Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 RPS12P17-201ENST00000438591 377 ntBASIC5.66□□□□□ -1.5
LRTM1Q9HBL6 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC5.66□□□□□ -1.5
LRTM1Q9HBL6 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC5.66□□□□□ -1.5
LRTM1Q9HBL6 RPL12P39-201ENST00000455456 496 ntBASIC5.66□□□□□ -1.5
LRTM1Q9HBL6 AC023245.1-201ENST00000468501 517 ntBASIC5.66□□□□□ -1.5
LRTM1Q9HBL6 AC091874.2-201ENST00000505889 720 ntBASIC5.66□□□□□ -1.5
LRTM1Q9HBL6 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC5.66□□□□□ -1.5
LRTM1Q9HBL6 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.66□□□□□ -1.5
LRTM1Q9HBL6 RNA5SP441-201ENST00000516809 88 ntBASIC5.66□□□□□ -1.5
LRTM1Q9HBL6 FAU-203ENST00000525297 355 ntTSL 5 BASIC5.66□□□□□ -1.5
LRTM1Q9HBL6 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.66□□□□□ -1.5
LRTM1Q9HBL6 COPZ1-205ENST00000548753 778 ntTSL 3 BASIC5.66□□□□□ -1.5
LRTM1Q9HBL6 AC126615.2-201ENST00000553003 515 ntBASIC5.66□□□□□ -1.5
LRTM1Q9HBL6 AL355838.1-201ENST00000554814 559 ntTSL 4 BASIC5.66□□□□□ -1.5
LRTM1Q9HBL6 AC093524.1-201ENST00000564266 1094 ntBASIC5.66□□□□□ -1.5
LRTM1Q9HBL6 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.66□□□□□ -1.5
LRTM1Q9HBL6 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.66□□□□□ -1.5
LRTM1Q9HBL6 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.66□□□□□ -1.5
LRTM1Q9HBL6 FAM27E2-201ENST00000619668 403 ntBASIC5.66□□□□□ -1.5
LRTM1Q9HBL6 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC5.66□□□□□ -1.5
LRTM1Q9HBL6 AC073488.3-201ENST00000631611 778 ntBASIC5.66□□□□□ -1.5
LRTM1Q9HBL6 AC073488.6-201ENST00000632293 754 ntBASIC5.66□□□□□ -1.5
LRTM1Q9HBL6 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LRTM1Q9HBL6 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LRTM1Q9HBL6 LINC01684-203ENST00000453784 2908 ntTSL 2 BASIC5.66□□□□□ -1.5
LRTM1Q9HBL6 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
LRTM1Q9HBL6 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LRTM1Q9HBL6 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LRTM1Q9HBL6 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LRTM1Q9HBL6 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LRTM1Q9HBL6 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.66□□□□□ -1.5
LRTM1Q9HBL6 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.66□□□□□ -1.5
LRTM1Q9HBL6 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 RBPJP7-201ENST00000442803 1447 ntBASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 RBPJP5-201ENST00000449433 1447 ntBASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 AC012254.3-201ENST00000591183 2117 ntBASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 QRSL1P1-201ENST00000400977 1540 ntBASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 RNA5SP433-201ENST00000364491 114 ntBASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 KATNBL1P2-201ENST00000433311 835 ntBASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 AL035443.1-202ENST00000442841 586 ntTSL 2 BASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 AL445466.1-201ENST00000448432 357 ntBASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 AC006539.1-201ENST00000481419 501 ntBASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 AC106822.1-201ENST00000502647 526 ntBASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 AC104779.1-201ENST00000503557 441 ntTSL 3 BASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 AC018797.1-201ENST00000510791 255 ntBASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 AC136777.2-201ENST00000522979 358 ntBASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 AC084121.1-201ENST00000533882 835 ntBASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 AC002519.2-203ENST00000567043 837 ntBASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 AC002310.3-201ENST00000569728 723 ntBASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 GARSP1-201ENST00000570895 719 ntBASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 AC004034.1-201ENST00000573260 510 ntTSL 3 BASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 TXNP4-201ENST00000575018 310 ntBASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 AC025857.2-201ENST00000602711 238 ntBASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 AL021918.2-201ENST00000613415 194 ntBASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 AL357140.4-201ENST00000636827 412 ntBASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LRTM1Q9HBL6 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
LRTM1Q9HBL6 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC5.65□□□□□ -1.51
LRTM1Q9HBL6 AC004076.2-201ENST00000620532 3323 ntBASIC5.65□□□□□ -1.51
LRTM1Q9HBL6 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
LRTM1Q9HBL6 AC025470.1-201ENST00000510053 2032 ntBASIC5.65□□□□□ -1.51
LRTM1Q9HBL6 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
LRTM1Q9HBL6 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC5.65□□□□□ -1.51
LRTM1Q9HBL6 PAK3-201ENST00000262836 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.51
LRTM1Q9HBL6 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC5.65□□□□□ -1.51
LRTM1Q9HBL6 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC5.64□□□□□ -1.51
LRTM1Q9HBL6 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
LRTM1Q9HBL6 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.64□□□□□ -1.51
LRTM1Q9HBL6 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
LRTM1Q9HBL6 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LRTM1Q9HBL6 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LRTM1Q9HBL6 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LRTM1Q9HBL6 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.64□□□□□ -1.51
LRTM1Q9HBL6 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.64□□□□□ -1.51
LRTM1Q9HBL6 PMCHL2-202ENST00000450213 1917 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LRTM1Q9HBL6 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LRTM1Q9HBL6 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms