Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 RNA5SP251-201ENST00000410614 137 ntBASIC5.56□□□□□ -1.52
NPIPA1Q9UND3 RANP7-201ENST00000418085 644 ntBASIC5.56□□□□□ -1.52
NPIPA1Q9UND3 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.56□□□□□ -1.52
NPIPA1Q9UND3 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.56□□□□□ -1.52
NPIPA1Q9UND3 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC5.56□□□□□ -1.52
NPIPA1Q9UND3 GAPDHP23-201ENST00000444823 993 ntBASIC5.56□□□□□ -1.52
NPIPA1Q9UND3 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC5.56□□□□□ -1.52
NPIPA1Q9UND3 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.56□□□□□ -1.52
NPIPA1Q9UND3 RN7SL101P-201ENST00000496350 279 ntBASIC5.56□□□□□ -1.52
NPIPA1Q9UND3 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NPIPA1Q9UND3 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.56□□□□□ -1.52
NPIPA1Q9UND3 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NPIPA1Q9UND3 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC5.56□□□□□ -1.52
NPIPA1Q9UND3 LINC01579-205ENST00000556447 791 ntTSL 4 BASIC5.56□□□□□ -1.52
NPIPA1Q9UND3 AC007494.1-201ENST00000562293 760 ntBASIC5.56□□□□□ -1.52
NPIPA1Q9UND3 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC5.56□□□□□ -1.52
NPIPA1Q9UND3 AC090651.1-201ENST00000567865 634 ntBASIC5.56□□□□□ -1.52
NPIPA1Q9UND3 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.56□□□□□ -1.52
NPIPA1Q9UND3 AP000894.4-201ENST00000610185 483 ntBASIC5.56□□□□□ -1.52
NPIPA1Q9UND3 AC127024.6-201ENST00000621598 424 ntBASIC5.56□□□□□ -1.52
NPIPA1Q9UND3 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC5.56□□□□□ -1.52
NPIPA1Q9UND3 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NPIPA1Q9UND3 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NPIPA1Q9UND3 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.56□□□□□ -1.52
NPIPA1Q9UND3 AL359091.1-201ENST00000449048 1734 ntBASIC5.56□□□□□ -1.52
NPIPA1Q9UND3 AC011416.1-201ENST00000514947 1732 ntBASIC5.56□□□□□ -1.52
NPIPA1Q9UND3 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NPIPA1Q9UND3 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NPIPA1Q9UND3 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.56□□□□□ -1.52
NPIPA1Q9UND3 C16orf62-204ENST00000448695 3353 ntTSL 5 BASIC5.56□□□□□ -1.52
NPIPA1Q9UND3 C16orf62-216ENST00000543152 3352 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NPIPA1Q9UND3 Z95114.1-201ENST00000624264 14574 ntBASIC5.56□□□□□ -1.52
NPIPA1Q9UND3 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
NPIPA1Q9UND3 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC5.56□□□□□ -1.52
NPIPA1Q9UND3 SGMS2-203ENST00000394686 2127 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
NPIPA1Q9UND3 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 PDE1A-204ENST00000410103 2000 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 SNORA51.1-201ENST00000363243 140 ntBASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 RN7SKP186-201ENST00000365371 303 ntBASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 NPM1P38-201ENST00000403835 865 ntBASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 AL512422.1-201ENST00000407033 553 ntBASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 RN7SKP151-201ENST00000410230 316 ntBASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 ZNF619P1-201ENST00000446539 752 ntBASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 AC112187.1-201ENST00000455837 479 ntBASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 NXT1P1-201ENST00000458481 316 ntBASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 AC073594.1-201ENST00000462065 364 ntBASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 WBP1LP3-201ENST00000523033 208 ntBASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 AC009097.1-201ENST00000567077 406 ntTSL 3 BASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 OOSP1P2-201ENST00000579644 351 ntBASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 LINC01320-205ENST00000604250 857 ntTSL 5 BASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 AC008555.7-201ENST00000605008 583 ntBASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 AL645933.2-201ENST00000606743 1207 ntBASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 RSU1P2-204ENST00000619977 1240 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 AL136228.1-201ENST00000622221 319 ntBASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 5S_rRNA.28-201ENST00000638107 119 ntBASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 AF287957.1-201ENST00000607368 1595 ntBASIC5.55□□□□□ -1.52
NPIPA1Q9UND3 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 AC140479.2-201ENST00000421567 3130 ntBASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 KCNMB2-210ENST00000617329 2214 ntTSL 2 BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 OR52B3P-201ENST00000314715 928 ntBASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 RNA5SP375-201ENST00000362975 119 ntBASIC5.54□□□□□ -1.52
NPIPA1Q9UND3 FAM66C-201ENST00000372173 678 ntTSL 5 BASIC5.54□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 135.4 ms