Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 AP001267.3-202ENST00000525992 448 ntTSL 3 BASIC6□□□□□ -1.45
NKX6-1P78426 LRRC6P1-201ENST00000532188 885 ntBASIC6□□□□□ -1.45
NKX6-1P78426 HPS5-207ENST00000537258 1275 ntTSL 5 BASIC6□□□□□ -1.45
NKX6-1P78426 LRRC34P1-201ENST00000542742 915 ntBASIC6□□□□□ -1.45
NKX6-1P78426 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC6□□□□□ -1.45
NKX6-1P78426 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC6□□□□□ -1.45
NKX6-1P78426 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6□□□□□ -1.45
NKX6-1P78426 RAB27A-205ENST00000564609 1057 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NKX6-1P78426 ULK4P1-202ENST00000565174 503 ntBASIC6□□□□□ -1.45
NKX6-1P78426 NDUFA5P11-201ENST00000567995 343 ntBASIC6□□□□□ -1.45
NKX6-1P78426 AL365259.1-201ENST00000606334 509 ntTSL 5 BASIC6□□□□□ -1.45
NKX6-1P78426 AC241377.2-201ENST00000612313 553 ntTSL 4 BASIC6□□□□□ -1.45
NKX6-1P78426 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
NKX6-1P78426 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6□□□□□ -1.45
NKX6-1P78426 AC006963.1-201ENST00000624003 1052 ntBASIC6□□□□□ -1.45
NKX6-1P78426 AC068213.1-201ENST00000625124 226 ntBASIC6□□□□□ -1.45
NKX6-1P78426 AL157778.1-201ENST00000626665 729 ntTSL 3 BASIC6□□□□□ -1.45
NKX6-1P78426 AC011471.4-201ENST00000638271 216 ntBASIC6□□□□□ -1.45
NKX6-1P78426 SBNO1-201ENST00000267176 11121 ntAPPRIS P3 TSL 5 BASIC6□□□□□ -1.45
NKX6-1P78426 EYA3-204ENST00000436342 5943 ntTSL 2 BASIC6□□□□□ -1.45
NKX6-1P78426 DMD-228ENST00000541735 7080 ntTSL 5 BASIC6□□□□□ -1.45
NKX6-1P78426 NRCAM-201ENST00000351718 6228 ntAPPRIS P3 TSL 1 (best) BASIC6□□□□□ -1.45
NKX6-1P78426 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
NKX6-1P78426 ATP5BP1-201ENST00000411980 1574 ntBASIC6□□□□□ -1.45
NKX6-1P78426 JADE3-203ENST00000611250 4713 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
NKX6-1P78426 AC129502.1-201ENST00000623261 1654 ntBASIC6□□□□□ -1.45
NKX6-1P78426 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6□□□□□ -1.45
NKX6-1P78426 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
NKX6-1P78426 MEF2C-AS1-214ENST00000514794 2350 ntTSL 4 BASIC6□□□□□ -1.45
NKX6-1P78426 PPP3R2-201ENST00000374806 3387 ntAPPRIS P1 BASIC6□□□□□ -1.45
NKX6-1P78426 HEPH-203ENST00000419594 3694 ntTSL 1 (best) BASIC6□□□□□ -1.45
NKX6-1P78426 CSDE1-205ENST00000438362 4167 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NKX6-1P78426 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC5.99□□□□□ -1.45
NKX6-1P78426 AC005034.3-201ENST00000604845 1747 ntBASIC5.99□□□□□ -1.45
NKX6-1P78426 PAIP1-202ENST00000338972 1814 ntAPPRIS P3 TSL 5 BASIC5.99□□□□□ -1.45
NKX6-1P78426 NCOA4P2-201ENST00000340589 1813 ntBASIC5.99□□□□□ -1.45
NKX6-1P78426 DCAF13-210ENST00000618975 2038 ntTSL 2 BASIC5.99□□□□□ -1.45
NKX6-1P78426 HEPACAM2-201ENST00000341723 2122 ntAPPRIS P3 TSL 1 (best) BASIC5.99□□□□□ -1.45
NKX6-1P78426 LRP2BP-202ENST00000505916 2302 ntAPPRIS P1 TSL 2 BASIC5.99□□□□□ -1.45
NKX6-1P78426 TMEM135-201ENST00000305494 2433 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NKX6-1P78426 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NKX6-1P78426 TLR1-201ENST00000308979 2849 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NKX6-1P78426 RGPD3-201ENST00000304514 5510 ntAPPRIS ALT2 TSL 2 BASIC5.99□□□□□ -1.45
NKX6-1P78426 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NKX6-1P78426 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC5.99□□□□□ -1.45
NKX6-1P78426 FABP2-201ENST00000274024 2478 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NKX6-1P78426 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NKX6-1P78426 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.99□□□□□ -1.45
NKX6-1P78426 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
NKX6-1P78426 NXF4-202ENST00000416098 1465 ntBASIC5.99□□□□□ -1.45
NKX6-1P78426 ATP13A5-201ENST00000342358 4027 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NKX6-1P78426 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC5.99□□□□□ -1.45
NKX6-1P78426 RNA5SP232-201ENST00000364144 119 ntBASIC5.99□□□□□ -1.45
NKX6-1P78426 RN7SKP130-201ENST00000364924 301 ntBASIC5.99□□□□□ -1.45
NKX6-1P78426 SNORA64.3-201ENST00000365647 134 ntBASIC5.99□□□□□ -1.45
NKX6-1P78426 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.99□□□□□ -1.45
NKX6-1P78426 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC5.99□□□□□ -1.45
NKX6-1P78426 RNA5SP122-201ENST00000384457 108 ntBASIC5.99□□□□□ -1.45
NKX6-1P78426 TAS2R15P-201ENST00000390674 928 ntBASIC5.99□□□□□ -1.45
NKX6-1P78426 LINC00362-201ENST00000414345 264 ntTSL 2 BASIC5.99□□□□□ -1.45
NKX6-1P78426 DAB1-AS1-201ENST00000416598 1262 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NKX6-1P78426 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC5.99□□□□□ -1.45
NKX6-1P78426 XKRYP1-201ENST00000423438 492 ntBASIC5.99□□□□□ -1.45
NKX6-1P78426 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.99□□□□□ -1.45
NKX6-1P78426 OR6R1P-201ENST00000431838 940 ntBASIC5.99□□□□□ -1.45
NKX6-1P78426 XKRYP2-201ENST00000432915 492 ntBASIC5.99□□□□□ -1.45
NKX6-1P78426 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC5.99□□□□□ -1.45
NKX6-1P78426 AL158828.1-201ENST00000438582 197 ntTSL 5 BASIC5.99□□□□□ -1.45
NKX6-1P78426 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC5.99□□□□□ -1.45
NKX6-1P78426 AL034399.1-201ENST00000451535 380 ntBASIC5.99□□□□□ -1.45
NKX6-1P78426 AL138737.1-201ENST00000456896 1252 ntTSL 5 BASIC5.99□□□□□ -1.45
NKX6-1P78426 AL096803.1-201ENST00000456921 1021 ntBASIC5.99□□□□□ -1.45
NKX6-1P78426 AC131233.1-201ENST00000479200 955 ntBASIC5.99□□□□□ -1.45
NKX6-1P78426 RN7SL37P-201ENST00000490461 307 ntBASIC5.99□□□□□ -1.45
NKX6-1P78426 RPS10P20-201ENST00000494130 463 ntBASIC5.99□□□□□ -1.45
NKX6-1P78426 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.99□□□□□ -1.45
NKX6-1P78426 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.99□□□□□ -1.45
NKX6-1P78426 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.99□□□□□ -1.45
NKX6-1P78426 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC5.99□□□□□ -1.45
NKX6-1P78426 AC093878.1-201ENST00000515630 432 ntBASIC5.99□□□□□ -1.45
NKX6-1P78426 AC008708.1-201ENST00000517346 474 ntTSL 3 BASIC5.99□□□□□ -1.45
NKX6-1P78426 AC105150.1-201ENST00000518011 551 ntTSL 3 BASIC5.99□□□□□ -1.45
NKX6-1P78426 AC007537.1-201ENST00000539347 327 ntBASIC5.99□□□□□ -1.45
NKX6-1P78426 AL163973.2-201ENST00000548096 288 ntTSL 3 BASIC5.99□□□□□ -1.45
NKX6-1P78426 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC5.99□□□□□ -1.45
NKX6-1P78426 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC5.99□□□□□ -1.45
NKX6-1P78426 MT1CP-201ENST00000567054 174 ntBASIC5.99□□□□□ -1.45
NKX6-1P78426 MIR4789-201ENST00000577469 82 ntBASIC5.99□□□□□ -1.45
NKX6-1P78426 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC5.99□□□□□ -1.45
NKX6-1P78426 AP002884.5-201ENST00000595053 1132 ntBASIC5.99□□□□□ -1.45
NKX6-1P78426 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC5.99□□□□□ -1.45
NKX6-1P78426 AC012370.2-201ENST00000597541 1080 ntTSL 5 BASIC5.99□□□□□ -1.45
NKX6-1P78426 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.99□□□□□ -1.45
NKX6-1P78426 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC5.99□□□□□ -1.45
NKX6-1P78426 BX323046.1-201ENST00000610145 535 ntBASIC5.99□□□□□ -1.45
NKX6-1P78426 AC048344.4-201ENST00000619744 527 ntBASIC5.99□□□□□ -1.45
NKX6-1P78426 AP005212.3-201ENST00000619964 528 ntBASIC5.99□□□□□ -1.45
NKX6-1P78426 AC010435.1-201ENST00000623353 1177 ntBASIC5.99□□□□□ -1.45
NKX6-1P78426 AC024023.1-201ENST00000624530 922 ntBASIC5.99□□□□□ -1.45
NKX6-1P78426 CTNNA1-244ENST00000627109 3831 ntTSL 5 BASIC5.99□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 130.5 ms