Protein–RNA interactions for Protein: P51532

SMARCA4, Transcription activator BRG1, humanhuman

Predictions only

Length 1,647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4P51532 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SMARCA4P51532 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
SMARCA4P51532 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC10.09□□□□□ -0.79
SMARCA4P51532 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
SMARCA4P51532 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC10.09□□□□□ -0.79
SMARCA4P51532 ATP2B4-201ENST00000341360 4658 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SMARCA4P51532 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC10.09□□□□□ -0.79
SMARCA4P51532 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC10.09□□□□□ -0.79
SMARCA4P51532 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
SMARCA4P51532 FREM1-202ENST00000380880 7324 ntAPPRIS P1 TSL 5 BASIC10.09□□□□□ -0.79
SMARCA4P51532 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC10.09□□□□□ -0.79
SMARCA4P51532 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
SMARCA4P51532 AC011493.1-201ENST00000596753 1632 ntBASIC10.08□□□□□ -0.8
SMARCA4P51532 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
SMARCA4P51532 RNU4-4P-201ENST00000364588 130 ntBASIC10.08□□□□□ -0.8
SMARCA4P51532 SNORA67-201ENST00000384423 137 ntBASIC10.08□□□□□ -0.8
SMARCA4P51532 RNU1-149P-201ENST00000390870 161 ntBASIC10.08□□□□□ -0.8
SMARCA4P51532 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC10.08□□□□□ -0.8
SMARCA4P51532 NOP10-202ENST00000557912 436 ntTSL 2 BASIC10.08□□□□□ -0.8
SMARCA4P51532 AP001011.1-202ENST00000581172 667 ntTSL 3 BASIC10.08□□□□□ -0.8
SMARCA4P51532 AC091193.1-201ENST00000604640 448 ntBASIC10.08□□□□□ -0.8
SMARCA4P51532 MIR378J-201ENST00000611988 109 ntBASIC10.08□□□□□ -0.8
SMARCA4P51532 WWOX-217ENST00000620008 450 ntTSL 2 BASIC10.08□□□□□ -0.8
SMARCA4P51532 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SMARCA4P51532 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC10.08□□□□□ -0.8
SMARCA4P51532 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SMARCA4P51532 AC114947.2-201ENST00000565748 2125 ntBASIC10.08□□□□□ -0.8
SMARCA4P51532 ZBTB21-204ENST00000398505 6846 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
SMARCA4P51532 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC10.08□□□□□ -0.8
SMARCA4P51532 TGIF1-204ENST00000400167 1352 ntTSL 3 BASIC10.08□□□□□ -0.8
SMARCA4P51532 AL360271.1-201ENST00000395679 510 ntBASIC10.07□□□□□ -0.8
SMARCA4P51532 CYB5AP4-201ENST00000396692 399 ntBASIC10.07□□□□□ -0.8
SMARCA4P51532 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SMARCA4P51532 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC10.07□□□□□ -0.8
SMARCA4P51532 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC10.07□□□□□ -0.8
SMARCA4P51532 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC10.07□□□□□ -0.8
SMARCA4P51532 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
SMARCA4P51532 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC10.07□□□□□ -0.8
SMARCA4P51532 MIR4480-201ENST00000582492 71 ntBASIC10.07□□□□□ -0.8
SMARCA4P51532 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC10.07□□□□□ -0.8
SMARCA4P51532 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC10.07□□□□□ -0.8
SMARCA4P51532 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC10.07□□□□□ -0.8
SMARCA4P51532 WBP1LP8-201ENST00000617401 327 ntBASIC10.07□□□□□ -0.8
SMARCA4P51532 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SMARCA4P51532 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SMARCA4P51532 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
SMARCA4P51532 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
SMARCA4P51532 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC10.07□□□□□ -0.8
SMARCA4P51532 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SMARCA4P51532 ZNF733P-202ENST00000444809 1573 ntBASIC10.07□□□□□ -0.8
SMARCA4P51532 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC10.07□□□□□ -0.8
SMARCA4P51532 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC10.07□□□□□ -0.8
SMARCA4P51532 HNRNPA3P4-201ENST00000427514 803 ntBASIC10.07□□□□□ -0.8
SMARCA4P51532 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC10.07□□□□□ -0.8
SMARCA4P51532 AL392089.1-202ENST00000444793 449 ntTSL 2 BASIC10.07□□□□□ -0.8
SMARCA4P51532 LINC00483-203ENST00000450727 686 ntTSL 3 BASIC10.07□□□□□ -0.8
SMARCA4P51532 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC10.07□□□□□ -0.8
SMARCA4P51532 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC10.07□□□□□ -0.8
SMARCA4P51532 CLMN-206ENST00000556441 452 ntTSL 5 BASIC10.07□□□□□ -0.8
SMARCA4P51532 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC10.07□□□□□ -0.8
SMARCA4P51532 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC10.07□□□□□ -0.8
SMARCA4P51532 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC10.07□□□□□ -0.8
SMARCA4P51532 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC10.07□□□□□ -0.8
SMARCA4P51532 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC10.07□□□□□ -0.8
SMARCA4P51532 AC090607.5-201ENST00000615692 224 ntBASIC10.07□□□□□ -0.8
SMARCA4P51532 AC130448.2-201ENST00000624082 374 ntBASIC10.07□□□□□ -0.8
SMARCA4P51532 FRYL-210ENST00000507711 5277 ntTSL 2 BASIC10.07□□□□□ -0.8
SMARCA4P51532 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SMARCA4P51532 CLASP1-215ENST00000541377 7909 ntTSL 5 BASIC10.07□□□□□ -0.8
SMARCA4P51532 TMEM246-203ENST00000374851 5070 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
SMARCA4P51532 LNPEP-201ENST00000231368 12752 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SMARCA4P51532 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
SMARCA4P51532 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SMARCA4P51532 LINC02047-201ENST00000494761 1371 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SMARCA4P51532 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC10.06□□□□□ -0.8
SMARCA4P51532 ERG-202ENST00000398897 4651 ntTSL 5 BASIC10.06□□□□□ -0.8
SMARCA4P51532 PWAR1-201ENST00000624188 2414 ntBASIC10.06□□□□□ -0.8
SMARCA4P51532 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC10.06□□□□□ -0.8
SMARCA4P51532 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC10.06□□□□□ -0.8
SMARCA4P51532 UGDH-205ENST00000506179 3021 ntAPPRIS P1 TSL 5 BASIC10.06□□□□□ -0.8
SMARCA4P51532 AL391262.1-201ENST00000556558 1992 ntBASIC10.06□□□□□ -0.8
SMARCA4P51532 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SMARCA4P51532 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SMARCA4P51532 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC10.06□□□□□ -0.8
SMARCA4P51532 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC10.06□□□□□ -0.8
SMARCA4P51532 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC10.06□□□□□ -0.8
SMARCA4P51532 RNU1-88P-201ENST00000459274 128 ntBASIC10.06□□□□□ -0.8
SMARCA4P51532 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC10.06□□□□□ -0.8
SMARCA4P51532 AC018552.1-201ENST00000562099 811 ntBASIC10.06□□□□□ -0.8
SMARCA4P51532 TTN-AS1-222ENST00000587576 399 ntTSL 3 BASIC10.06□□□□□ -0.8
SMARCA4P51532 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC10.06□□□□□ -0.8
SMARCA4P51532 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC10.06□□□□□ -0.8
SMARCA4P51532 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC10.06□□□□□ -0.8
SMARCA4P51532 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SMARCA4P51532 ATOX1-203ENST00000521264 4341 ntTSL 2 BASIC10.06□□□□□ -0.8
SMARCA4P51532 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC10.06□□□□□ -0.8
SMARCA4P51532 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SMARCA4P51532 MIPOL1-201ENST00000327441 7185 ntAPPRIS P1 TSL 1 (best) BASIC10.06□□□□□ -0.8
SMARCA4P51532 CEP128-202ENST00000281129 4461 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
SMARCA4P51532 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms