Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 AC099521.1-201ENST00000482557 334 ntBASIC6.07□□□□□ -1.44
CDH4P55283 AC100801.1-201ENST00000517368 517 ntTSL 3 BASIC6.07□□□□□ -1.44
CDH4P55283 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.07□□□□□ -1.44
CDH4P55283 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.07□□□□□ -1.44
CDH4P55283 AC244502.2-201ENST00000543361 851 ntBASIC6.07□□□□□ -1.44
CDH4P55283 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.07□□□□□ -1.44
CDH4P55283 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.07□□□□□ -1.44
CDH4P55283 AC139099.1-201ENST00000573737 976 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CDH4P55283 COX6CP7-201ENST00000597056 208 ntBASIC6.07□□□□□ -1.44
CDH4P55283 AC015982.1-201ENST00000608113 465 ntBASIC6.07□□□□□ -1.44
CDH4P55283 AL355974.3-201ENST00000617383 467 ntBASIC6.07□□□□□ -1.44
CDH4P55283 5S_rRNA.28-201ENST00000638107 119 ntBASIC6.07□□□□□ -1.44
CDH4P55283 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CDH4P55283 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CDH4P55283 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.07□□□□□ -1.44
CDH4P55283 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CDH4P55283 NXPE4-202ENST00000424261 1687 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CDH4P55283 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
CDH4P55283 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.07□□□□□ -1.44
CDH4P55283 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC6.07□□□□□ -1.44
CDH4P55283 AC130304.1-201ENST00000622942 2385 ntBASIC6.07□□□□□ -1.44
CDH4P55283 PDZK1P1-202ENST00000425209 1350 ntBASIC6.06□□□□□ -1.44
CDH4P55283 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
CDH4P55283 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CDH4P55283 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CDH4P55283 FRMD7-202ENST00000370879 2864 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CDH4P55283 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
CDH4P55283 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CDH4P55283 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CDH4P55283 RBMS3-AS2-201ENST00000366321 582 ntTSL 3 BASIC6.06□□□□□ -1.44
CDH4P55283 TRGV10-201ENST00000390341 512 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
CDH4P55283 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CDH4P55283 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.06□□□□□ -1.44
CDH4P55283 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC6.06□□□□□ -1.44
CDH4P55283 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC6.06□□□□□ -1.44
CDH4P55283 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.06□□□□□ -1.44
CDH4P55283 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CDH4P55283 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC6.06□□□□□ -1.44
CDH4P55283 AC011476.1-201ENST00000466725 307 ntBASIC6.06□□□□□ -1.44
CDH4P55283 OR2A1-AS1-202ENST00000467944 422 ntBASIC6.06□□□□□ -1.44
CDH4P55283 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CDH4P55283 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC6.06□□□□□ -1.44
CDH4P55283 AC090568.1-201ENST00000509499 856 ntBASIC6.06□□□□□ -1.44
CDH4P55283 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CDH4P55283 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.06□□□□□ -1.44
CDH4P55283 LINC00861-202ENST00000517869 606 ntTSL 5 BASIC6.06□□□□□ -1.44
CDH4P55283 AP001804.1-201ENST00000526868 919 ntBASIC6.06□□□□□ -1.44
CDH4P55283 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC6.06□□□□□ -1.44
CDH4P55283 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.06□□□□□ -1.44
CDH4P55283 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
CDH4P55283 DPPA3P2-202ENST00000557188 1219 ntBASIC6.06□□□□□ -1.44
CDH4P55283 TXNP4-201ENST00000575018 310 ntBASIC6.06□□□□□ -1.44
CDH4P55283 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
CDH4P55283 MIR4310-201ENST00000582950 57 ntBASIC6.06□□□□□ -1.44
CDH4P55283 AC091151.1-201ENST00000587369 726 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CDH4P55283 AC069542.2-201ENST00000624816 216 ntBASIC6.06□□□□□ -1.44
CDH4P55283 FP236241.1-206ENST00000625005 987 ntTSL 5 BASIC6.06□□□□□ -1.44
CDH4P55283 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC6.06□□□□□ -1.44
CDH4P55283 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CDH4P55283 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CDH4P55283 DCX-211ENST00000637570 6162 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
CDH4P55283 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CDH4P55283 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CDH4P55283 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CDH4P55283 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CDH4P55283 ERI2-206ENST00000563117 2903 ntTSL 2 BASIC6.05□□□□□ -1.44
CDH4P55283 AC093297.3-201ENST00000607056 2517 ntBASIC6.05□□□□□ -1.44
CDH4P55283 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
CDH4P55283 VCAM1-201ENST00000294728 3083 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CDH4P55283 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CDH4P55283 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
CDH4P55283 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC6.05□□□□□ -1.44
CDH4P55283 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CDH4P55283 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
CDH4P55283 SNORD1C-201ENST00000363315 78 ntBASIC6.05□□□□□ -1.44
CDH4P55283 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.05□□□□□ -1.44
CDH4P55283 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
CDH4P55283 AL096800.1-201ENST00000405326 893 ntBASIC6.05□□□□□ -1.44
CDH4P55283 RPS3P2-201ENST00000421346 701 ntBASIC6.05□□□□□ -1.44
CDH4P55283 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.05□□□□□ -1.44
CDH4P55283 BX323845.3-201ENST00000428215 527 ntBASIC6.05□□□□□ -1.44
CDH4P55283 AL365220.1-201ENST00000432923 399 ntBASIC6.05□□□□□ -1.44
CDH4P55283 RPS12P17-201ENST00000438591 377 ntBASIC6.05□□□□□ -1.44
CDH4P55283 RPL12P11-201ENST00000439970 501 ntBASIC6.05□□□□□ -1.44
CDH4P55283 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.05□□□□□ -1.44
CDH4P55283 SLC25A51P1-201ENST00000468432 871 ntBASIC6.05□□□□□ -1.44
CDH4P55283 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
CDH4P55283 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.05□□□□□ -1.44
CDH4P55283 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.05□□□□□ -1.44
CDH4P55283 AC079950.1-201ENST00000551229 568 ntTSL 4 BASIC6.05□□□□□ -1.44
CDH4P55283 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.05□□□□□ -1.44
CDH4P55283 AC091078.2-201ENST00000557145 559 ntBASIC6.05□□□□□ -1.44
CDH4P55283 ZNF322P1-201ENST00000568013 1209 ntBASIC6.05□□□□□ -1.44
CDH4P55283 GARSP1-201ENST00000570895 719 ntBASIC6.05□□□□□ -1.44
CDH4P55283 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC6.05□□□□□ -1.44
CDH4P55283 AC008395.1-201ENST00000601752 607 ntTSL 5 BASIC6.05□□□□□ -1.44
CDH4P55283 AC100767.2-201ENST00000604840 693 ntBASIC6.05□□□□□ -1.44
CDH4P55283 FAM27E4-201ENST00000605259 342 ntBASIC6.05□□□□□ -1.44
CDH4P55283 AP001962.1-201ENST00000624114 559 ntBASIC6.05□□□□□ -1.44
CDH4P55283 OR8G3P-202ENST00000641572 1255 ntBASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 87.5 ms