Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.83□□□□□ -1.48
TREX1Q9NSU2 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC5.83□□□□□ -1.48
TREX1Q9NSU2 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
TREX1Q9NSU2 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
TREX1Q9NSU2 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC5.83□□□□□ -1.48
TREX1Q9NSU2 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TREX1Q9NSU2 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TREX1Q9NSU2 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC5.82□□□□□ -1.48
TREX1Q9NSU2 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TREX1Q9NSU2 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC5.82□□□□□ -1.48
TREX1Q9NSU2 OR14A16-202ENST00000641093 1367 ntAPPRIS P1 BASIC5.82□□□□□ -1.48
TREX1Q9NSU2 AC138907.8-201ENST00000623981 2256 ntBASIC5.82□□□□□ -1.48
TREX1Q9NSU2 LRRC49-223ENST00000560369 2586 ntAPPRIS ALT1 TSL 2 BASIC5.82□□□□□ -1.48
TREX1Q9NSU2 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TREX1Q9NSU2 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TREX1Q9NSU2 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TREX1Q9NSU2 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TREX1Q9NSU2 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.82□□□□□ -1.48
TREX1Q9NSU2 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.82□□□□□ -1.48
TREX1Q9NSU2 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC5.82□□□□□ -1.48
TREX1Q9NSU2 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC5.82□□□□□ -1.48
TREX1Q9NSU2 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TREX1Q9NSU2 RNA5SP500-201ENST00000364486 119 ntBASIC5.82□□□□□ -1.48
TREX1Q9NSU2 RPL11P3-201ENST00000395256 523 ntBASIC5.82□□□□□ -1.48
TREX1Q9NSU2 RN7SKP29-201ENST00000410957 272 ntBASIC5.82□□□□□ -1.48
TREX1Q9NSU2 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.82□□□□□ -1.48
TREX1Q9NSU2 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC5.82□□□□□ -1.48
TREX1Q9NSU2 CLNS1AP1-201ENST00000435954 682 ntBASIC5.82□□□□□ -1.48
TREX1Q9NSU2 GAPDHP48-201ENST00000436626 961 ntBASIC5.82□□□□□ -1.48
TREX1Q9NSU2 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.82□□□□□ -1.48
TREX1Q9NSU2 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.82□□□□□ -1.48
TREX1Q9NSU2 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC5.82□□□□□ -1.48
TREX1Q9NSU2 AC093166.4-201ENST00000457867 318 ntBASIC5.82□□□□□ -1.48
TREX1Q9NSU2 AC068228.1-201ENST00000461723 211 ntBASIC5.82□□□□□ -1.48
TREX1Q9NSU2 SETP21-201ENST00000514799 892 ntBASIC5.82□□□□□ -1.48
TREX1Q9NSU2 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TREX1Q9NSU2 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.82□□□□□ -1.48
TREX1Q9NSU2 AC006512.2-201ENST00000543250 486 ntBASIC5.82□□□□□ -1.48
TREX1Q9NSU2 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.82□□□□□ -1.48
TREX1Q9NSU2 AC006530.1-201ENST00000555980 571 ntBASIC5.82□□□□□ -1.48
TREX1Q9NSU2 AL356801.1-201ENST00000559320 294 ntBASIC5.82□□□□□ -1.48
TREX1Q9NSU2 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC5.82□□□□□ -1.48
TREX1Q9NSU2 HIRAP1-201ENST00000605318 787 ntBASIC5.82□□□□□ -1.48
TREX1Q9NSU2 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TREX1Q9NSU2 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TREX1Q9NSU2 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TREX1Q9NSU2 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.82□□□□□ -1.48
TREX1Q9NSU2 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC5.82□□□□□ -1.48
TREX1Q9NSU2 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.82□□□□□ -1.48
TREX1Q9NSU2 EPS8-207ENST00000540613 2204 ntTSL 2 BASIC5.82□□□□□ -1.48
TREX1Q9NSU2 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TREX1Q9NSU2 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TREX1Q9NSU2 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.81□□□□□ -1.48
TREX1Q9NSU2 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.81□□□□□ -1.48
TREX1Q9NSU2 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.81□□□□□ -1.48
TREX1Q9NSU2 AC117409.1-201ENST00000470499 1310 ntBASIC5.81□□□□□ -1.48
TREX1Q9NSU2 AP004607.3-201ENST00000530354 3915 ntBASIC5.81□□□□□ -1.48
TREX1Q9NSU2 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.81□□□□□ -1.48
TREX1Q9NSU2 LYARP1-201ENST00000436977 1501 ntBASIC5.81□□□□□ -1.48
TREX1Q9NSU2 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TREX1Q9NSU2 METTL5-202ENST00000308099 629 ntTSL 3 BASIC5.81□□□□□ -1.48
TREX1Q9NSU2 RNA5SP514-201ENST00000363717 111 ntBASIC5.81□□□□□ -1.48
TREX1Q9NSU2 RNU1-65P-201ENST00000363919 148 ntBASIC5.81□□□□□ -1.48
TREX1Q9NSU2 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.81□□□□□ -1.48
TREX1Q9NSU2 VN1R21P-201ENST00000426703 765 ntBASIC5.81□□□□□ -1.48
TREX1Q9NSU2 DEFA9P-201ENST00000433042 285 ntBASIC5.81□□□□□ -1.48
TREX1Q9NSU2 AL031186.1-201ENST00000433125 385 ntTSL 3 BASIC5.81□□□□□ -1.48
TREX1Q9NSU2 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC5.81□□□□□ -1.48
TREX1Q9NSU2 AC118758.1-202ENST00000454719 225 ntBASIC5.81□□□□□ -1.48
TREX1Q9NSU2 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.81□□□□□ -1.48
TREX1Q9NSU2 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC5.81□□□□□ -1.48
TREX1Q9NSU2 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.81□□□□□ -1.48
TREX1Q9NSU2 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.81□□□□□ -1.48
TREX1Q9NSU2 TPPP2-208ENST00000530140 703 ntAPPRIS P1 TSL 2 BASIC5.81□□□□□ -1.48
TREX1Q9NSU2 TMEM126B-211ENST00000534341 1273 ntTSL 2 BASIC5.81□□□□□ -1.48
TREX1Q9NSU2 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.81□□□□□ -1.48
TREX1Q9NSU2 ZNF322P1-201ENST00000568013 1209 ntBASIC5.81□□□□□ -1.48
TREX1Q9NSU2 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.81□□□□□ -1.48
TREX1Q9NSU2 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.81□□□□□ -1.48
TREX1Q9NSU2 AC002310.3-201ENST00000569728 723 ntBASIC5.81□□□□□ -1.48
TREX1Q9NSU2 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC5.81□□□□□ -1.48
TREX1Q9NSU2 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.81□□□□□ -1.48
TREX1Q9NSU2 NANOGP3-201ENST00000605855 286 ntBASIC5.81□□□□□ -1.48
TREX1Q9NSU2 AC244100.4-201ENST00000617747 388 ntBASIC5.81□□□□□ -1.48
TREX1Q9NSU2 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.81□□□□□ -1.48
TREX1Q9NSU2 AL596275.2-207ENST00000641188 675 ntBASIC5.81□□□□□ -1.48
TREX1Q9NSU2 PAQR5-201ENST00000340965 4943 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TREX1Q9NSU2 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.81□□□□□ -1.48
TREX1Q9NSU2 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.81□□□□□ -1.48
TREX1Q9NSU2 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.81□□□□□ -1.48
TREX1Q9NSU2 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
TREX1Q9NSU2 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC5.81□□□□□ -1.48
TREX1Q9NSU2 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.81□□□□□ -1.48
TREX1Q9NSU2 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.81□□□□□ -1.48
TREX1Q9NSU2 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
TREX1Q9NSU2 AL355488.2-201ENST00000609909 2850 ntBASIC5.81□□□□□ -1.48
TREX1Q9NSU2 ABCB11-201ENST00000263817 4775 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TREX1Q9NSU2 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
TREX1Q9NSU2 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.8□□□□□ -1.48
TREX1Q9NSU2 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC5.8□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 160.9 ms