Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
RFT1Q96AA3 AC003991.1-210ENST00000434733 1048 ntTSL 3 BASIC5.36□□□□□ -1.55
RFT1Q96AA3 RPS19P6-201ENST00000441327 433 ntBASIC5.36□□□□□ -1.55
RFT1Q96AA3 COX4I1P2-201ENST00000447446 547 ntBASIC5.36□□□□□ -1.55
RFT1Q96AA3 MTND6P5-201ENST00000448266 512 ntBASIC5.36□□□□□ -1.55
RFT1Q96AA3 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC5.36□□□□□ -1.55
RFT1Q96AA3 RAB28P2-201ENST00000454299 641 ntBASIC5.36□□□□□ -1.55
RFT1Q96AA3 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RFT1Q96AA3 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC5.36□□□□□ -1.55
RFT1Q96AA3 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC5.36□□□□□ -1.55
RFT1Q96AA3 RFPL4AP3-201ENST00000515267 345 ntBASIC5.36□□□□□ -1.55
RFT1Q96AA3 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC5.36□□□□□ -1.55
RFT1Q96AA3 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC5.36□□□□□ -1.55
RFT1Q96AA3 AL355112.1-201ENST00000550309 1236 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RFT1Q96AA3 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RFT1Q96AA3 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.36□□□□□ -1.55
RFT1Q96AA3 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.36□□□□□ -1.55
RFT1Q96AA3 AC060780.2-201ENST00000589047 198 ntBASIC5.36□□□□□ -1.55
RFT1Q96AA3 AC020916.2-201ENST00000591242 360 ntBASIC5.36□□□□□ -1.55
RFT1Q96AA3 RPL7AP69-201ENST00000595306 806 ntBASIC5.36□□□□□ -1.55
RFT1Q96AA3 AL078624.2-201ENST00000605063 554 ntBASIC5.36□□□□□ -1.55
RFT1Q96AA3 AL390877.1-201ENST00000605704 214 ntBASIC5.36□□□□□ -1.55
RFT1Q96AA3 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC5.36□□□□□ -1.55
RFT1Q96AA3 AC010998.3-201ENST00000613871 631 ntBASIC5.36□□□□□ -1.55
RFT1Q96AA3 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC5.36□□□□□ -1.55
RFT1Q96AA3 MALAT1-209ENST00000616691 587 ntTSL 2 BASIC5.36□□□□□ -1.55
RFT1Q96AA3 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
RFT1Q96AA3 AL049541.1-201ENST00000630976 642 ntTSL 2 BASIC5.36□□□□□ -1.55
RFT1Q96AA3 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
RFT1Q96AA3 AC092111.2-201ENST00000611627 1414 ntBASIC5.36□□□□□ -1.55
RFT1Q96AA3 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
RFT1Q96AA3 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.36□□□□□ -1.55
RFT1Q96AA3 TCF4-281ENST00000636822 7640 ntTSL 5 BASIC5.36□□□□□ -1.55
RFT1Q96AA3 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RFT1Q96AA3 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
RFT1Q96AA3 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC5.36□□□□□ -1.55
RFT1Q96AA3 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RFT1Q96AA3 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
RFT1Q96AA3 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
RFT1Q96AA3 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
RFT1Q96AA3 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5.35□□□□□ -1.55
RFT1Q96AA3 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC5.35□□□□□ -1.55
RFT1Q96AA3 PARP4P2-201ENST00000446672 3326 ntBASIC5.35□□□□□ -1.55
RFT1Q96AA3 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
RFT1Q96AA3 OR52E5-201ENST00000610445 2244 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
RFT1Q96AA3 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RFT1Q96AA3 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RFT1Q96AA3 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RFT1Q96AA3 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.35□□□□□ -1.55
RFT1Q96AA3 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
RFT1Q96AA3 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
RFT1Q96AA3 LZIC-203ENST00000400903 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RFT1Q96AA3 CHRDL1-202ENST00000372045 3860 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RFT1Q96AA3 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
RFT1Q96AA3 AC003045.1-201ENST00000398779 713 ntBASIC5.35□□□□□ -1.55
RFT1Q96AA3 AL033519.1-201ENST00000407266 307 ntBASIC5.35□□□□□ -1.55
RFT1Q96AA3 MIR1266-201ENST00000408125 84 ntBASIC5.35□□□□□ -1.55
RFT1Q96AA3 AC009502.1-203ENST00000416861 496 ntTSL 2 BASIC5.35□□□□□ -1.55
RFT1Q96AA3 RCC2P2-201ENST00000422174 918 ntBASIC5.35□□□□□ -1.55
RFT1Q96AA3 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC5.35□□□□□ -1.55
RFT1Q96AA3 PRUNEP1-201ENST00000425846 705 ntBASIC5.35□□□□□ -1.55
RFT1Q96AA3 AL392003.1-201ENST00000434394 243 ntBASIC5.35□□□□□ -1.55
RFT1Q96AA3 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.35□□□□□ -1.55
RFT1Q96AA3 GAPDHP37-201ENST00000442317 968 ntBASIC5.35□□□□□ -1.55
RFT1Q96AA3 RPSAP40-201ENST00000442343 891 ntBASIC5.35□□□□□ -1.55
RFT1Q96AA3 AC016908.1-201ENST00000442571 1219 ntBASIC5.35□□□□□ -1.55
RFT1Q96AA3 PLGLA-202ENST00000482249 475 ntTSL 3 BASIC5.35□□□□□ -1.55
RFT1Q96AA3 AC091544.1-201ENST00000484702 348 ntBASIC5.35□□□□□ -1.55
RFT1Q96AA3 AC122714.1-201ENST00000502510 459 ntBASIC5.35□□□□□ -1.55
RFT1Q96AA3 AC108159.1-201ENST00000505408 489 ntTSL 3 BASIC5.35□□□□□ -1.55
RFT1Q96AA3 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.35□□□□□ -1.55
RFT1Q96AA3 AC093325.1-201ENST00000508378 326 ntBASIC5.35□□□□□ -1.55
RFT1Q96AA3 AC010343.2-201ENST00000510162 224 ntBASIC5.35□□□□□ -1.55
RFT1Q96AA3 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
RFT1Q96AA3 TOMM22P4-201ENST00000511318 336 ntBASIC5.35□□□□□ -1.55
RFT1Q96AA3 AC111000.6-201ENST00000514471 709 ntBASIC5.35□□□□□ -1.55
RFT1Q96AA3 MINOS1P4-201ENST00000515470 318 ntBASIC5.35□□□□□ -1.55
RFT1Q96AA3 OR6M2P-201ENST00000529831 871 ntBASIC5.35□□□□□ -1.55
RFT1Q96AA3 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.35□□□□□ -1.55
RFT1Q96AA3 AC244502.2-201ENST00000543361 851 ntBASIC5.35□□□□□ -1.55
RFT1Q96AA3 LINC02451-202ENST00000548764 579 ntTSL 4 BASIC5.35□□□□□ -1.55
RFT1Q96AA3 TMEM106C-215ENST00000550552 776 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RFT1Q96AA3 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC5.35□□□□□ -1.55
RFT1Q96AA3 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.35□□□□□ -1.55
RFT1Q96AA3 AC036176.3-201ENST00000602456 418 ntBASIC5.35□□□□□ -1.55
RFT1Q96AA3 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.35□□□□□ -1.55
RFT1Q96AA3 AC090953.1-201ENST00000604305 1092 ntBASIC5.35□□□□□ -1.55
RFT1Q96AA3 AL589743.6-201ENST00000611025 117 ntBASIC5.35□□□□□ -1.55
RFT1Q96AA3 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
RFT1Q96AA3 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.35□□□□□ -1.55
RFT1Q96AA3 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RFT1Q96AA3 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.35□□□□□ -1.55
RFT1Q96AA3 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
RFT1Q96AA3 GRXCR2-201ENST00000377976 2002 ntAPPRIS P1 TSL 2 BASIC5.35□□□□□ -1.55
RFT1Q96AA3 AL136984.1-201ENST00000607611 1893 ntBASIC5.34□□□□□ -1.55
RFT1Q96AA3 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
RFT1Q96AA3 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
RFT1Q96AA3 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
RFT1Q96AA3 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.34□□□□□ -1.55
RFT1Q96AA3 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms