.68□□□□□ -1.5
SLC28A1O00337 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.68□□□□□ -1.5
SLC28A1O00337 SCP2-207ENST00000435345 894 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SLC28A1O00337 RPL12P49-201ENST00000441100 121 ntBASIC5.68□□□□□ -1.5
SLC28A1O00337 AC007383.1-201ENST00000445875 636 ntBASIC5.68□□□□□ -1.5
SLC28A1O00337 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.68□□□□□ -1.5
SLC28A1O00337 OR52Y1P-201ENST00000452418 828 ntBASIC5.68□□□□□ -1.5
SLC28A1O00337 PPIAP7-201ENST00000454070 489 ntBASIC5.68□□□□□ -1.5
SLC28A1O00337 RPL12P39-201ENST00000455456 496 ntBASIC5.68□□□□□ -1.5
SLC28A1O00337 AC023245.1-201ENST00000468501 517 ntBASIC5.68□□□□□ -1.5
SLC28A1O00337 AC092865.4-201ENST00000477936 615 ntBASIC5.68□□□□□ -1.5
SLC28A1O00337 AC113398.2-201ENST00000507630 558 ntBASIC5.68□□□□□ -1.5
SLC28A1O00337 NACAP5-201ENST00000509863 636 ntBASIC5.68□□□□□ -1.5
SLC28A1O00337 MAST4-IT1-201ENST00000514241 658 ntBASIC5.68□□□□□ -1.5
SLC28A1O00337 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.68□□□□□ -1.5
SLC28A1O00337 YWHAZ-220ENST00000522819 875 ntTSL 3 BASIC5.68□□□□□ -1.5
SLC28A1O00337 AP000620.1-201ENST00000527147 504 ntBASIC5.68□□□□□ -1.5
SLC28A1O00337 LINC02422-201ENST00000535163 852 ntTSL 3 BASIC5.68□□□□□ -1.5
SLC28A1O00337 CCDC58P1-201ENST00000578567 430 ntBASIC5.68□□□□□ -1.5
SLC28A1O00337 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC5.68□□□□□ -1.5
SLC28A1O00337 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC5.68□□□□□ -1.5
SLC28A1O00337 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.68□□□□□ -1.5
SLC28A1O00337 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SLC28A1O00337 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.68□□□□□ -1.5
SLC28A1O00337 WBP1LP12-201ENST00000604449 331 ntBASIC5.68□□□□□ -1.5
SLC28A1O00337 C5orf63-208ENST00000607731 478 ntTSL 5 BASIC5.68□□□□□ -1.5
SLC28A1O00337 AL356752.1-201ENST00000615844 593 ntBASIC5.68□□□□□ -1.5
SLC28A1O00337 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC5.68□□□□□ -1.5
SLC28A1O00337 AC241377.1-201ENST00000619797 406 ntBASIC5.68□□□□□ -1.5
SLC28A1O00337 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SLC28A1O00337 AC005899.6-201ENST00000620729 297 ntBASIC5.68□□□□□ -1.5
SLC28A1O00337 AL138693.1-201ENST00000622219 129 ntBASIC5.68□□□□□ -1.5
SLC28A1O00337 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SLC28A1O00337 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC5.68□□□□□ -1.5
SLC28A1O00337 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms