Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLDN20P56880 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLDN20P56880 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.62□□□□□ -1.51
CLDN20P56880 SPRR2B-201ENST00000368755 617 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
CLDN20P56880 C1orf194-202ENST00000369945 534 ntTSL 5 BASIC5.62□□□□□ -1.51
CLDN20P56880 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.62□□□□□ -1.51
CLDN20P56880 CXADRP1-201ENST00000398098 1095 ntBASIC5.62□□□□□ -1.51
CLDN20P56880 AL445238.1-204ENST00000400311 463 ntBASIC5.62□□□□□ -1.51
CLDN20P56880 NPM1P37-201ENST00000403105 874 ntBASIC5.62□□□□□ -1.51
CLDN20P56880 RNU2-72P-201ENST00000411175 163 ntBASIC5.62□□□□□ -1.51
CLDN20P56880 AC096644.3-201ENST00000416788 338 ntBASIC5.62□□□□□ -1.51
CLDN20P56880 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC5.62□□□□□ -1.51
CLDN20P56880 CYP4F30P-202ENST00000420048 405 ntBASIC5.62□□□□□ -1.51
CLDN20P56880 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC5.62□□□□□ -1.51
CLDN20P56880 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.62□□□□□ -1.51
CLDN20P56880 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC5.62□□□□□ -1.51
CLDN20P56880 RPSAP40-201ENST00000442343 891 ntBASIC5.62□□□□□ -1.51
CLDN20P56880 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC5.62□□□□□ -1.51
CLDN20P56880 RANP2-201ENST00000456833 229 ntBASIC5.62□□□□□ -1.51
CLDN20P56880 AL022319.1-201ENST00000458183 1167 ntBASIC5.62□□□□□ -1.51
CLDN20P56880 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC5.62□□□□□ -1.51
CLDN20P56880 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.62□□□□□ -1.51
CLDN20P56880 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC5.62□□□□□ -1.51
CLDN20P56880 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC5.62□□□□□ -1.51
CLDN20P56880 AC097486.1-201ENST00000515331 210 ntBASIC5.62□□□□□ -1.51
CLDN20P56880 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.62□□□□□ -1.51
CLDN20P56880 AP001858.2-201ENST00000536213 601 ntBASIC5.62□□□□□ -1.51
CLDN20P56880 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.62□□□□□ -1.51
CLDN20P56880 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC5.62□□□□□ -1.51
CLDN20P56880 AP000619.2-201ENST00000546014 969 ntBASIC5.62□□□□□ -1.51
CLDN20P56880 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC5.62□□□□□ -1.51
CLDN20P56880 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC5.62□□□□□ -1.51
CLDN20P56880 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.62□□□□□ -1.51
CLDN20P56880 AL845552.1-201ENST00000556820 323 ntBASIC5.62□□□□□ -1.51
CLDN20P56880 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC5.62□□□□□ -1.51
CLDN20P56880 AC018767.2-201ENST00000562361 600 ntTSL 5 BASIC5.62□□□□□ -1.51
CLDN20P56880 AC010547.7-201ENST00000570323 333 ntBASIC5.62□□□□□ -1.51
CLDN20P56880 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLDN20P56880 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLDN20P56880 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC5.62□□□□□ -1.51
CLDN20P56880 AP001357.1-201ENST00000586304 1053 ntBASIC5.62□□□□□ -1.51
CLDN20P56880 AL132655.1-201ENST00000601795 1153 ntTSL 3 BASIC5.62□□□□□ -1.51
CLDN20P56880 AL049840.6-201ENST00000604583 345 ntBASIC5.62□□□□□ -1.51
CLDN20P56880 AL591167.1-201ENST00000607321 456 ntBASIC5.62□□□□□ -1.51
CLDN20P56880 AC018690.1-201ENST00000608144 626 ntBASIC5.62□□□□□ -1.51
CLDN20P56880 AC092574.1-201ENST00000609771 420 ntBASIC5.62□□□□□ -1.51
CLDN20P56880 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.62□□□□□ -1.51
CLDN20P56880 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC5.62□□□□□ -1.51
CLDN20P56880 CXADRP3-202ENST00000617265 1100 ntBASIC5.62□□□□□ -1.51
CLDN20P56880 AL162233.1-201ENST00000620014 944 ntBASIC5.62□□□□□ -1.51
CLDN20P56880 KYNUP3-201ENST00000574386 1341 ntBASIC5.62□□□□□ -1.51
CLDN20P56880 AC092451.3-201ENST00000625067 1343 ntBASIC5.62□□□□□ -1.51
CLDN20P56880 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.62□□□□□ -1.51
CLDN20P56880 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.62□□□□□ -1.51
CLDN20P56880 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLDN20P56880 SAMM50P1-201ENST00000455403 1399 ntBASIC5.62□□□□□ -1.51
CLDN20P56880 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLDN20P56880 GPR85-202ENST00000424100 2895 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLDN20P56880 AL137058.3-201ENST00000624531 3099 ntBASIC5.62□□□□□ -1.51
CLDN20P56880 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLDN20P56880 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.62□□□□□ -1.51
CLDN20P56880 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
CLDN20P56880 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
CLDN20P56880 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.62□□□□□ -1.51
CLDN20P56880 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC5.62□□□□□ -1.51
CLDN20P56880 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.61□□□□□ -1.51
CLDN20P56880 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLDN20P56880 ZNF766-201ENST00000439461 6298 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLDN20P56880 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.61□□□□□ -1.51
CLDN20P56880 OR6N2-202ENST00000641131 3455 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CLDN20P56880 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.61□□□□□ -1.51
CLDN20P56880 AC027279.1-201ENST00000568885 4284 ntBASIC5.61□□□□□ -1.51
CLDN20P56880 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.61□□□□□ -1.51
CLDN20P56880 RNA5SP110-201ENST00000362638 115 ntBASIC5.61□□□□□ -1.51
CLDN20P56880 RNU1-49P-201ENST00000363468 159 ntBASIC5.61□□□□□ -1.51
CLDN20P56880 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLDN20P56880 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
CLDN20P56880 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC5.61□□□□□ -1.51
CLDN20P56880 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
CLDN20P56880 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
CLDN20P56880 AL121977.1-201ENST00000401636 979 ntBASIC5.61□□□□□ -1.51
CLDN20P56880 VN1R12P-201ENST00000403778 876 ntBASIC5.61□□□□□ -1.51
CLDN20P56880 AL589655.1-201ENST00000405398 482 ntBASIC5.61□□□□□ -1.51
CLDN20P56880 LSM5-203ENST00000409782 649 ntTSL 5 BASIC5.61□□□□□ -1.51
CLDN20P56880 RN7SKP144-201ENST00000411108 279 ntBASIC5.61□□□□□ -1.51
CLDN20P56880 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC5.61□□□□□ -1.51
CLDN20P56880 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.61□□□□□ -1.51
CLDN20P56880 AL121885.3-201ENST00000422833 115 ntTSL 3 BASIC5.61□□□□□ -1.51
CLDN20P56880 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
CLDN20P56880 PSMD10P2-201ENST00000432890 672 ntBASIC5.61□□□□□ -1.51
CLDN20P56880 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.61□□□□□ -1.51
CLDN20P56880 PPIAP10-201ENST00000438675 458 ntBASIC5.61□□□□□ -1.51
CLDN20P56880 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC5.61□□□□□ -1.51
CLDN20P56880 RPL5P7-201ENST00000444235 813 ntBASIC5.61□□□□□ -1.51
CLDN20P56880 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC5.61□□□□□ -1.51
CLDN20P56880 OR52I1-201ENST00000450052 1050 ntBASIC5.61□□□□□ -1.51
CLDN20P56880 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
CLDN20P56880 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.61□□□□□ -1.51
CLDN20P56880 NLN-202ENST00000502464 8354 ntTSL 5 BASIC5.61□□□□□ -1.51
CLDN20P56880 ZCCHC10-203ENST00000504170 325 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 122.6 ms