Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 SLMAP-208ENST00000449503 4027 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CISHQ9NSE2 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CISHQ9NSE2 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CISHQ9NSE2 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CISHQ9NSE2 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CISHQ9NSE2 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CISHQ9NSE2 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC6.18□□□□□ -1.42
CISHQ9NSE2 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CISHQ9NSE2 OOSP1-201ENST00000398992 1270 ntBASIC6.18□□□□□ -1.42
CISHQ9NSE2 OR7E101P-201ENST00000400428 513 ntBASIC6.18□□□□□ -1.42
CISHQ9NSE2 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.18□□□□□ -1.42
CISHQ9NSE2 AC245060.4-201ENST00000413293 1121 ntBASIC6.18□□□□□ -1.42
CISHQ9NSE2 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC6.18□□□□□ -1.42
CISHQ9NSE2 AK4P4-201ENST00000419465 646 ntBASIC6.18□□□□□ -1.42
CISHQ9NSE2 AC068631.1-204ENST00000428501 534 ntTSL 3 BASIC6.18□□□□□ -1.42
CISHQ9NSE2 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC6.18□□□□□ -1.42
CISHQ9NSE2 AP006222.1-205ENST00000450734 457 ntBASIC6.18□□□□□ -1.42
CISHQ9NSE2 AC011476.1-201ENST00000466725 307 ntBASIC6.18□□□□□ -1.42
CISHQ9NSE2 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.18□□□□□ -1.42
CISHQ9NSE2 AC094085.1-201ENST00000468914 584 ntBASIC6.18□□□□□ -1.42
CISHQ9NSE2 AF250324.1-203ENST00000508156 517 ntTSL 3 BASIC6.18□□□□□ -1.42
CISHQ9NSE2 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.18□□□□□ -1.42
CISHQ9NSE2 RNA5SP116-201ENST00000516132 98 ntBASIC6.18□□□□□ -1.42
CISHQ9NSE2 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.18□□□□□ -1.42
CISHQ9NSE2 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.18□□□□□ -1.42
CISHQ9NSE2 AC126615.2-201ENST00000553003 515 ntBASIC6.18□□□□□ -1.42
CISHQ9NSE2 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.18□□□□□ -1.42
CISHQ9NSE2 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.18□□□□□ -1.42
CISHQ9NSE2 DPPA3P2-202ENST00000557188 1219 ntBASIC6.18□□□□□ -1.42
CISHQ9NSE2 AC103968.1-201ENST00000557841 573 ntBASIC6.18□□□□□ -1.42
CISHQ9NSE2 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC6.18□□□□□ -1.42
CISHQ9NSE2 AC009063.2-203ENST00000567860 745 ntTSL 2 BASIC6.18□□□□□ -1.42
CISHQ9NSE2 MIR4260-201ENST00000583107 67 ntBASIC6.18□□□□□ -1.42
CISHQ9NSE2 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC6.18□□□□□ -1.42
CISHQ9NSE2 AP001267.4-201ENST00000602598 545 ntBASIC6.18□□□□□ -1.42
CISHQ9NSE2 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CISHQ9NSE2 AC022400.9-201ENST00000623633 273 ntBASIC6.18□□□□□ -1.42
CISHQ9NSE2 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC6.18□□□□□ -1.42
CISHQ9NSE2 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.18□□□□□ -1.42
CISHQ9NSE2 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CISHQ9NSE2 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
CISHQ9NSE2 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.18□□□□□ -1.42
CISHQ9NSE2 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC6.18□□□□□ -1.42
CISHQ9NSE2 SLC26A5-205ENST00000393723 2174 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CISHQ9NSE2 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.18□□□□□ -1.42
CISHQ9NSE2 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC6.18□□□□□ -1.42
CISHQ9NSE2 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
CISHQ9NSE2 NEPNP-201ENST00000404786 1371 ntBASIC6.18□□□□□ -1.42
CISHQ9NSE2 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.18□□□□□ -1.42
CISHQ9NSE2 AC020656.2-201ENST00000613291 5309 ntBASIC6.18□□□□□ -1.42
CISHQ9NSE2 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CISHQ9NSE2 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CISHQ9NSE2 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC6.17□□□□□ -1.42
CISHQ9NSE2 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
CISHQ9NSE2 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
CISHQ9NSE2 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CISHQ9NSE2 OR52B3P-201ENST00000314715 928 ntBASIC6.17□□□□□ -1.42
CISHQ9NSE2 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC6.17□□□□□ -1.42
CISHQ9NSE2 RNA5SP91-201ENST00000390902 119 ntBASIC6.17□□□□□ -1.42
CISHQ9NSE2 CCL8-201ENST00000394620 1261 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CISHQ9NSE2 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.17□□□□□ -1.42
CISHQ9NSE2 LSM5-203ENST00000409782 649 ntTSL 5 BASIC6.17□□□□□ -1.42
CISHQ9NSE2 SLC20A1P1-201ENST00000413906 956 ntBASIC6.17□□□□□ -1.42
CISHQ9NSE2 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC6.17□□□□□ -1.42
CISHQ9NSE2 KRT8P51-201ENST00000438938 274 ntBASIC6.17□□□□□ -1.42
CISHQ9NSE2 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC6.17□□□□□ -1.42
CISHQ9NSE2 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.17□□□□□ -1.42
CISHQ9NSE2 RPL12P39-201ENST00000455456 496 ntBASIC6.17□□□□□ -1.42
CISHQ9NSE2 ATP5J-207ENST00000457143 589 ntTSL 2 BASIC6.17□□□□□ -1.42
CISHQ9NSE2 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.17□□□□□ -1.42
CISHQ9NSE2 PHC3-208ENST00000481639 1075 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CISHQ9NSE2 AC092916.1-201ENST00000497896 411 ntTSL 3 BASIC6.17□□□□□ -1.42
CISHQ9NSE2 AC087360.1-201ENST00000518788 616 ntBASIC6.17□□□□□ -1.42
CISHQ9NSE2 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.17□□□□□ -1.42
CISHQ9NSE2 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.17□□□□□ -1.42
CISHQ9NSE2 AC090888.3-201ENST00000558917 509 ntBASIC6.17□□□□□ -1.42
CISHQ9NSE2 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.17□□□□□ -1.42
CISHQ9NSE2 AC096996.1-201ENST00000563813 325 ntBASIC6.17□□□□□ -1.42
CISHQ9NSE2 NDUFA5P11-201ENST00000567995 343 ntBASIC6.17□□□□□ -1.42
CISHQ9NSE2 NOL4-202ENST00000535384 1853 ntTSL 2 BASIC6.17□□□□□ -1.42
CISHQ9NSE2 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.17□□□□□ -1.42
CISHQ9NSE2 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
CISHQ9NSE2 TEK-204ENST00000519097 3836 ntTSL 2 BASIC6.17□□□□□ -1.42
CISHQ9NSE2 AC097634.1-201ENST00000604491 2467 ntBASIC6.17□□□□□ -1.42
CISHQ9NSE2 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
CISHQ9NSE2 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.17□□□□□ -1.42
CISHQ9NSE2 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CISHQ9NSE2 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CISHQ9NSE2 STK3-216ENST00000523601 3107 ntTSL 2 BASIC6.16□□□□□ -1.42
CISHQ9NSE2 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CISHQ9NSE2 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
CISHQ9NSE2 SAMD3-204ENST00000439090 2093 ntAPPRIS P1 TSL 2 BASIC6.16□□□□□ -1.42
CISHQ9NSE2 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
CISHQ9NSE2 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CISHQ9NSE2 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
CISHQ9NSE2 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CISHQ9NSE2 PTPRT-201ENST00000356100 12480 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
CISHQ9NSE2 PTPRT-202ENST00000373184 12483 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
CISHQ9NSE2 PTPRT-203ENST00000373187 12453 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
CISHQ9NSE2 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms