Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AK3P4-201ENST00000504283 583 ntBASIC8.86□□□□□ -0.99
VARS2Q5ST30 AF186996.3-201ENST00000509527 964 ntBASIC8.86□□□□□ -0.99
VARS2Q5ST30 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC8.86□□□□□ -0.99
VARS2Q5ST30 LINC02428-203ENST00000513793 438 ntTSL 5 BASIC8.86□□□□□ -0.99
VARS2Q5ST30 AP003467.2-201ENST00000520175 319 ntBASIC8.86□□□□□ -0.99
VARS2Q5ST30 AC087808.1-201ENST00000520501 361 ntBASIC8.86□□□□□ -0.99
VARS2Q5ST30 PPP1R1AP1-201ENST00000525622 425 ntBASIC8.86□□□□□ -0.99
VARS2Q5ST30 AP000781.1-201ENST00000534162 311 ntTSL 3 BASIC8.86□□□□□ -0.99
VARS2Q5ST30 PSMA6-202ENST00000540871 912 ntTSL 2 BASIC8.86□□□□□ -0.99
VARS2Q5ST30 AC079385.3-201ENST00000552415 809 ntTSL 3 BASIC8.86□□□□□ -0.99
VARS2Q5ST30 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
VARS2Q5ST30 SNHG19-201ENST00000563192 342 ntTSL 2 BASIC8.86□□□□□ -0.99
VARS2Q5ST30 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC8.86□□□□□ -0.99
VARS2Q5ST30 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC8.86□□□□□ -0.99
VARS2Q5ST30 AC011468.2-202ENST00000594362 579 ntTSL 5 BASIC8.86□□□□□ -0.99
VARS2Q5ST30 AC020908.2-201ENST00000595134 405 ntTSL 2 BASIC8.86□□□□□ -0.99
VARS2Q5ST30 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC8.86□□□□□ -0.99
VARS2Q5ST30 AC006238.1-201ENST00000609787 534 ntBASIC8.86□□□□□ -0.99
VARS2Q5ST30 BX323046.1-201ENST00000610145 535 ntBASIC8.86□□□□□ -0.99
VARS2Q5ST30 MIR6127-201ENST00000614019 109 ntBASIC8.86□□□□□ -0.99
VARS2Q5ST30 AL022318.4-202ENST00000622217 591 ntTSL 5 BASIC8.86□□□□□ -0.99
VARS2Q5ST30 PISRT1-201ENST00000626175 531 ntBASIC8.86□□□□□ -0.99
VARS2Q5ST30 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC8.86□□□□□ -0.99
VARS2Q5ST30 AC068512.1-201ENST00000584542 1811 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
VARS2Q5ST30 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC8.86□□□□□ -0.99
VARS2Q5ST30 AF228730.7-203ENST00000641436 1804 ntBASIC8.86□□□□□ -0.99
VARS2Q5ST30 CCT5P1-201ENST00000502314 1618 ntBASIC8.86□□□□□ -0.99
VARS2Q5ST30 EIF3F-208ENST00000533626 7540 ntAPPRIS P1 TSL 2 BASIC8.86□□□□□ -0.99
VARS2Q5ST30 ELF4-204ENST00000615377 3878 ntTSL 5 BASIC8.86□□□□□ -0.99
VARS2Q5ST30 WISP3-204ENST00000368666 2700 ntTSL 1 (best) BASIC8.86□□□□□ -0.99
VARS2Q5ST30 GLRA4-201ENST00000372617 1795 ntAPPRIS P1 TSL 5 BASIC8.86□□□□□ -0.99
VARS2Q5ST30 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC8.86□□□□□ -0.99
VARS2Q5ST30 SOCS5P5-201ENST00000402732 1586 ntBASIC8.86□□□□□ -0.99
VARS2Q5ST30 RRN3-201ENST00000198767 3762 ntAPPRIS P1 TSL 1 (best) BASIC8.86□□□□□ -0.99
VARS2Q5ST30 ZNF701-201ENST00000301093 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC8.85□□□□□ -0.99
VARS2Q5ST30 TCTN1-201ENST00000377654 1539 ntTSL 5 BASIC8.85□□□□□ -0.99
VARS2Q5ST30 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
VARS2Q5ST30 UBAP2L-220ENST00000613315 3451 ntTSL 2 BASIC8.85□□□□□ -0.99
VARS2Q5ST30 CCDC129-202ENST00000407970 3269 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
VARS2Q5ST30 ZEB2-AS1-202ENST00000427278 1322 ntTSL 5 BASIC8.85□□□□□ -0.99
VARS2Q5ST30 ANKFY1-209ENST00000574367 5033 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
VARS2Q5ST30 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC8.85□□□□□ -0.99
VARS2Q5ST30 HIPK1-208ENST00000426820 4112 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
VARS2Q5ST30 CSF2RA-206ENST00000381529 1816 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
VARS2Q5ST30 DCSTAMP-208ENST00000622554 1471 ntTSL 5 BASIC8.85□□□□□ -0.99
VARS2Q5ST30 CLASP1-203ENST00000409078 8002 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
VARS2Q5ST30 CAST-213ENST00000504465 2336 ntAPPRIS ALT2 TSL 2 BASIC8.85□□□□□ -0.99
VARS2Q5ST30 OR9I1-202ENST00000641439 3184 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
VARS2Q5ST30 HELQ-204ENST00000510985 3315 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
VARS2Q5ST30 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC8.85□□□□□ -0.99
VARS2Q5ST30 OR1S2-201ENST00000302592 978 ntBASIC8.85□□□□□ -0.99
VARS2Q5ST30 ANKS1B-201ENST00000329257 996 ntTSL 5 BASIC8.85□□□□□ -0.99
VARS2Q5ST30 Y_RNA.187-201ENST00000363918 113 ntBASIC8.85□□□□□ -0.99
VARS2Q5ST30 DCAF8-203ENST00000368074 3824 ntAPPRIS P1 TSL 5 BASIC8.85□□□□□ -0.99
VARS2Q5ST30 FIG4-202ENST00000368941 791 ntTSL 3 BASIC8.85□□□□□ -0.99
VARS2Q5ST30 RPE-204ENST00000411934 792 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
VARS2Q5ST30 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC8.85□□□□□ -0.99
VARS2Q5ST30 DPH3P2-201ENST00000422618 250 ntBASIC8.85□□□□□ -0.99
VARS2Q5ST30 DSTNP5-201ENST00000427921 523 ntBASIC8.85□□□□□ -0.99
VARS2Q5ST30 AC096644.2-201ENST00000429278 159 ntBASIC8.85□□□□□ -0.99
VARS2Q5ST30 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC8.85□□□□□ -0.99
VARS2Q5ST30 RPL29P7-201ENST00000440227 457 ntBASIC8.85□□□□□ -0.99
VARS2Q5ST30 AC012512.1-201ENST00000446594 718 ntBASIC8.85□□□□□ -0.99
VARS2Q5ST30 AC092570.2-201ENST00000452117 1143 ntBASIC8.85□□□□□ -0.99
VARS2Q5ST30 RN7SL272P-201ENST00000487762 289 ntBASIC8.85□□□□□ -0.99
VARS2Q5ST30 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC8.85□□□□□ -0.99
VARS2Q5ST30 LINC02024-203ENST00000496994 489 ntTSL 3 BASIC8.85□□□□□ -0.99
VARS2Q5ST30 AL031073.1-201ENST00000503029 1139 ntBASIC8.85□□□□□ -0.99
VARS2Q5ST30 GAPDHP38-201ENST00000503632 1002 ntBASIC8.85□□□□□ -0.99
VARS2Q5ST30 AC104063.1-201ENST00000504840 702 ntTSL 3 BASIC8.85□□□□□ -0.99
VARS2Q5ST30 GAPDHP56-201ENST00000506031 988 ntBASIC8.85□□□□□ -0.99
VARS2Q5ST30 AC017091.1-202ENST00000510941 504 ntTSL 3 BASIC8.85□□□□□ -0.99
VARS2Q5ST30 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC8.85□□□□□ -0.99
VARS2Q5ST30 RNU4-49P-201ENST00000516080 140 ntBASIC8.85□□□□□ -0.99
VARS2Q5ST30 AC136424.1-201ENST00000518425 542 ntTSL 4 BASIC8.85□□□□□ -0.99
VARS2Q5ST30 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC8.85□□□□□ -0.99
VARS2Q5ST30 AC079363.1-201ENST00000551366 1125 ntBASIC8.85□□□□□ -0.99
VARS2Q5ST30 RGS6-215ENST00000554782 1110 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
VARS2Q5ST30 AC034105.3-201ENST00000565294 442 ntBASIC8.85□□□□□ -0.99
VARS2Q5ST30 MIR4786-201ENST00000583954 80 ntBASIC8.85□□□□□ -0.99
VARS2Q5ST30 AC114488.2-207ENST00000585660 700 ntTSL 5 BASIC8.85□□□□□ -0.99
VARS2Q5ST30 AC011816.2-201ENST00000607089 556 ntBASIC8.85□□□□□ -0.99
VARS2Q5ST30 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC8.85□□□□□ -0.99
VARS2Q5ST30 AC099811.5-201ENST00000617211 819 ntTSL 5 BASIC8.85□□□□□ -0.99
VARS2Q5ST30 Metazoa_SRP.20-201ENST00000619896 275 ntBASIC8.85□□□□□ -0.99
VARS2Q5ST30 AC091953.5-201ENST00000622919 233 ntBASIC8.85□□□□□ -0.99
VARS2Q5ST30 AC005703.1-201ENST00000431343 1773 ntTSL 2 BASIC8.85□□□□□ -0.99
VARS2Q5ST30 CAST-222ENST00000508579 1758 ntTSL 2 BASIC8.85□□□□□ -0.99
VARS2Q5ST30 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC8.85□□□□□ -0.99
VARS2Q5ST30 C2orf91-201ENST00000378711 3721 ntAPPRIS P2 TSL 2 BASIC8.85□□□□□ -0.99
VARS2Q5ST30 IPO11-201ENST00000325324 4356 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
VARS2Q5ST30 AL583836.1-201ENST00000464755 2395 ntAPPRIS P1 TSL 2 BASIC8.85□□□□□ -0.99
VARS2Q5ST30 GFM2-207ENST00000509430 3047 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
VARS2Q5ST30 BTBD3-215ENST00000618918 4486 ntAPPRIS ALT1 TSL 4 BASIC8.85□□□□□ -0.99
VARS2Q5ST30 TNS1-201ENST00000171887 10331 ntAPPRIS P3 TSL 1 (best) BASIC8.85□□□□□ -0.99
VARS2Q5ST30 CSTF3-AS1-201ENST00000500025 2031 ntTSL 1 (best) BASIC8.85□□□□□ -0.99
VARS2Q5ST30 PACRG-202ENST00000366888 1373 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
VARS2Q5ST30 EEF1A1P22-201ENST00000559385 1380 ntBASIC8.85□□□□□ -0.99
VARS2Q5ST30 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC8.85□□□□□ -0.99
VARS2Q5ST30 THG1L-201ENST00000231198 3107 ntAPPRIS P1 TSL 1 (best) BASIC8.85□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 82.4 ms