Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 ENSA-201ENST00000271690 2818 ntAPPRIS ALT1 TSL 1 (best) BASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 CBX3P1-201ENST00000325243 554 ntBASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 NPM1P11-201ENST00000417106 855 ntBASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 AC006960.1-201ENST00000419980 153 ntBASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 AC009480.2-201ENST00000422916 432 ntBASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 AL513174.1-201ENST00000423182 629 ntBASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 ISCA1P1-201ENST00000426679 387 ntBASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 AL158212.1-201ENST00000428766 315 ntTSL 5 BASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 FGF12-202ENST00000430714 603 ntTSL 2 BASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 AC007000.2-201ENST00000442564 487 ntBASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 AC138207.1-201ENST00000442757 545 ntTSL 3 BASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 AC020779.1-201ENST00000478757 796 ntBASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 AC069304.1-201ENST00000491593 704 ntBASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 AC096751.1-202ENST00000502691 1067 ntBASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 RNU6-264P-201ENST00000517134 104 ntBASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 ERP27-202ENST00000540097 993 ntTSL 2 BASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 ROCK1P1-201ENST00000573767 549 ntBASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 HMGB1P51-201ENST00000605166 638 ntBASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 AC099785.1-201ENST00000605697 437 ntBASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 RNU6ATAC35P-201ENST00000609276 444 ntBASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 AC009704.2-201ENST00000618739 483 ntBASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 AL596275.2-207ENST00000641188 675 ntBASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 AC013562.1-201ENST00000519427 1722 ntTSL 2 BASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 AC012618.3-201ENST00000415793 2042 ntTSL 5 BASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 NME8-201ENST00000199447 2312 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 CEP85-201ENST00000252992 3935 ntAPPRIS P3 TSL 1 (best) BASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 C11orf63-203ENST00000531316 2782 ntAPPRIS P1 TSL 2 BASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 ATM-215ENST00000530958 5718 ntTSL 2 BASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 SLC9A4-201ENST00000295269 4138 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 FBXL13-208ENST00000456695 1605 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 RPS2P45-201ENST00000469997 2057 ntBASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 DPCR1-201ENST00000304311 2658 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC9.27□□□□□ -0.93
PDZRN3Q9UPQ7 GABPB2-201ENST00000368916 1680 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 KLHL7-203ENST00000409689 3231 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 CACNB4-270ENST00000638040 2026 ntTSL 5 BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 LINC02044-201ENST00000490139 2502 ntTSL 2 BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 CLRN1-202ENST00000327047 2359 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 MTCO1P18-201ENST00000455518 1419 ntBASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 PSG9-206ENST00000593948 1429 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 DEFB119-201ENST00000339144 484 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 RPL7-201ENST00000352983 1101 ntAPPRIS P1 TSL 1 (best) BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 PPIAP22-201ENST00000358455 498 ntBASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 IGFL2-201ENST00000377693 607 ntAPPRIS ALT2 TSL 1 (best) BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 ATP5E-203ENST00000395663 697 ntAPPRIS P1 TSL 2 BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 C1D-203ENST00000409302 772 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 FNDC3CP-201ENST00000420795 1155 ntBASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 AC104651.1-201ENST00000427559 735 ntBASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 AC073900.1-201ENST00000429766 776 ntBASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 RNU6-956P-201ENST00000458868 103 ntBASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 AC084754.1-201ENST00000463466 464 ntBASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 AC004924.1-201ENST00000480160 781 ntBASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 PDCL3P4-201ENST00000489621 720 ntBASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 AL117692.1-201ENST00000494283 713 ntBASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 AC112206.2-201ENST00000503106 557 ntTSL 4 BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 OR7E163P-201ENST00000505943 894 ntBASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 NACAP6-201ENST00000509572 622 ntBASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 AC092593.2-201ENST00000513866 913 ntBASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 RNU6-327P-201ENST00000516270 127 ntBASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 RNU6-405P-201ENST00000516637 110 ntBASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 AC067904.2-201ENST00000517322 1283 ntBASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 NDUFA5P2-201ENST00000519723 344 ntBASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 AP000442.2-201ENST00000531108 440 ntTSL 3 BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 LINC02384-207ENST00000542875 551 ntTSL 4 BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 AC002400.1-201ENST00000569310 726 ntBASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 WDR45BP1-201ENST00000583470 1029 ntBASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 ELSPBP1-205ENST00000597519 557 ntTSL 3 BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 AC053481.5-201ENST00000602932 397 ntAPPRIS P1 TSL 5 BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 AC092032.1-201ENST00000603090 165 ntBASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 AL022154.1-201ENST00000604698 785 ntBASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 FAM13A-AS1_2.1-201ENST00000611121 108 ntBASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 AC012629.3-201ENST00000623397 328 ntBASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 AC093875.1-201ENST00000623688 504 ntBASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 UGP2-231ENST00000627474 264 ntTSL 5 BASIC9.26□□□□□ -0.93
PDZRN3Q9UPQ7 LINC01232-205ENST00000630421 1002 ntTSL 1 (best) BASIC9.26□□□□□ -0.93
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms