Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 LRRC49-204ENST00000544974 6605 ntTSL 2 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 SPAG9-209ENST00000510283 4949 ntTSL 2 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 LINC02092-201ENST00000455366 2472 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 RTN4-205ENST00000394609 1898 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 DDX18-201ENST00000263239 3796 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 DPYD-202ENST00000370192 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 CLEC4A-202ENST00000345999 841 ntTSL 5 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 RNU5B-1-201ENST00000363286 116 ntBASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 RN7SKP47-201ENST00000365347 328 ntBASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 RNU6-1005P-201ENST00000384519 107 ntBASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 TAF9BP2-201ENST00000400856 499 ntBASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 AL359715.1-201ENST00000404330 555 ntBASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 AL021407.1-201ENST00000404531 386 ntBASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 LINC01881-201ENST00000416103 412 ntBASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 CHCHD3P1-201ENST00000425516 676 ntBASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 AC007403.1-201ENST00000427579 567 ntTSL 4 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 EEF1A1P39-201ENST00000440791 250 ntBASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 TPTE2P6-202ENST00000445572 1007 ntBASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 AC068135.1-201ENST00000446164 246 ntBASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 MYO5BP2-201ENST00000449815 1277 ntBASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 SLAMF6P1-201ENST00000451067 602 ntBASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 SKINT1L-203ENST00000453388 749 ntTSL 5 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 AL391422.2-202ENST00000454396 347 ntTSL 5 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 OR7E7P-201ENST00000455678 1012 ntBASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 RN7SL259P-201ENST00000478499 253 ntBASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 RPL7L1P7-201ENST00000509986 724 ntBASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 CFI-204ENST00000510800 667 ntTSL 2 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 AC017007.1-201ENST00000511960 415 ntBASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 AC110775.1-201ENST00000513721 462 ntBASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 RFESD-208ENST00000513950 464 ntTSL 5 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 FABP5P12-201ENST00000515543 389 ntBASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 RNU6-1028P-201ENST00000517164 93 ntBASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 NPM1P52-201ENST00000518264 846 ntBASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 AC087360.1-201ENST00000518788 616 ntBASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 AC022639.1-204ENST00000520365 569 ntTSL 4 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 IGLVV-66-201ENST00000523818 341 ntBASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 AC016144.1-201ENST00000548175 1087 ntBASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 AC126323.4-201ENST00000566935 234 ntBASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 AC091932.1-201ENST00000569381 427 ntBASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 AC010546.1-201ENST00000569391 485 ntBASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 AC110603.1-201ENST00000580645 468 ntTSL 3 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 ZNF675-204ENST00000599168 592 ntTSL 2 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 QTRT1P1-201ENST00000604344 1078 ntBASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 AL078624.2-201ENST00000605063 554 ntBASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 AC124312.4-201ENST00000605533 310 ntBASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 AL133243.1-201ENST00000614487 366 ntBASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 AL158163.2-201ENST00000619110 700 ntBASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 OR5D13-201ENST00000623930 945 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 AC008626.2-201ENST00000624425 248 ntBASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 AC010608.2-201ENST00000624830 470 ntBASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 SAMMSON-214ENST00000641395 1264 ntBASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 CFAP61-201ENST00000245957 4082 ntAPPRIS P2 TSL 1 (best) BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 LRRC7-203ENST00000370958 2375 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 AC126323.2-201ENST00000559985 2369 ntTSL 5 BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 FRMD3-207ENST00000621208 5064 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SEC61A2Q9H9S3 AC007114.2-201ENST00000576014 4281 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 WDR93-204ENST00000558000 1886 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 AC112243.1-201ENST00000623949 3851 ntBASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 AC007402.1-201ENST00000440698 3939 ntTSL 2 BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 MEPE-201ENST00000361056 1986 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 OR56B1-201ENST00000317121 2075 ntAPPRIS P1 BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 KCNMB2-201ENST00000358316 2271 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
SEC61A2Q9H9S3 CA10-204ENST00000570565 2276 ntTSL 5 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms