Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 NXF3-201ENST00000395065 1938 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HCFC1P51610 AC096921.2-201ENST00000561507 1916 ntBASIC5.2□□□□□ -1.58
HCFC1P51610 RASSF9-201ENST00000361228 5682 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HCFC1P51610 YES1-203ENST00000577961 4554 ntTSL 5 BASIC5.2□□□□□ -1.58
HCFC1P51610 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
HCFC1P51610 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.19□□□□□ -1.58
HCFC1P51610 AP002004.1-201ENST00000532510 3530 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HCFC1P51610 AC073365.1-203ENST00000641055 1992 ntBASIC5.19□□□□□ -1.58
HCFC1P51610 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC5.19□□□□□ -1.58
HCFC1P51610 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HCFC1P51610 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
HCFC1P51610 OR2W4P-201ENST00000406496 926 ntBASIC5.19□□□□□ -1.58
HCFC1P51610 AC004882.2-201ENST00000420180 244 ntTSL 5 BASIC5.19□□□□□ -1.58
HCFC1P51610 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HCFC1P51610 AL139415.1-201ENST00000424862 352 ntBASIC5.19□□□□□ -1.58
HCFC1P51610 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC5.19□□□□□ -1.58
HCFC1P51610 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.19□□□□□ -1.58
HCFC1P51610 AL390119.1-201ENST00000440329 312 ntBASIC5.19□□□□□ -1.58
HCFC1P51610 LRRC37A14P-201ENST00000452297 462 ntBASIC5.19□□□□□ -1.58
HCFC1P51610 AC114728.1-201ENST00000488289 483 ntBASIC5.19□□□□□ -1.58
HCFC1P51610 RN7SL57P-201ENST00000493687 290 ntBASIC5.19□□□□□ -1.58
HCFC1P51610 AC074087.1-201ENST00000512059 724 ntBASIC5.19□□□□□ -1.58
HCFC1P51610 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.19□□□□□ -1.58
HCFC1P51610 RNA5SP92-201ENST00000516437 110 ntBASIC5.19□□□□□ -1.58
HCFC1P51610 SNORA43.3-201ENST00000517240 103 ntBASIC5.19□□□□□ -1.58
HCFC1P51610 AC027026.1-201ENST00000532323 742 ntBASIC5.19□□□□□ -1.58
HCFC1P51610 LINC01580-201ENST00000555255 561 ntTSL 4 BASIC5.19□□□□□ -1.58
HCFC1P51610 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.19□□□□□ -1.58
HCFC1P51610 AC092944.2-201ENST00000605443 889 ntBASIC5.19□□□□□ -1.58
HCFC1P51610 AL021918.2-201ENST00000613415 194 ntBASIC5.19□□□□□ -1.58
HCFC1P51610 AC068870.2-201ENST00000620635 389 ntBASIC5.19□□□□□ -1.58
HCFC1P51610 AC004808.2-201ENST00000627965 773 ntBASIC5.19□□□□□ -1.58
HCFC1P51610 AL596275.2-208ENST00000641192 594 ntBASIC5.19□□□□□ -1.58
HCFC1P51610 N4BP2-201ENST00000261435 9744 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
HCFC1P51610 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
HCFC1P51610 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HCFC1P51610 TBC1D32-204ENST00000398212 3824 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
HCFC1P51610 NDST4-204ENST00000613194 3439 ntTSL 5 BASIC5.19□□□□□ -1.58
HCFC1P51610 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC5.19□□□□□ -1.58
HCFC1P51610 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC5.19□□□□□ -1.58
HCFC1P51610 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC5.19□□□□□ -1.58
HCFC1P51610 ZNF311-203ENST00000377179 2730 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
HCFC1P51610 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HCFC1P51610 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HCFC1P51610 MYO3B-203ENST00000409044 5448 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
HCFC1P51610 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
HCFC1P51610 GRIK2-206ENST00000413795 4876 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HCFC1P51610 ABLIM1-207ENST00000392955 7408 ntTSL 5 BASIC5.19□□□□□ -1.58
HCFC1P51610 U3.2-201ENST00000362981 210 ntBASIC5.19□□□□□ -1.58
HCFC1P51610 RN7SKP166-201ENST00000410812 305 ntBASIC5.19□□□□□ -1.58
HCFC1P51610 RPL35AP24-201ENST00000413846 330 ntBASIC5.19□□□□□ -1.58
HCFC1P51610 AC007568.1-201ENST00000422912 471 ntBASIC5.19□□□□□ -1.58
HCFC1P51610 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC5.19□□□□□ -1.58
HCFC1P51610 AL022331.1-201ENST00000429025 477 ntBASIC5.19□□□□□ -1.58
HCFC1P51610 AL139231.1-201ENST00000431001 312 ntTSL 3 BASIC5.19□□□□□ -1.58
HCFC1P51610 AC092967.1-201ENST00000449016 481 ntBASIC5.19□□□□□ -1.58
HCFC1P51610 AL022319.1-201ENST00000458183 1167 ntBASIC5.19□□□□□ -1.58
HCFC1P51610 AC104164.1-201ENST00000460282 590 ntBASIC5.19□□□□□ -1.58
HCFC1P51610 AL133445.1-201ENST00000467051 452 ntBASIC5.19□□□□□ -1.58
HCFC1P51610 AC008410.1-201ENST00000483777 339 ntBASIC5.19□□□□□ -1.58
HCFC1P51610 RPL32P9-201ENST00000487963 407 ntBASIC5.19□□□□□ -1.58
HCFC1P51610 AC108693.1-201ENST00000496068 432 ntBASIC5.19□□□□□ -1.58
HCFC1P51610 AC008629.2-201ENST00000503783 483 ntBASIC5.19□□□□□ -1.58
HCFC1P51610 AC109481.1-201ENST00000509173 282 ntBASIC5.19□□□□□ -1.58
HCFC1P51610 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.19□□□□□ -1.58
HCFC1P51610 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
HCFC1P51610 MIR1273E-201ENST00000581165 102 ntBASIC5.19□□□□□ -1.58
HCFC1P51610 AC087821.1-201ENST00000623639 567 ntBASIC5.19□□□□□ -1.58
HCFC1P51610 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.19□□□□□ -1.58
HCFC1P51610 AC022726.2-201ENST00000634673 547 ntBASIC5.19□□□□□ -1.58
HCFC1P51610 CLCC1-205ENST00000369969 4343 ntTSL 5 BASIC5.19□□□□□ -1.58
HCFC1P51610 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.19□□□□□ -1.58
HCFC1P51610 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
HCFC1P51610 MTCO1P46-201ENST00000451639 1491 ntBASIC5.19□□□□□ -1.58
HCFC1P51610 DNM1L-201ENST00000266481 3101 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HCFC1P51610 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.19□□□□□ -1.58
HCFC1P51610 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
HCFC1P51610 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
HCFC1P51610 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
HCFC1P51610 CASC19-248ENST00000641674 1356 ntBASIC5.18□□□□□ -1.58
HCFC1P51610 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
HCFC1P51610 CD200R1L-204ENST00000488794 1597 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
HCFC1P51610 AC005725.1-201ENST00000577346 2607 ntBASIC5.18□□□□□ -1.58
HCFC1P51610 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
HCFC1P51610 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
HCFC1P51610 LINC01470-202ENST00000506723 2193 ntTSL 2 BASIC5.18□□□□□ -1.58
HCFC1P51610 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.18□□□□□ -1.58
HCFC1P51610 SNRPEP6-201ENST00000407465 277 ntBASIC5.18□□□□□ -1.58
HCFC1P51610 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.18□□□□□ -1.58
HCFC1P51610 RN7SKP29-201ENST00000410957 272 ntBASIC5.18□□□□□ -1.58
HCFC1P51610 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC5.18□□□□□ -1.58
HCFC1P51610 RPS15AP30-201ENST00000420976 390 ntBASIC5.18□□□□□ -1.58
HCFC1P51610 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC5.18□□□□□ -1.58
HCFC1P51610 LINC01593-201ENST00000424355 388 ntTSL 5 BASIC5.18□□□□□ -1.58
HCFC1P51610 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
HCFC1P51610 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC5.18□□□□□ -1.58
HCFC1P51610 RN7SL222P-201ENST00000476452 299 ntBASIC5.18□□□□□ -1.58
HCFC1P51610 RPL5P12-201ENST00000477071 851 ntBASIC5.18□□□□□ -1.58
HCFC1P51610 C21orf62-202ENST00000479548 964 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
HCFC1P51610 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms