Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 AC083906.1-201ENST00000509298 406 ntBASIC6.51□□□□□ -1.37
COPAP53621 SNX18P25-201ENST00000510539 758 ntBASIC6.51□□□□□ -1.37
COPAP53621 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC6.51□□□□□ -1.37
COPAP53621 LINC01218-201ENST00000515150 481 ntTSL 3 BASIC6.51□□□□□ -1.37
COPAP53621 OR4A6P-201ENST00000534364 970 ntBASIC6.51□□□□□ -1.37
COPAP53621 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC6.51□□□□□ -1.37
COPAP53621 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.51□□□□□ -1.37
COPAP53621 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.51□□□□□ -1.37
COPAP53621 AC010325.1-202ENST00000562076 279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
COPAP53621 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.51□□□□□ -1.37
COPAP53621 AL671309.1-201ENST00000603750 544 ntBASIC6.51□□□□□ -1.37
COPAP53621 BNIP3P19-201ENST00000605397 577 ntBASIC6.51□□□□□ -1.37
COPAP53621 PPATP2-201ENST00000605635 508 ntBASIC6.51□□□□□ -1.37
COPAP53621 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC6.51□□□□□ -1.37
COPAP53621 AL137246.2-201ENST00000613439 662 ntBASIC6.51□□□□□ -1.37
COPAP53621 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.51□□□□□ -1.37
COPAP53621 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.51□□□□□ -1.37
COPAP53621 LINC00598-209ENST00000635966 1148 ntTSL 5 BASIC6.51□□□□□ -1.37
COPAP53621 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.51□□□□□ -1.37
COPAP53621 AC104966.1-201ENST00000467010 1464 ntBASIC6.51□□□□□ -1.37
COPAP53621 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC6.51□□□□□ -1.37
COPAP53621 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
COPAP53621 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
COPAP53621 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.51□□□□□ -1.37
COPAP53621 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC6.5□□□□□ -1.37
COPAP53621 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC6.5□□□□□ -1.37
COPAP53621 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.5□□□□□ -1.37
COPAP53621 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
COPAP53621 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COPAP53621 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
COPAP53621 GDNF-AS1-202ENST00000510986 1941 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COPAP53621 SEC61A2-202ENST00000304267 2030 ntTSL 2 BASIC6.5□□□□□ -1.37
COPAP53621 FSCB-201ENST00000340446 2938 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
COPAP53621 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COPAP53621 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.5□□□□□ -1.37
COPAP53621 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.5□□□□□ -1.37
COPAP53621 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.5□□□□□ -1.37
COPAP53621 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COPAP53621 CASC19-238ENST00000641523 1558 ntBASIC6.5□□□□□ -1.37
COPAP53621 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC6.5□□□□□ -1.37
COPAP53621 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
COPAP53621 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.5□□□□□ -1.37
COPAP53621 RPA3-204ENST00000406109 434 ntTSL 3 BASIC6.5□□□□□ -1.37
COPAP53621 SNORA77.2-201ENST00000408571 112 ntBASIC6.5□□□□□ -1.37
COPAP53621 AC116036.1-201ENST00000412199 367 ntBASIC6.5□□□□□ -1.37
COPAP53621 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC6.5□□□□□ -1.37
COPAP53621 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC6.5□□□□□ -1.37
COPAP53621 Z68868.1-201ENST00000429048 544 ntBASIC6.5□□□□□ -1.37
COPAP53621 AC023141.6-201ENST00000429418 337 ntBASIC6.5□□□□□ -1.37
COPAP53621 AC094019.1-201ENST00000434678 472 ntBASIC6.5□□□□□ -1.37
COPAP53621 AC110602.1-201ENST00000437414 318 ntBASIC6.5□□□□□ -1.37
COPAP53621 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.5□□□□□ -1.37
COPAP53621 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC6.5□□□□□ -1.37
COPAP53621 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.5□□□□□ -1.37
COPAP53621 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC6.5□□□□□ -1.37
COPAP53621 AC016724.1-201ENST00000453215 421 ntBASIC6.5□□□□□ -1.37
COPAP53621 AP000547.1-201ENST00000454360 617 ntBASIC6.5□□□□□ -1.37
COPAP53621 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC6.5□□□□□ -1.37
COPAP53621 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC6.5□□□□□ -1.37
COPAP53621 NDUFA5P5-201ENST00000468361 342 ntBASIC6.5□□□□□ -1.37
COPAP53621 AADACP1-204ENST00000483636 1285 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COPAP53621 AC069439.2-201ENST00000496403 789 ntTSL 2 BASIC6.5□□□□□ -1.37
COPAP53621 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COPAP53621 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.5□□□□□ -1.37
COPAP53621 AC108157.1-201ENST00000510511 539 ntBASIC6.5□□□□□ -1.37
COPAP53621 AC036111.2-201ENST00000533247 901 ntBASIC6.5□□□□□ -1.37
COPAP53621 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC6.5□□□□□ -1.37
COPAP53621 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.5□□□□□ -1.37
COPAP53621 TPRX1P1-201ENST00000557620 319 ntBASIC6.5□□□□□ -1.37
COPAP53621 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.5□□□□□ -1.37
COPAP53621 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC6.5□□□□□ -1.37
COPAP53621 AC040977.1-201ENST00000573222 343 ntTSL 3 BASIC6.5□□□□□ -1.37
COPAP53621 BNIP3P39-201ENST00000601077 554 ntBASIC6.5□□□□□ -1.37
COPAP53621 OR8G7P-201ENST00000616658 848 ntBASIC6.5□□□□□ -1.37
COPAP53621 AP001264.1-201ENST00000620602 703 ntBASIC6.5□□□□□ -1.37
COPAP53621 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COPAP53621 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.5□□□□□ -1.37
COPAP53621 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COPAP53621 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COPAP53621 LINC01224-203ENST00000596283 2766 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COPAP53621 BIN2P1-201ENST00000504996 1530 ntBASIC6.5□□□□□ -1.37
COPAP53621 OPRM1-206ENST00000419506 1402 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
COPAP53621 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.5□□□□□ -1.37
COPAP53621 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
COPAP53621 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC6.5□□□□□ -1.37
COPAP53621 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC6.5□□□□□ -1.37
COPAP53621 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
COPAP53621 P2RY14-202ENST00000424796 1780 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
COPAP53621 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COPAP53621 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
COPAP53621 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
COPAP53621 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
COPAP53621 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COPAP53621 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COPAP53621 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
COPAP53621 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
COPAP53621 CLPS-201ENST00000259938 526 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COPAP53621 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
COPAP53621 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC6.49□□□□□ -1.37
COPAP53621 MIR365B-201ENST00000362317 111 ntBASIC6.49□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms