Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 AC130360.2-201ENST00000533477 1556 ntBASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 SLFN5-201ENST00000299977 10591 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 KCNJ1-204ENST00000392665 4074 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC092070.2-203ENST00000598377 3644 ntBASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 IGLV3-10-201ENST00000390315 382 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 RN7SKP166-201ENST00000410812 305 ntBASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC245096.1-201ENST00000413104 546 ntBASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 SLC20A1P1-201ENST00000413906 956 ntBASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 PTCD2P2-201ENST00000415579 1095 ntBASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 USP24P1-201ENST00000433802 779 ntBASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 KRT8P51-201ENST00000438938 274 ntBASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 CUBNP2-201ENST00000443534 1139 ntBASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 TRIM60P16-201ENST00000444048 694 ntBASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 FTLP8-201ENST00000446770 267 ntBASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AL359839.1-201ENST00000451975 1160 ntBASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 RNA5SP434-201ENST00000516647 121 ntBASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 RNA5SP271-201ENST00000516700 88 ntBASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC060775.1-201ENST00000518241 520 ntBASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 WBP1LP3-201ENST00000523033 208 ntBASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 BICD1-206ENST00000551086 423 ntTSL 3 BASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 RNU4ATAC-201ENST00000580972 127 ntBASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC090236.2-201ENST00000587933 1101 ntBASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC068768.2-201ENST00000602352 343 ntBASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AL645933.2-201ENST00000606743 1207 ntBASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AL591167.1-201ENST00000607321 456 ntBASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC096708.4-201ENST00000620563 552 ntBASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AL121839.2-201ENST00000565058 6943 ntBASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC239868.2-201ENST00000564237 4527 ntBASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AL359955.1-201ENST00000455242 3275 ntBASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC4.78□□□□□ -1.64
TCRBV4S1A1TA0A5B7 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC4.77□□□□□ -1.65
TCRBV4S1A1TA0A5B7 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TCRBV4S1A1TA0A5B7 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AC022325.1-201ENST00000502748 2199 ntBASIC4.77□□□□□ -1.65
TCRBV4S1A1TA0A5B7 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TCRBV4S1A1TA0A5B7 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
TCRBV4S1A1TA0A5B7 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
TCRBV4S1A1TA0A5B7 FAM162A-201ENST00000232125 801 ntTSL 2 BASIC4.77□□□□□ -1.65
TCRBV4S1A1TA0A5B7 OR7E25P-201ENST00000344844 931 ntBASIC4.77□□□□□ -1.65
TCRBV4S1A1TA0A5B7 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TCRBV4S1A1TA0A5B7 CLEC4A-204ENST00000360500 597 ntTSL 5 BASIC4.77□□□□□ -1.65
TCRBV4S1A1TA0A5B7 RNA5SP375-201ENST00000362975 119 ntBASIC4.77□□□□□ -1.65
TCRBV4S1A1TA0A5B7 RN7SKP78-201ENST00000364711 318 ntBASIC4.77□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC4.77□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AC068286.1-201ENST00000416173 467 ntTSL 4 BASIC4.77□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.77□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC4.77□□□□□ -1.65
TCRBV4S1A1TA0A5B7 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC4.77□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC4.77□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC4.77□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC4.77□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AC000095.2-201ENST00000424407 768 ntTSL 2 BASIC4.77□□□□□ -1.65
TCRBV4S1A1TA0A5B7 MRPS21P2-201ENST00000424704 264 ntBASIC4.77□□□□□ -1.65
TCRBV4S1A1TA0A5B7 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.77□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC4.77□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AC005077.1-201ENST00000449226 375 ntBASIC4.77□□□□□ -1.65
TCRBV4S1A1TA0A5B7 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC4.77□□□□□ -1.65
TCRBV4S1A1TA0A5B7 OSTCP1-201ENST00000455507 450 ntBASIC4.77□□□□□ -1.65
TCRBV4S1A1TA0A5B7 CST12P-201ENST00000457644 362 ntBASIC4.77□□□□□ -1.65
TCRBV4S1A1TA0A5B7 RPL7P51-201ENST00000490532 749 ntBASIC4.77□□□□□ -1.65
TCRBV4S1A1TA0A5B7 snoU109.5-201ENST00000516231 132 ntBASIC4.77□□□□□ -1.65
TCRBV4S1A1TA0A5B7 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC4.77□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC4.77□□□□□ -1.65
TCRBV4S1A1TA0A5B7 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 74.8 ms