Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 OR52S1P-201ENST00000427016 937 ntBASIC7□□□□□ -1.29
SSU72Q9NP77 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC7□□□□□ -1.29
SSU72Q9NP77 AC074257.1-201ENST00000446340 585 ntTSL 4 BASIC7□□□□□ -1.29
SSU72Q9NP77 AL050341.1-201ENST00000447743 313 ntBASIC7□□□□□ -1.29
SSU72Q9NP77 RN7SL549P-201ENST00000478997 282 ntBASIC7□□□□□ -1.29
SSU72Q9NP77 CFLAR-223ENST00000479953 1230 ntTSL 2 BASIC7□□□□□ -1.29
SSU72Q9NP77 LINC02024-202ENST00000493545 483 ntTSL 3 BASIC7□□□□□ -1.29
SSU72Q9NP77 AC116353.2-201ENST00000505332 712 ntBASIC7□□□□□ -1.29
SSU72Q9NP77 AC113430.1-201ENST00000506872 718 ntBASIC7□□□□□ -1.29
SSU72Q9NP77 PGBD4P4-201ENST00000509673 613 ntBASIC7□□□□□ -1.29
SSU72Q9NP77 CDC42P4-201ENST00000510507 563 ntBASIC7□□□□□ -1.29
SSU72Q9NP77 HIGD1AP18-201ENST00000520730 278 ntBASIC7□□□□□ -1.29
SSU72Q9NP77 AC055860.1-201ENST00000525523 688 ntTSL 5 BASIC7□□□□□ -1.29
SSU72Q9NP77 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC7□□□□□ -1.29
SSU72Q9NP77 AC087241.3-201ENST00000542076 862 ntTSL 2 BASIC7□□□□□ -1.29
SSU72Q9NP77 AC005479.1-201ENST00000554629 451 ntBASIC7□□□□□ -1.29
SSU72Q9NP77 SPATA8-202ENST00000558553 406 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
SSU72Q9NP77 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC7□□□□□ -1.29
SSU72Q9NP77 LINC02178-201ENST00000566876 425 ntTSL 3 BASIC7□□□□□ -1.29
SSU72Q9NP77 ISCA1P3-201ENST00000577104 373 ntBASIC7□□□□□ -1.29
SSU72Q9NP77 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC7□□□□□ -1.29
SSU72Q9NP77 AC005495.1-201ENST00000586611 1211 ntBASIC7□□□□□ -1.29
SSU72Q9NP77 AL606834.2-201ENST00000602954 668 ntBASIC7□□□□□ -1.29
SSU72Q9NP77 SUMO2P14-201ENST00000604488 293 ntBASIC7□□□□□ -1.29
SSU72Q9NP77 AC126118.1-201ENST00000607744 628 ntBASIC7□□□□□ -1.29
SSU72Q9NP77 AL590560.2-201ENST00000608430 732 ntBASIC7□□□□□ -1.29
SSU72Q9NP77 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC7□□□□□ -1.29
SSU72Q9NP77 AL592148.2-201ENST00000612210 372 ntBASIC7□□□□□ -1.29
SSU72Q9NP77 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC7□□□□□ -1.29
SSU72Q9NP77 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC7□□□□□ -1.29
SSU72Q9NP77 RPGRIP1L-205ENST00000563746 4193 ntTSL 1 (best) BASIC7□□□□□ -1.29
SSU72Q9NP77 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC7□□□□□ -1.29
SSU72Q9NP77 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
SSU72Q9NP77 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC7□□□□□ -1.29
SSU72Q9NP77 DCP1B-205ENST00000540622 1547 ntTSL 5 BASIC7□□□□□ -1.29
SSU72Q9NP77 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SSU72Q9NP77 NCOR1-204ENST00000395851 7950 ntTSL 1 (best) BASIC7□□□□□ -1.29
SSU72Q9NP77 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC7□□□□□ -1.29
SSU72Q9NP77 PARP4P1-201ENST00000435945 2337 ntBASIC7□□□□□ -1.29
SSU72Q9NP77 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC7□□□□□ -1.29
SSU72Q9NP77 ECI2-204ENST00000380125 1405 ntTSL 1 (best) BASIC7□□□□□ -1.29
SSU72Q9NP77 TFDP2-222ENST00000495310 1442 ntAPPRIS ALT2 TSL 2 BASIC7□□□□□ -1.29
SSU72Q9NP77 PRLR-213ENST00000514088 1440 ntTSL 5 BASIC7□□□□□ -1.29
SSU72Q9NP77 TMBIM6-202ENST00000395006 2598 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
SSU72Q9NP77 AC007938.1-201ENST00000562524 2902 ntBASIC7□□□□□ -1.29
SSU72Q9NP77 PIK3CB-201ENST00000289153 5919 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
SSU72Q9NP77 AC099506.1-201ENST00000567359 4037 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SSU72Q9NP77 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.99□□□□□ -1.29
SSU72Q9NP77 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC6.99□□□□□ -1.29
SSU72Q9NP77 AL603750.1-201ENST00000624216 1717 ntBASIC6.99□□□□□ -1.29
SSU72Q9NP77 AC093844.1-201ENST00000514910 1361 ntBASIC6.99□□□□□ -1.29
SSU72Q9NP77 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SSU72Q9NP77 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.29
SSU72Q9NP77 CFAP57-208ENST00000610710 4162 ntTSL 5 BASIC6.99□□□□□ -1.29
SSU72Q9NP77 BRWD1-203ENST00000342449 12929 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SSU72Q9NP77 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SSU72Q9NP77 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SSU72Q9NP77 OR56B2P-201ENST00000317102 954 ntBASIC6.99□□□□□ -1.29
SSU72Q9NP77 IL37-203ENST00000349806 589 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SSU72Q9NP77 RPL39-201ENST00000361575 401 ntAPPRIS P1 TSL 1 (best) BASIC6.99□□□□□ -1.29
SSU72Q9NP77 RN7SKP211-201ENST00000363328 315 ntBASIC6.99□□□□□ -1.29
SSU72Q9NP77 RNA5SP260-201ENST00000363849 111 ntBASIC6.99□□□□□ -1.29
SSU72Q9NP77 Y_RNA.359-201ENST00000365498 102 ntBASIC6.99□□□□□ -1.29
SSU72Q9NP77 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.99□□□□□ -1.29
SSU72Q9NP77 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.99□□□□□ -1.29
SSU72Q9NP77 Y_RNA.465-201ENST00000384293 102 ntBASIC6.99□□□□□ -1.29
SSU72Q9NP77 IGHV4-34-201ENST00000390616 400 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
SSU72Q9NP77 CHMP1B2P-201ENST00000399581 597 ntBASIC6.99□□□□□ -1.29
SSU72Q9NP77 SRSF7-202ENST00000409276 1050 ntTSL 5 BASIC6.99□□□□□ -1.29
SSU72Q9NP77 RN7SKP254-201ENST00000410685 310 ntBASIC6.99□□□□□ -1.29
SSU72Q9NP77 RNU6-920P-201ENST00000410926 92 ntBASIC6.99□□□□□ -1.29
SSU72Q9NP77 MKX-AS1-201ENST00000412244 745 ntTSL 3 BASIC6.99□□□□□ -1.29
SSU72Q9NP77 PGBD4P8-201ENST00000412993 562 ntBASIC6.99□□□□□ -1.29
SSU72Q9NP77 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC6.99□□□□□ -1.29
SSU72Q9NP77 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SSU72Q9NP77 FTOP1-201ENST00000419363 861 ntBASIC6.99□□□□□ -1.29
SSU72Q9NP77 AKR1B15-201ENST00000423958 1035 ntAPPRIS P1 TSL 5 BASIC6.99□□□□□ -1.29
SSU72Q9NP77 TRBV10-2-201ENST00000426318 395 ntAPPRIS P1 BASIC6.99□□□□□ -1.29
SSU72Q9NP77 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC6.99□□□□□ -1.29
SSU72Q9NP77 MTCYBP34-201ENST00000439552 670 ntBASIC6.99□□□□□ -1.29
SSU72Q9NP77 RNF216-IT1-201ENST00000443837 337 ntTSL 5 BASIC6.99□□□□□ -1.29
SSU72Q9NP77 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC6.99□□□□□ -1.29
SSU72Q9NP77 AL512380.1-202ENST00000447728 543 ntTSL 5 BASIC6.99□□□□□ -1.29
SSU72Q9NP77 TUBB4BP2-201ENST00000454125 798 ntBASIC6.99□□□□□ -1.29
SSU72Q9NP77 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC6.99□□□□□ -1.29
SSU72Q9NP77 AC008040.4-201ENST00000494834 768 ntBASIC6.99□□□□□ -1.29
SSU72Q9NP77 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC6.99□□□□□ -1.29
SSU72Q9NP77 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC6.99□□□□□ -1.29
SSU72Q9NP77 AC010230.1-202ENST00000506265 592 ntTSL 5 BASIC6.99□□□□□ -1.29
SSU72Q9NP77 AC109464.2-201ENST00000510242 943 ntBASIC6.99□□□□□ -1.29
SSU72Q9NP77 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC6.99□□□□□ -1.29
SSU72Q9NP77 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.99□□□□□ -1.29
SSU72Q9NP77 CHCHD7-205ENST00000517933 580 ntAPPRIS P1 TSL 4 BASIC6.99□□□□□ -1.29
SSU72Q9NP77 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC6.99□□□□□ -1.29
SSU72Q9NP77 AC099520.2-201ENST00000523745 567 ntTSL 3 BASIC6.99□□□□□ -1.29
SSU72Q9NP77 OR4R3P-201ENST00000525084 838 ntBASIC6.99□□□□□ -1.29
SSU72Q9NP77 AP000873.5-201ENST00000533906 236 ntBASIC6.99□□□□□ -1.29
SSU72Q9NP77 AC016957.1-201ENST00000534895 309 ntBASIC6.99□□□□□ -1.29
SSU72Q9NP77 DDIT3-204ENST00000551116 1067 ntTSL 1 (best) BASIC6.99□□□□□ -1.29
SSU72Q9NP77 HNRNPCP1-201ENST00000556181 766 ntBASIC6.99□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms