Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC130448.2-201ENST00000624082 374 ntBASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 KARSP2-201ENST00000415696 1639 ntBASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 RAD17P2-201ENST00000451754 1977 ntBASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 TMC3-AS1-206ENST00000612811 2726 ntBASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 MELK-208ENST00000536987 2125 ntTSL 2 BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 TMEM59-204ENST00000371344 2473 ntTSL 2 BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 SULT1C2-205ENST00000437390 1359 ntTSL 2 BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 C8orf34-208ENST00000523686 1948 ntAPPRIS ALT2 TSL 2 BASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 AC022819.1-201ENST00000563495 3910 ntBASIC7.33□□□□□ -1.24
SHKBP1Q8TBC3 MLLT3-203ENST00000380338 6772 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 TENM4-201ENST00000278550 14000 ntAPPRIS P1 TSL 5 BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 OR56A4-201ENST00000330728 1209 ntBASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 Y_RNA.62-201ENST00000362840 99 ntBASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 RN7SKP130-201ENST00000364924 301 ntBASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 Y_RNA.303-201ENST00000364998 94 ntBASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 RN7SKP189-201ENST00000365042 330 ntBASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 MIR421-201ENST00000365696 85 ntBASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 SNORD94-201ENST00000386037 137 ntBASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 TRBV6-7-201ENST00000390373 344 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 OOSP1-201ENST00000398992 1270 ntBASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 RPL24P7-201ENST00000399435 453 ntBASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 GGA1-205ENST00000405147 575 ntTSL 4 BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 RN7SKP221-201ENST00000410420 301 ntBASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 RNU2-18P-201ENST00000411224 162 ntBASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 MGAT2P2-201ENST00000427194 797 ntBASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 AL365220.1-201ENST00000432923 399 ntBASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 MYL6P3-201ENST00000436904 432 ntBASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 AL391361.2-203ENST00000443380 413 ntTSL 2 BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 AL034369.1-201ENST00000453808 477 ntBASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 MTCO3P38-201ENST00000468910 766 ntBASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 AL117692.1-201ENST00000494283 713 ntBASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 AC096741.2-201ENST00000510225 637 ntTSL 5 BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 AC067904.2-201ENST00000517322 1283 ntBASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 AP005902.2-201ENST00000518393 307 ntBASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 IGLVV-66-201ENST00000523818 341 ntBASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 BLZF2P-201ENST00000553776 1130 ntBASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 RPS3AP4-201ENST00000555161 764 ntBASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 AL136018.1-202ENST00000555300 488 ntTSL 5 BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 PPIAP6-201ENST00000557078 499 ntBASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 AC026458.1-201ENST00000564330 438 ntBASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 PPIAP14-201ENST00000577627 496 ntBASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 MIMT1-201ENST00000597105 1050 ntBASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 AP000255.1-201ENST00000610276 676 ntBASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 AL049541.2-201ENST00000626377 555 ntBASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 VIPR1-AS1-221ENST00000626992 602 ntTSL 5 BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 NEUROD4-201ENST00000242994 3953 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 IFNG-AS1-202ENST00000538665 1791 ntTSL 2 BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 MYO1B-203ENST00000392316 4764 ntTSL 5 BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 GABRA2-215ENST00000540012 2588 ntTSL 5 BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 ATP5BP1-201ENST00000411980 1574 ntBASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 WDR48-201ENST00000302313 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 KDELC2-202ENST00000434945 4374 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 AP002800.1-201ENST00000624982 2225 ntBASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 GPX6-201ENST00000361902 1712 ntAPPRIS P2 TSL 1 (best) BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 GPX6-204ENST00000612264 1709 ntAPPRIS ALT1 TSL 5 BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 CCDC162P-202ENST00000368966 6751 ntBASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 RN7SKP23-201ENST00000625159 4301 ntBASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 LRAT-206ENST00000507827 2654 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 MDM4-205ENST00000391947 10008 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 USPL1-203ENST00000614860 4074 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 RAB6C-AS1-201ENST00000412425 2454 ntTSL 1 (best) BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 CCDC77-210ENST00000540180 1652 ntAPPRIS ALT2 TSL 2 BASIC7.32□□□□□ -1.24
SHKBP1Q8TBC3 ZC3H8-202ENST00000409573 5965 ntAPPRIS P2 TSL 5 BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 LINC01559-201ENST00000318426 2750 ntTSL 2 BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 CDY2A-201ENST00000250838 1954 ntAPPRIS ALT1 BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 QTRT2-212ENST00000485050 3844 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
SHKBP1Q8TBC3 PRRC1-204ENST00000512635 2726 ntTSL 1 (best) BASIC7.31□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 96 ms