Protein–RNA interactions for Protein: Q9NSA3

CTNNBIP1, Beta-catenin-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNBIP1Q9NSA3 AL663074.2-201ENST00000440621 479 ntBASIC4.79□□□□□ -1.64
CTNNBIP1Q9NSA3 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC4.79□□□□□ -1.64
CTNNBIP1Q9NSA3 LDHBP3-201ENST00000514909 822 ntBASIC4.79□□□□□ -1.64
CTNNBIP1Q9NSA3 MIR2117-201ENST00000516780 80 ntBASIC4.79□□□□□ -1.64
CTNNBIP1Q9NSA3 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC4.79□□□□□ -1.64
CTNNBIP1Q9NSA3 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC4.79□□□□□ -1.64
CTNNBIP1Q9NSA3 BMS1P16-201ENST00000556075 1147 ntBASIC4.79□□□□□ -1.64
CTNNBIP1Q9NSA3 AC010531.4-201ENST00000570286 576 ntTSL 4 BASIC4.79□□□□□ -1.64
CTNNBIP1Q9NSA3 AC025283.1-201ENST00000572039 734 ntBASIC4.79□□□□□ -1.64
CTNNBIP1Q9NSA3 AC006120.1-201ENST00000579375 546 ntBASIC4.79□□□□□ -1.64
CTNNBIP1Q9NSA3 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC4.79□□□□□ -1.64
CTNNBIP1Q9NSA3 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC4.79□□□□□ -1.64
CTNNBIP1Q9NSA3 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC4.79□□□□□ -1.64
CTNNBIP1Q9NSA3 ZNF738-205ENST00000597810 747 ntAPPRIS ALT2 TSL 3 BASIC4.79□□□□□ -1.64
CTNNBIP1Q9NSA3 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC4.79□□□□□ -1.64
CTNNBIP1Q9NSA3 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC4.79□□□□□ -1.64
CTNNBIP1Q9NSA3 AC006363.1-201ENST00000603806 463 ntBASIC4.79□□□□□ -1.64
CTNNBIP1Q9NSA3 AL078624.2-201ENST00000605063 554 ntBASIC4.79□□□□□ -1.64
CTNNBIP1Q9NSA3 AL645933.2-201ENST00000606743 1207 ntBASIC4.79□□□□□ -1.64
CTNNBIP1Q9NSA3 Z93930.3-201ENST00000607919 749 ntBASIC4.79□□□□□ -1.64
CTNNBIP1Q9NSA3 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.79□□□□□ -1.64
CTNNBIP1Q9NSA3 LINC01125-249ENST00000627399 1067 ntAPPRIS P5 TSL 5 BASIC4.79□□□□□ -1.64
CTNNBIP1Q9NSA3 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC4.79□□□□□ -1.64
CTNNBIP1Q9NSA3 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
CTNNBIP1Q9NSA3 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC4.79□□□□□ -1.64
CTNNBIP1Q9NSA3 AC217777.1-201ENST00000570034 1471 ntBASIC4.79□□□□□ -1.64
CTNNBIP1Q9NSA3 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTNNBIP1Q9NSA3 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTNNBIP1Q9NSA3 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTNNBIP1Q9NSA3 PLS3-201ENST00000289290 2277 ntTSL 2 BASIC4.79□□□□□ -1.64
CTNNBIP1Q9NSA3 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
CTNNBIP1Q9NSA3 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC4.79□□□□□ -1.64
CTNNBIP1Q9NSA3 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 OR51J1-201ENST00000332043 951 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 MIR27A-201ENST00000385073 78 ntBASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 AL139805.1-201ENST00000407837 289 ntBASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 RNU2-22P-201ENST00000411266 212 ntBASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 RNGTTP1-201ENST00000420965 728 ntBASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 VN1R21P-201ENST00000426703 765 ntBASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 AC099670.2-201ENST00000435130 321 ntBASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 USP12-AS1-201ENST00000440657 268 ntTSL 5 BASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 ZNF619P1-201ENST00000446539 752 ntBASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 AC097359.1-201ENST00000447946 463 ntBASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 TFP1-201ENST00000460564 572 ntTSL 4 BASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 RN7SL197P-201ENST00000466981 299 ntBASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 AC090602.1-201ENST00000469695 252 ntBASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 TFP1-203ENST00000490470 561 ntTSL 4 BASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 WDYHV1-203ENST00000518125 880 ntTSL 2 BASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 OR7E158P-201ENST00000524483 910 ntBASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 AC126615.2-201ENST00000553003 515 ntBASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 AC020704.1-201ENST00000559394 454 ntTSL 3 BASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 AC018946.1-201ENST00000560578 458 ntTSL 5 BASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 AC106729.1-201ENST00000567777 466 ntTSL 3 BASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 AC063977.7-201ENST00000594454 337 ntBASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 AL589765.6-201ENST00000601909 549 ntBASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 AP000654.1-201ENST00000602510 1192 ntTSL 5 BASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 AL512430.4-201ENST00000603085 613 ntBASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 NDUFB9P1-201ENST00000604683 510 ntBASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 IGKV2OR2-1-201ENST00000605129 304 ntBASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 NANOGP3-201ENST00000605855 286 ntBASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 OR51C1P-201ENST00000608504 942 ntBASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 AC015712.7-201ENST00000615211 635 ntBASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 ATM-229ENST00000639953 587 ntTSL 5 BASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 KCNAB1-205ENST00000471742 3301 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 RRP15-201ENST00000366932 7771 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 AC009962.1-201ENST00000567327 3813 ntBASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC4.78□□□□□ -1.64
CTNNBIP1Q9NSA3 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC4.78□□□□□ -1.65
CTNNBIP1Q9NSA3 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.78□□□□□ -1.65
CTNNBIP1Q9NSA3 SEPT7-203ENST00000399035 4066 ntAPPRIS ALT1 TSL 5 BASIC4.77□□□□□ -1.65
CTNNBIP1Q9NSA3 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.77□□□□□ -1.65
CTNNBIP1Q9NSA3 NFAT5-212ENST00000627621 5875 ntAPPRIS ALT1 TSL 2 BASIC4.77□□□□□ -1.65
CTNNBIP1Q9NSA3 RPS2P45-201ENST00000469997 2057 ntBASIC4.77□□□□□ -1.65
CTNNBIP1Q9NSA3 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC4.77□□□□□ -1.65
CTNNBIP1Q9NSA3 SAMMSON-213ENST00000641336 1521 ntBASIC4.77□□□□□ -1.65
CTNNBIP1Q9NSA3 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CTNNBIP1Q9NSA3 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
CTNNBIP1Q9NSA3 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
CTNNBIP1Q9NSA3 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.77□□□□□ -1.65
CTNNBIP1Q9NSA3 KAT6B-201ENST00000287239 8287 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
CTNNBIP1Q9NSA3 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms