Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 AC005162.1-201ENST00000416513 389 ntTSL 5 BASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 RPS19P6-201ENST00000441327 433 ntBASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 AL031681.1-201ENST00000443304 400 ntBASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 WDR82P2-201ENST00000444540 928 ntBASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 AL162739.1-201ENST00000450606 307 ntBASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 AL358612.1-201ENST00000452911 481 ntTSL 3 BASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 MTATP6P14-201ENST00000455189 673 ntBASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 AC105021.1-201ENST00000455347 590 ntTSL 3 BASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 RN7SL352P-201ENST00000466002 277 ntBASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 AC022730.1-201ENST00000473114 568 ntBASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 AC124945.1-201ENST00000485133 188 ntBASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 RPL34P33-201ENST00000486062 334 ntBASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 AC022826.1-201ENST00000519383 805 ntBASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 AC009879.1-201ENST00000520029 839 ntBASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 IGKV2-4-201ENST00000523070 340 ntBASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 CYCSP25-201ENST00000525280 316 ntBASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 SOX9-AS1-211ENST00000533179 460 ntTSL 3 BASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 AC124891.1-201ENST00000536322 519 ntBASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 SETP3-201ENST00000581726 813 ntBASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 AC063977.7-201ENST00000594454 337 ntBASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 U91328.4-201ENST00000608919 517 ntBASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 AL136097.3-201ENST00000611097 505 ntBASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 MIR6885-201ENST00000612241 66 ntBASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 AC211486.4-201ENST00000621495 113 ntBASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 AL445984.1-201ENST00000637834 659 ntBASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 CASC19-261ENST00000641853 1638 ntBASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 LINC00282-202ENST00000627246 4008 ntAPPRIS P5 TSL 2 BASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
ATG4AQ8WYN0 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 AC119674.1-202ENST00000641333 1860 ntBASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 TIMM21-201ENST00000169551 3095 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 CCR2-201ENST00000292301 2671 ntTSL 5 BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 AC010329.1-201ENST00000593903 8328 ntBASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 SNORD51.1-201ENST00000365405 77 ntBASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 AL353692.2-201ENST00000407054 335 ntBASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 AL360013.1-201ENST00000419031 858 ntBASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 UBE2D3P3-201ENST00000426992 425 ntBASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 KRTAP2-5P-201ENST00000446109 396 ntBASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 CLIC4P1-201ENST00000453177 535 ntBASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 OFD1P3Y-201ENST00000453312 783 ntBASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 AC013549.1-201ENST00000454086 566 ntTSL 3 BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 snoU13.29-201ENST00000459370 104 ntBASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 AC018639.1-201ENST00000492994 442 ntBASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 SSR3-208ENST00000496050 579 ntTSL 4 BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 MTCO2P9-201ENST00000503214 694 ntBASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 AC114324.2-202ENST00000503812 134 ntBASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 AC010468.3-201ENST00000508225 458 ntBASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 OCIAD1-216ENST00000509122 1204 ntTSL 5 BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 LINC02503-201ENST00000510505 812 ntTSL 2 BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 KHDC1P1-201ENST00000511053 508 ntBASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 AC034244.2-201ENST00000514668 858 ntBASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 AC112198.4-201ENST00000515450 351 ntBASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 RNU2-45P-201ENST00000516068 187 ntBASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
ATG4AQ8WYN0 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms