Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 AC092865.4-201ENST00000477936 615 ntBASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 AC113367.2-201ENST00000505749 160 ntBASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 AC093815.1-201ENST00000508637 280 ntBASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 MAST4-IT1-201ENST00000514241 658 ntBASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 AC084125.1-201ENST00000525461 429 ntTSL 3 BASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 GMDS-AS1-212ENST00000534160 720 ntTSL 3 BASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 AC092332.1-201ENST00000563684 829 ntBASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 AC100821.2-201ENST00000565668 440 ntTSL 2 BASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 AL031658.2-201ENST00000616850 651 ntBASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 FAM27E2-201ENST00000619668 403 ntBASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 SNX18P12-201ENST00000624821 759 ntBASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 AC073488.3-201ENST00000631611 778 ntBASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 DYNC2LI1-201ENST00000260605 1399 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 RBPJP7-201ENST00000442803 1447 ntBASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 RBPJP5-201ENST00000449433 1447 ntBASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 CHN1-201ENST00000295497 2047 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 LINC00320-204ENST00000437238 2004 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 SLAIN1-201ENST00000267219 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.87□□□□□ -1.47
PDLIM5Q96HC4 AC018628.1-201ENST00000624147 3819 ntBASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 AL391704.1-201ENST00000422206 2368 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 AL161756.3-201ENST00000641216 2071 ntBASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 HSPD1P9-201ENST00000420325 1636 ntBASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 SAMMSON-210ENST00000641260 1308 ntBASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 RBBP4P5-201ENST00000398583 1266 ntBASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 RN7SKP86-201ENST00000410454 332 ntBASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 AL445213.1-201ENST00000412589 747 ntBASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 SEPT7P8-201ENST00000413308 775 ntBASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 RAB9AP4-201ENST00000415230 609 ntBASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 AL359885.1-201ENST00000415786 903 ntBASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 AC099677.3-201ENST00000427081 395 ntBASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 AC023141.3-201ENST00000436698 278 ntBASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 AC019084.1-201ENST00000457337 432 ntBASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 AL603882.1-201ENST00000463059 681 ntBASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 AC023245.1-201ENST00000468501 517 ntBASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 RNA5SP441-201ENST00000516809 88 ntBASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 AP002981.1-201ENST00000517692 975 ntBASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 LGALS8-217ENST00000525042 903 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 AL121594.2-201ENST00000541658 472 ntBASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 AL139022.1-201ENST00000556127 486 ntTSL 5 BASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 AL121839.1-201ENST00000556233 1185 ntBASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 AC011270.1-201ENST00000558606 583 ntBASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 AC084782.2-201ENST00000561934 839 ntTSL 3 BASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 OR1E3-201ENST00000575608 948 ntBASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 AC243967.1-201ENST00000598976 578 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 AC111152.1-202ENST00000635848 339 ntBASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
PDLIM5Q96HC4 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 PMFBP1-207ENST00000537465 3935 ntAPPRIS ALT2 TSL 2 BASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 MEF2C-202ENST00000424173 6336 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 RNU11-201ENST00000387069 134 ntBASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 AL354956.1-201ENST00000424487 467 ntTSL 5 BASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 GNGT1-204ENST00000430875 628 ntTSL 2 BASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 RPS7P3-201ENST00000443360 580 ntBASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 AL445466.1-201ENST00000448432 357 ntBASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 AC112484.3-201ENST00000505910 329 ntBASIC5.85□□□□□ -1.47
PDLIM5Q96HC4 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms