Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 MIR4271-201ENST00000582451 67 ntBASIC5.63□□□□□ -1.51
HMGCS1Q01581 AC010271.1-201ENST00000599050 558 ntTSL 4 BASIC5.63□□□□□ -1.51
HMGCS1Q01581 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.63□□□□□ -1.51
HMGCS1Q01581 AL136228.1-201ENST00000622221 319 ntBASIC5.63□□□□□ -1.51
HMGCS1Q01581 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HMGCS1Q01581 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HMGCS1Q01581 AC104966.1-201ENST00000467010 1464 ntBASIC5.63□□□□□ -1.51
HMGCS1Q01581 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.63□□□□□ -1.51
HMGCS1Q01581 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
HMGCS1Q01581 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
HMGCS1Q01581 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HMGCS1Q01581 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HMGCS1Q01581 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HMGCS1Q01581 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
HMGCS1Q01581 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HMGCS1Q01581 NCOA7-208ENST00000438495 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HMGCS1Q01581 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HMGCS1Q01581 PARP4P2-201ENST00000446672 3326 ntBASIC5.62□□□□□ -1.51
HMGCS1Q01581 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
HMGCS1Q01581 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
HMGCS1Q01581 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HMGCS1Q01581 SNORA51.9-201ENST00000384295 124 ntBASIC5.62□□□□□ -1.51
HMGCS1Q01581 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
HMGCS1Q01581 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HMGCS1Q01581 METTL15P3-201ENST00000415522 1221 ntBASIC5.62□□□□□ -1.51
HMGCS1Q01581 AL512353.1-202ENST00000416809 627 ntTSL 3 BASIC5.62□□□□□ -1.51
HMGCS1Q01581 KIF4CP-201ENST00000422742 1279 ntBASIC5.62□□□□□ -1.51
HMGCS1Q01581 AC007679.3-201ENST00000434035 414 ntBASIC5.62□□□□□ -1.51
HMGCS1Q01581 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HMGCS1Q01581 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.62□□□□□ -1.51
HMGCS1Q01581 AL021937.3-201ENST00000446543 361 ntTSL 2 BASIC5.62□□□□□ -1.51
HMGCS1Q01581 AC097463.1-201ENST00000447288 481 ntBASIC5.62□□□□□ -1.51
HMGCS1Q01581 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC5.62□□□□□ -1.51
HMGCS1Q01581 IGKV2-19-201ENST00000518132 283 ntBASIC5.62□□□□□ -1.51
HMGCS1Q01581 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.62□□□□□ -1.51
HMGCS1Q01581 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.62□□□□□ -1.51
HMGCS1Q01581 AL121594.2-201ENST00000541658 472 ntBASIC5.62□□□□□ -1.51
HMGCS1Q01581 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.62□□□□□ -1.51
HMGCS1Q01581 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.62□□□□□ -1.51
HMGCS1Q01581 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC5.62□□□□□ -1.51
HMGCS1Q01581 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.62□□□□□ -1.51
HMGCS1Q01581 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HMGCS1Q01581 PDE4D-202ENST00000317118 2599 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HMGCS1Q01581 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HMGCS1Q01581 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
HMGCS1Q01581 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HMGCS1Q01581 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HMGCS1Q01581 HSPD1P9-201ENST00000420325 1636 ntBASIC5.62□□□□□ -1.51
HMGCS1Q01581 AL049634.1-201ENST00000453770 1720 ntBASIC5.62□□□□□ -1.51
HMGCS1Q01581 FGF1-214ENST00000612258 3805 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HMGCS1Q01581 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.62□□□□□ -1.51
HMGCS1Q01581 SLC1A2-203ENST00000395753 11689 ntAPPRIS ALT1 TSL 2 BASIC5.62□□□□□ -1.51
HMGCS1Q01581 PPFIBP1-201ENST00000228425 5933 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HMGCS1Q01581 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HMGCS1Q01581 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
HMGCS1Q01581 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.62□□□□□ -1.51
HMGCS1Q01581 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
HMGCS1Q01581 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HMGCS1Q01581 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
HMGCS1Q01581 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HMGCS1Q01581 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.61□□□□□ -1.51
HMGCS1Q01581 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
HMGCS1Q01581 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.61□□□□□ -1.51
HMGCS1Q01581 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HMGCS1Q01581 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
HMGCS1Q01581 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
HMGCS1Q01581 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
HMGCS1Q01581 RNA5SP91-201ENST00000390902 119 ntBASIC5.61□□□□□ -1.51
HMGCS1Q01581 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC5.61□□□□□ -1.51
HMGCS1Q01581 VN1R12P-201ENST00000403778 876 ntBASIC5.61□□□□□ -1.51
HMGCS1Q01581 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC5.61□□□□□ -1.51
HMGCS1Q01581 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.61□□□□□ -1.51
HMGCS1Q01581 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.61□□□□□ -1.51
HMGCS1Q01581 LINC01363-202ENST00000428030 930 ntTSL 3 BASIC5.61□□□□□ -1.51
HMGCS1Q01581 GAPDHP75-201ENST00000433910 943 ntBASIC5.61□□□□□ -1.51
HMGCS1Q01581 PNKDP1-201ENST00000435914 430 ntBASIC5.61□□□□□ -1.51
HMGCS1Q01581 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HMGCS1Q01581 AC023141.8-201ENST00000442554 208 ntBASIC5.61□□□□□ -1.51
HMGCS1Q01581 AC022387.1-201ENST00000444770 794 ntTSL 3 BASIC5.61□□□□□ -1.51
HMGCS1Q01581 RPL5P10-201ENST00000445207 894 ntBASIC5.61□□□□□ -1.51
HMGCS1Q01581 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HMGCS1Q01581 AC009963.3-201ENST00000458090 486 ntBASIC5.61□□□□□ -1.51
HMGCS1Q01581 AC098847.1-201ENST00000473094 348 ntBASIC5.61□□□□□ -1.51
HMGCS1Q01581 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.61□□□□□ -1.51
HMGCS1Q01581 RN7SKP238-201ENST00000516483 249 ntBASIC5.61□□□□□ -1.51
HMGCS1Q01581 IGKV3D-25-201ENST00000519599 235 ntBASIC5.61□□□□□ -1.51
HMGCS1Q01581 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.61□□□□□ -1.51
HMGCS1Q01581 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC5.61□□□□□ -1.51
HMGCS1Q01581 AC104241.1-201ENST00000530039 628 ntTSL 3 BASIC5.61□□□□□ -1.51
HMGCS1Q01581 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HMGCS1Q01581 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.61□□□□□ -1.51
HMGCS1Q01581 AL671883.2-201ENST00000539514 536 ntTSL 4 BASIC5.61□□□□□ -1.51
HMGCS1Q01581 TCEANC-205ENST00000544987 1146 ntTSL 5 BASIC5.61□□□□□ -1.51
HMGCS1Q01581 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.61□□□□□ -1.51
HMGCS1Q01581 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.61□□□□□ -1.51
HMGCS1Q01581 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.61□□□□□ -1.51
HMGCS1Q01581 LINC00907-202ENST00000585639 915 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
HMGCS1Q01581 AC090220.1-201ENST00000593078 1699 ntBASIC5.61□□□□□ -1.51
HMGCS1Q01581 AC091167.5-201ENST00000605689 894 ntBASIC5.61□□□□□ -1.51
HMGCS1Q01581 CCL23-201ENST00000612516 569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 127.7 ms