Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC6.35□□□□□ -1.39
NXF3Q9H4D5 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.35□□□□□ -1.39
NXF3Q9H4D5 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
NXF3Q9H4D5 METTL5-204ENST00000409340 472 ntTSL 5 BASIC6.35□□□□□ -1.39
NXF3Q9H4D5 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC6.35□□□□□ -1.39
NXF3Q9H4D5 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.35□□□□□ -1.39
NXF3Q9H4D5 AC092811.1-202ENST00000433058 656 ntTSL 2 BASIC6.35□□□□□ -1.39
NXF3Q9H4D5 AC004870.2-201ENST00000445615 831 ntTSL 3 BASIC6.35□□□□□ -1.39
NXF3Q9H4D5 AL603882.1-201ENST00000463059 681 ntBASIC6.35□□□□□ -1.39
NXF3Q9H4D5 AL035690.1-201ENST00000490892 383 ntBASIC6.35□□□□□ -1.39
NXF3Q9H4D5 RN7SL284P-201ENST00000498823 275 ntBASIC6.35□□□□□ -1.39
NXF3Q9H4D5 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC6.35□□□□□ -1.39
NXF3Q9H4D5 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.35□□□□□ -1.39
NXF3Q9H4D5 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NXF3Q9H4D5 AC079015.1-201ENST00000521793 596 ntTSL 2 BASIC6.35□□□□□ -1.39
NXF3Q9H4D5 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.35□□□□□ -1.39
NXF3Q9H4D5 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.35□□□□□ -1.39
NXF3Q9H4D5 C15orf41-204ENST00000562877 764 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NXF3Q9H4D5 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC6.35□□□□□ -1.39
NXF3Q9H4D5 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.35□□□□□ -1.39
NXF3Q9H4D5 AL137789.1-204ENST00000623503 666 ntTSL 5 BASIC6.35□□□□□ -1.39
NXF3Q9H4D5 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
NXF3Q9H4D5 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.35□□□□□ -1.39
NXF3Q9H4D5 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NXF3Q9H4D5 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.35□□□□□ -1.39
NXF3Q9H4D5 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
NXF3Q9H4D5 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NXF3Q9H4D5 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.35□□□□□ -1.39
NXF3Q9H4D5 MTCO1P11-201ENST00000429111 1528 ntBASIC6.35□□□□□ -1.39
NXF3Q9H4D5 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
NXF3Q9H4D5 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
NXF3Q9H4D5 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NXF3Q9H4D5 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.34□□□□□ -1.39
NXF3Q9H4D5 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
NXF3Q9H4D5 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.34□□□□□ -1.39
NXF3Q9H4D5 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.34□□□□□ -1.39
NXF3Q9H4D5 RPS2P45-201ENST00000469997 2057 ntBASIC6.34□□□□□ -1.39
NXF3Q9H4D5 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.34□□□□□ -1.39
NXF3Q9H4D5 OR2G3-201ENST00000320002 930 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
NXF3Q9H4D5 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC6.34□□□□□ -1.39
NXF3Q9H4D5 U3.25-201ENST00000391209 220 ntBASIC6.34□□□□□ -1.39
NXF3Q9H4D5 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.34□□□□□ -1.39
NXF3Q9H4D5 RN7SKP229-201ENST00000410465 302 ntBASIC6.34□□□□□ -1.39
NXF3Q9H4D5 AL357752.1-201ENST00000412817 349 ntBASIC6.34□□□□□ -1.39
NXF3Q9H4D5 RPS21P8-201ENST00000413365 247 ntBASIC6.34□□□□□ -1.39
NXF3Q9H4D5 SDHDP6-201ENST00000414693 480 ntBASIC6.34□□□□□ -1.39
NXF3Q9H4D5 AL513325.1-201ENST00000417716 1034 ntBASIC6.34□□□□□ -1.39
NXF3Q9H4D5 AL662874.1-201ENST00000426065 230 ntBASIC6.34□□□□□ -1.39
NXF3Q9H4D5 DEFA9P-201ENST00000433042 285 ntBASIC6.34□□□□□ -1.39
NXF3Q9H4D5 HMGB3P24-201ENST00000433260 622 ntBASIC6.34□□□□□ -1.39
NXF3Q9H4D5 AC023141.8-201ENST00000442554 208 ntBASIC6.34□□□□□ -1.39
NXF3Q9H4D5 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC6.34□□□□□ -1.39
NXF3Q9H4D5 RPS27AP2-201ENST00000457576 465 ntBASIC6.34□□□□□ -1.39
NXF3Q9H4D5 RPSAP39-201ENST00000467439 883 ntBASIC6.34□□□□□ -1.39
NXF3Q9H4D5 RPS17P15-201ENST00000475609 349 ntBASIC6.34□□□□□ -1.39
NXF3Q9H4D5 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.34□□□□□ -1.39
NXF3Q9H4D5 AC011389.1-203ENST00000513790 573 ntTSL 4 BASIC6.34□□□□□ -1.39
NXF3Q9H4D5 TMEM97P2-201ENST00000517841 403 ntBASIC6.34□□□□□ -1.39
NXF3Q9H4D5 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.34□□□□□ -1.39
NXF3Q9H4D5 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.34□□□□□ -1.39
NXF3Q9H4D5 DPPA2P4-201ENST00000563717 878 ntBASIC6.34□□□□□ -1.39
NXF3Q9H4D5 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.34□□□□□ -1.39
NXF3Q9H4D5 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC6.34□□□□□ -1.39
NXF3Q9H4D5 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC6.34□□□□□ -1.39
NXF3Q9H4D5 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.34□□□□□ -1.39
NXF3Q9H4D5 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.34□□□□□ -1.39
NXF3Q9H4D5 MIR6768-201ENST00000610734 72 ntBASIC6.34□□□□□ -1.39
NXF3Q9H4D5 AL445670.1-201ENST00000618889 801 ntBASIC6.34□□□□□ -1.39
NXF3Q9H4D5 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
NXF3Q9H4D5 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.34□□□□□ -1.39
NXF3Q9H4D5 ZNF658B-201ENST00000602828 3408 ntBASIC6.34□□□□□ -1.39
NXF3Q9H4D5 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.34□□□□□ -1.39
NXF3Q9H4D5 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC6.34□□□□□ -1.39
NXF3Q9H4D5 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
NXF3Q9H4D5 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.39
NXF3Q9H4D5 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.4
NXF3Q9H4D5 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
NXF3Q9H4D5 FAM240A-201ENST00000444264 1826 ntAPPRIS P2 TSL 2 BASIC6.34□□□□□ -1.4
NXF3Q9H4D5 FAM240A-202ENST00000640551 1826 ntAPPRIS ALT2 TSL 2 BASIC6.34□□□□□ -1.4
NXF3Q9H4D5 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC6.34□□□□□ -1.4
NXF3Q9H4D5 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
NXF3Q9H4D5 NUMB-201ENST00000355058 3342 ntAPPRIS ALT1 TSL 5 BASIC6.33□□□□□ -1.4
NXF3Q9H4D5 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6.33□□□□□ -1.4
NXF3Q9H4D5 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
NXF3Q9H4D5 ZNF528-203ENST00000391788 4209 ntTSL 2 BASIC6.33□□□□□ -1.4
NXF3Q9H4D5 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.33□□□□□ -1.4
NXF3Q9H4D5 SSH1-202ENST00000326495 13040 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
NXF3Q9H4D5 SNORA64.1-201ENST00000362600 132 ntBASIC6.33□□□□□ -1.4
NXF3Q9H4D5 AC005522.1-201ENST00000395416 346 ntBASIC6.33□□□□□ -1.4
NXF3Q9H4D5 AL360271.1-201ENST00000395679 510 ntBASIC6.33□□□□□ -1.4
NXF3Q9H4D5 RPL34P3-201ENST00000421454 338 ntBASIC6.33□□□□□ -1.4
NXF3Q9H4D5 AC242426.1-201ENST00000435270 960 ntBASIC6.33□□□□□ -1.4
NXF3Q9H4D5 AC022215.1-201ENST00000481770 362 ntBASIC6.33□□□□□ -1.4
NXF3Q9H4D5 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.33□□□□□ -1.4
NXF3Q9H4D5 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.33□□□□□ -1.4
NXF3Q9H4D5 RNA5SP362-201ENST00000516048 118 ntBASIC6.33□□□□□ -1.4
NXF3Q9H4D5 AC244502.2-201ENST00000543361 851 ntBASIC6.33□□□□□ -1.4
NXF3Q9H4D5 TNFSF11-205ENST00000544862 818 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
NXF3Q9H4D5 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC6.33□□□□□ -1.4
NXF3Q9H4D5 AP000894.4-201ENST00000610185 483 ntBASIC6.33□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms