Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
IFT140Q96RY7 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
IFT140Q96RY7 GTDC1-201ENST00000241391 2356 ntTSL 2 BASIC9.44□□□□□ -0.9
IFT140Q96RY7 FOXJ3-203ENST00000372571 4468 ntTSL 2 BASIC9.44□□□□□ -0.9
IFT140Q96RY7 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC9.44□□□□□ -0.9
IFT140Q96RY7 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC9.44□□□□□ -0.9
IFT140Q96RY7 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC9.44□□□□□ -0.9
IFT140Q96RY7 MAPK10-338ENST00000641647 3362 ntBASIC9.44□□□□□ -0.9
IFT140Q96RY7 RNU1-43P-201ENST00000365052 165 ntBASIC9.44□□□□□ -0.9
IFT140Q96RY7 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
IFT140Q96RY7 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
IFT140Q96RY7 LINC02257-201ENST00000412445 605 ntTSL 2 BASIC9.44□□□□□ -0.9
IFT140Q96RY7 RPS6P23-201ENST00000413224 722 ntBASIC9.44□□□□□ -0.9
IFT140Q96RY7 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
IFT140Q96RY7 AK3P5-201ENST00000432033 519 ntBASIC9.44□□□□□ -0.9
IFT140Q96RY7 AC009963.2-201ENST00000453431 138 ntBASIC9.44□□□□□ -0.9
IFT140Q96RY7 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC9.44□□□□□ -0.9
IFT140Q96RY7 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC9.44□□□□□ -0.9
IFT140Q96RY7 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC9.44□□□□□ -0.9
IFT140Q96RY7 MIR5095-201ENST00000578844 88 ntBASIC9.44□□□□□ -0.9
IFT140Q96RY7 AC008745.1-201ENST00000604064 271 ntBASIC9.44□□□□□ -0.9
IFT140Q96RY7 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
IFT140Q96RY7 AL353662.3-201ENST00000625131 237 ntBASIC9.44□□□□□ -0.9
IFT140Q96RY7 DIO2-201ENST00000422005 6272 ntTSL 5 BASIC9.44□□□□□ -0.9
IFT140Q96RY7 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
IFT140Q96RY7 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC9.44□□□□□ -0.9
IFT140Q96RY7 NKRF-204ENST00000542113 3351 ntTSL 3 BASIC9.44□□□□□ -0.9
IFT140Q96RY7 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
IFT140Q96RY7 SLFN13-204ENST00000526861 6004 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
IFT140Q96RY7 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
IFT140Q96RY7 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC9.43□□□□□ -0.9
IFT140Q96RY7 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC9.43□□□□□ -0.9
IFT140Q96RY7 PARP4P1-201ENST00000435945 2337 ntBASIC9.43□□□□□ -0.9
IFT140Q96RY7 ENAH-204ENST00000366844 13168 ntAPPRIS P4 TSL 1 (best) BASIC9.43□□□□□ -0.9
IFT140Q96RY7 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
IFT140Q96RY7 AL136531.3-201ENST00000624378 3658 ntBASIC9.43□□□□□ -0.9
IFT140Q96RY7 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC9.43□□□□□ -0.9
IFT140Q96RY7 IL3-201ENST00000296870 1050 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
IFT140Q96RY7 GNAS-202ENST00000306090 477 ntTSL 5 BASIC9.43□□□□□ -0.9
IFT140Q96RY7 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
IFT140Q96RY7 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC9.43□□□□□ -0.9
IFT140Q96RY7 FAM96AP1-201ENST00000430879 482 ntBASIC9.43□□□□□ -0.9
IFT140Q96RY7 AL138878.2-201ENST00000440581 1241 ntBASIC9.43□□□□□ -0.9
IFT140Q96RY7 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC9.43□□□□□ -0.9
IFT140Q96RY7 MAL2-207ENST00000522828 603 ntTSL 3 BASIC9.43□□□□□ -0.9
IFT140Q96RY7 OR4A40P-201ENST00000533878 948 ntBASIC9.43□□□□□ -0.9
IFT140Q96RY7 CDC42EP3P1-201ENST00000601004 764 ntBASIC9.43□□□□□ -0.9
IFT140Q96RY7 AC005084.1-201ENST00000605160 304 ntBASIC9.43□□□□□ -0.9
IFT140Q96RY7 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC9.43□□□□□ -0.9
IFT140Q96RY7 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC9.43□□□□□ -0.9
IFT140Q96RY7 AC090607.5-201ENST00000615692 224 ntBASIC9.43□□□□□ -0.9
IFT140Q96RY7 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC9.43□□□□□ -0.9
IFT140Q96RY7 YOD1-202ENST00000367084 6291 ntTSL 2 BASIC9.43□□□□□ -0.9
IFT140Q96RY7 AL356317.1-201ENST00000396110 1436 ntBASIC9.43□□□□□ -0.9
IFT140Q96RY7 C14orf166-201ENST00000261700 7075 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
IFT140Q96RY7 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
IFT140Q96RY7 THAP6-201ENST00000311638 3549 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
IFT140Q96RY7 AL591848.4-201ENST00000567832 3472 ntBASIC9.43□□□□□ -0.9
IFT140Q96RY7 FGFR2-205ENST00000357555 3690 ntTSL 2 BASIC9.43□□□□□ -0.9
IFT140Q96RY7 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC9.43□□□□□ -0.9
IFT140Q96RY7 CTAGE11P-201ENST00000451540 2353 ntBASIC9.42□□□□□ -0.9
IFT140Q96RY7 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC9.42□□□□□ -0.9
IFT140Q96RY7 DLC1-201ENST00000276297 7447 ntAPPRIS P4 TSL 1 (best) BASIC9.42□□□□□ -0.9
IFT140Q96RY7 SNORA17.1-201ENST00000362945 126 ntBASIC9.42□□□□□ -0.9
IFT140Q96RY7 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC9.42□□□□□ -0.9
IFT140Q96RY7 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC9.42□□□□□ -0.9
IFT140Q96RY7 AC073648.4-201ENST00000442655 781 ntBASIC9.42□□□□□ -0.9
IFT140Q96RY7 AC105399.1-202ENST00000447303 205 ntBASIC9.42□□□□□ -0.9
IFT140Q96RY7 AL162739.1-201ENST00000450606 307 ntBASIC9.42□□□□□ -0.9
IFT140Q96RY7 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC9.42□□□□□ -0.9
IFT140Q96RY7 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC9.42□□□□□ -0.9
IFT140Q96RY7 AC096741.1-201ENST00000472250 846 ntBASIC9.42□□□□□ -0.9
IFT140Q96RY7 LINC00518-204ENST00000491317 1228 ntTSL 2 BASIC9.42□□□□□ -0.9
IFT140Q96RY7 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC9.42□□□□□ -0.9
IFT140Q96RY7 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC9.42□□□□□ -0.9
IFT140Q96RY7 AC105384.2-201ENST00000508433 640 ntBASIC9.42□□□□□ -0.9
IFT140Q96RY7 MOCS2-205ENST00000508922 1210 ntTSL 5 BASIC9.42□□□□□ -0.9
IFT140Q96RY7 RAB9BP1-201ENST00000519581 626 ntBASIC9.42□□□□□ -0.9
IFT140Q96RY7 AC092490.3-201ENST00000545370 572 ntBASIC9.42□□□□□ -0.9
IFT140Q96RY7 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC9.42□□□□□ -0.9
IFT140Q96RY7 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC9.42□□□□□ -0.9
IFT140Q96RY7 CSNK1A1-210ENST00000606719 835 ntTSL 2 BASIC9.42□□□□□ -0.9
IFT140Q96RY7 AC109583.2-201ENST00000617367 129 ntBASIC9.42□□□□□ -0.9
IFT140Q96RY7 ATF7IP2-203ENST00000396559 3641 ntTSL 2 BASIC9.42□□□□□ -0.9
IFT140Q96RY7 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
IFT140Q96RY7 CD2-202ENST00000369478 1609 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
IFT140Q96RY7 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
IFT140Q96RY7 AKAP13-203ENST00000394518 13215 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
IFT140Q96RY7 APP-206ENST00000359726 3294 ntTSL 2 BASIC9.42□□□□□ -0.9
IFT140Q96RY7 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC9.42□□□□□ -0.9
IFT140Q96RY7 HP1BP3-203ENST00000375003 4822 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
IFT140Q96RY7 ZFP37-201ENST00000374227 6266 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
IFT140Q96RY7 MALAT1-202ENST00000534336 8708 ntBASIC9.42□□□□□ -0.9
IFT140Q96RY7 AC130304.1-201ENST00000622942 2385 ntBASIC9.42□□□□□ -0.9
IFT140Q96RY7 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
IFT140Q96RY7 TDP1-201ENST00000335725 3702 ntAPPRIS P1 TSL 1 (best) BASIC9.41□□□□□ -0.9
IFT140Q96RY7 USP9YP9-201ENST00000429406 715 ntBASIC9.41□□□□□ -0.9
IFT140Q96RY7 AL356981.1-201ENST00000454879 684 ntBASIC9.41□□□□□ -0.9
IFT140Q96RY7 ACA64.4-201ENST00000459070 127 ntBASIC9.41□□□□□ -0.9
IFT140Q96RY7 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC9.41□□□□□ -0.9
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms