Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 NREP-223ENST00000515855 801 ntTSL 4 BASIC5.28□□□□□ -1.56
CCDC58Q4VC31 RNA5SP434-201ENST00000516647 121 ntBASIC5.28□□□□□ -1.56
CCDC58Q4VC31 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC58Q4VC31 AC015468.2-201ENST00000519605 550 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC58Q4VC31 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC5.28□□□□□ -1.56
CCDC58Q4VC31 OR10D4P-201ENST00000525892 951 ntBASIC5.28□□□□□ -1.56
CCDC58Q4VC31 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC58Q4VC31 AC084824.2-201ENST00000548906 345 ntBASIC5.28□□□□□ -1.56
CCDC58Q4VC31 AC126615.2-201ENST00000553003 515 ntBASIC5.28□□□□□ -1.56
CCDC58Q4VC31 AC078778.2-201ENST00000553061 567 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC58Q4VC31 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC58Q4VC31 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC58Q4VC31 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.28□□□□□ -1.56
CCDC58Q4VC31 MIR378H-201ENST00000579966 83 ntBASIC5.28□□□□□ -1.56
CCDC58Q4VC31 LINC01198-207ENST00000598084 881 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC58Q4VC31 AP001823.1-201ENST00000604056 1003 ntBASIC5.28□□□□□ -1.56
CCDC58Q4VC31 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC5.28□□□□□ -1.56
CCDC58Q4VC31 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC58Q4VC31 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
CCDC58Q4VC31 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC58Q4VC31 AC027506.1-201ENST00000621395 198 ntBASIC5.28□□□□□ -1.56
CCDC58Q4VC31 ASB8-218ENST00000629941 278 ntTSL 5 BASIC5.28□□□□□ -1.56
CCDC58Q4VC31 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCDC58Q4VC31 GJA9-202ENST00000360786 1901 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
CCDC58Q4VC31 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
CCDC58Q4VC31 ICE2P1-201ENST00000512800 1849 ntBASIC5.27□□□□□ -1.57
CCDC58Q4VC31 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC58Q4VC31 AL034546.1-201ENST00000623740 3693 ntBASIC5.27□□□□□ -1.57
CCDC58Q4VC31 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC58Q4VC31 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC58Q4VC31 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC58Q4VC31 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC58Q4VC31 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
CCDC58Q4VC31 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
CCDC58Q4VC31 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.27□□□□□ -1.57
CCDC58Q4VC31 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC58Q4VC31 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC58Q4VC31 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CCDC58Q4VC31 KRTAP19-6-201ENST00000334046 330 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CCDC58Q4VC31 RN7SKP144-201ENST00000411108 279 ntBASIC5.27□□□□□ -1.57
CCDC58Q4VC31 AL360013.1-201ENST00000419031 858 ntBASIC5.27□□□□□ -1.57
CCDC58Q4VC31 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.27□□□□□ -1.57
CCDC58Q4VC31 NPM1P22-201ENST00000427761 952 ntBASIC5.27□□□□□ -1.57
CCDC58Q4VC31 AF196972.1-201ENST00000445586 653 ntTSL 3 BASIC5.27□□□□□ -1.57
CCDC58Q4VC31 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC58Q4VC31 RARRES2P3-201ENST00000457739 473 ntBASIC5.27□□□□□ -1.57
CCDC58Q4VC31 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC58Q4VC31 RN7SL188P-201ENST00000469842 285 ntBASIC5.27□□□□□ -1.57
CCDC58Q4VC31 RN7SL655P-201ENST00000486087 298 ntBASIC5.27□□□□□ -1.57
CCDC58Q4VC31 AC069304.1-201ENST00000491593 704 ntBASIC5.27□□□□□ -1.57
CCDC58Q4VC31 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC58Q4VC31 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC5.27□□□□□ -1.57
CCDC58Q4VC31 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.27□□□□□ -1.57
CCDC58Q4VC31 AC008868.1-201ENST00000509786 737 ntBASIC5.27□□□□□ -1.57
CCDC58Q4VC31 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC58Q4VC31 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
CCDC58Q4VC31 AC008680.1-201ENST00000523398 283 ntTSL 3 BASIC5.27□□□□□ -1.57
CCDC58Q4VC31 AC103855.4-201ENST00000533158 265 ntBASIC5.27□□□□□ -1.57
CCDC58Q4VC31 OR9G2P-201ENST00000533326 880 ntBASIC5.27□□□□□ -1.57
CCDC58Q4VC31 AC090424.1-201ENST00000535243 736 ntBASIC5.27□□□□□ -1.57
CCDC58Q4VC31 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC5.27□□□□□ -1.57
CCDC58Q4VC31 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC58Q4VC31 BMS1P16-201ENST00000556075 1147 ntBASIC5.27□□□□□ -1.57
CCDC58Q4VC31 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.27□□□□□ -1.57
CCDC58Q4VC31 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC5.27□□□□□ -1.57
CCDC58Q4VC31 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC58Q4VC31 TEX26-AS1-204ENST00000585582 853 ntTSL 5 BASIC5.27□□□□□ -1.57
CCDC58Q4VC31 LINC01198-204ENST00000594153 552 ntTSL 3 BASIC5.27□□□□□ -1.57
CCDC58Q4VC31 AC011483.2-201ENST00000594512 536 ntTSL 4 BASIC5.27□□□□□ -1.57
CCDC58Q4VC31 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC5.27□□□□□ -1.57
CCDC58Q4VC31 Metazoa_SRP.66-201ENST00000615609 282 ntBASIC5.27□□□□□ -1.57
CCDC58Q4VC31 AL445670.1-201ENST00000618889 801 ntBASIC5.27□□□□□ -1.57
CCDC58Q4VC31 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.27□□□□□ -1.57
CCDC58Q4VC31 SKIV2L-216ENST00000628157 210 ntTSL 5 BASIC5.27□□□□□ -1.57
CCDC58Q4VC31 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.27□□□□□ -1.57
CCDC58Q4VC31 AC119674.1-202ENST00000641333 1860 ntBASIC5.27□□□□□ -1.57
CCDC58Q4VC31 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC58Q4VC31 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCDC58Q4VC31 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CCDC58Q4VC31 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
CCDC58Q4VC31 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
CCDC58Q4VC31 OOSP2-201ENST00000278855 1633 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC58Q4VC31 CASC19-246ENST00000641625 1606 ntBASIC5.26□□□□□ -1.57
CCDC58Q4VC31 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC58Q4VC31 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC58Q4VC31 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC58Q4VC31 OR10R3P-201ENST00000361688 942 ntBASIC5.26□□□□□ -1.57
CCDC58Q4VC31 RNA5SP211-201ENST00000365516 117 ntBASIC5.26□□□□□ -1.57
CCDC58Q4VC31 AC092634.1-201ENST00000366505 199 ntBASIC5.26□□□□□ -1.57
CCDC58Q4VC31 APOOL-201ENST00000373173 1279 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC58Q4VC31 RNA5SP156-201ENST00000410250 110 ntBASIC5.26□□□□□ -1.57
CCDC58Q4VC31 RPS7P8-201ENST00000418311 581 ntBASIC5.26□□□□□ -1.57
CCDC58Q4VC31 CLCN3P1-201ENST00000423965 1017 ntBASIC5.26□□□□□ -1.57
CCDC58Q4VC31 NDUFB3-202ENST00000433898 503 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
CCDC58Q4VC31 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.26□□□□□ -1.57
CCDC58Q4VC31 AC096775.1-201ENST00000437724 448 ntBASIC5.26□□□□□ -1.57
CCDC58Q4VC31 RPS10P14-201ENST00000440748 502 ntBASIC5.26□□□□□ -1.57
CCDC58Q4VC31 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
CCDC58Q4VC31 NPM1P9-201ENST00000453156 844 ntBASIC5.26□□□□□ -1.57
CCDC58Q4VC31 AL117382.2-201ENST00000455642 403 ntTSL 3 BASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms