Protein–RNA interactions for Protein: P35221

CTNNA1, Catenin alpha-1, humanhuman

Known RBP Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1P35221 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC6.32□□□□□ -1.4
CTNNA1P35221 AC004076.2-201ENST00000620532 3323 ntBASIC6.32□□□□□ -1.4
CTNNA1P35221 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CTNNA1P35221 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.32□□□□□ -1.4
CTNNA1P35221 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CTNNA1P35221 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
CTNNA1P35221 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CTNNA1P35221 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.32□□□□□ -1.4
CTNNA1P35221 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.32□□□□□ -1.4
CTNNA1P35221 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC6.32□□□□□ -1.4
CTNNA1P35221 AF127577.4-201ENST00000432230 5929 ntTSL 5 BASIC6.32□□□□□ -1.4
CTNNA1P35221 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
CTNNA1P35221 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CTNNA1P35221 NBPF20-205ENST00000622803 3689 ntTSL 5 BASIC6.31□□□□□ -1.4
CTNNA1P35221 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CTNNA1P35221 AC130304.1-201ENST00000622942 2385 ntBASIC6.31□□□□□ -1.4
CTNNA1P35221 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CTNNA1P35221 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CTNNA1P35221 CEACAM1-213ENST00000599389 1342 ntTSL 5 BASIC6.31□□□□□ -1.4
CTNNA1P35221 AC092451.3-201ENST00000625067 1343 ntBASIC6.31□□□□□ -1.4
CTNNA1P35221 AC126755.2-201ENST00000545114 1522 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CTNNA1P35221 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CTNNA1P35221 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CTNNA1P35221 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.31□□□□□ -1.4
CTNNA1P35221 AC119674.1-202ENST00000641333 1860 ntBASIC6.31□□□□□ -1.4
CTNNA1P35221 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC6.31□□□□□ -1.4
CTNNA1P35221 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.31□□□□□ -1.4
CTNNA1P35221 OR5B21-201ENST00000360374 931 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CTNNA1P35221 AL139805.1-201ENST00000407837 289 ntBASIC6.31□□□□□ -1.4
CTNNA1P35221 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC6.31□□□□□ -1.4
CTNNA1P35221 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.31□□□□□ -1.4
CTNNA1P35221 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.31□□□□□ -1.4
CTNNA1P35221 AL645936.1-201ENST00000441979 518 ntBASIC6.31□□□□□ -1.4
CTNNA1P35221 AL590004.3-202ENST00000445883 451 ntBASIC6.31□□□□□ -1.4
CTNNA1P35221 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC6.31□□□□□ -1.4
CTNNA1P35221 SEPT7P3-201ENST00000455017 621 ntBASIC6.31□□□□□ -1.4
CTNNA1P35221 ACA64.4-201ENST00000459070 127 ntBASIC6.31□□□□□ -1.4
CTNNA1P35221 RPS4XP17-201ENST00000479057 754 ntBASIC6.31□□□□□ -1.4
CTNNA1P35221 AC117500.1-201ENST00000497352 755 ntBASIC6.31□□□□□ -1.4
CTNNA1P35221 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.31□□□□□ -1.4
CTNNA1P35221 IGKV1OR22-1-201ENST00000521497 360 ntBASIC6.31□□□□□ -1.4
CTNNA1P35221 AC027026.1-201ENST00000532323 742 ntBASIC6.31□□□□□ -1.4
CTNNA1P35221 AC036111.2-201ENST00000533247 901 ntBASIC6.31□□□□□ -1.4
CTNNA1P35221 BICD1-206ENST00000551086 423 ntTSL 3 BASIC6.31□□□□□ -1.4
CTNNA1P35221 AC005632.2-201ENST00000564271 828 ntBASIC6.31□□□□□ -1.4
CTNNA1P35221 LCMT1-AS1-204ENST00000569920 474 ntTSL 2 BASIC6.31□□□□□ -1.4
CTNNA1P35221 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.31□□□□□ -1.4
CTNNA1P35221 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.31□□□□□ -1.4
CTNNA1P35221 AC002429.2-202ENST00000637269 394 ntAPPRIS P1 TSL 3 BASIC6.31□□□□□ -1.4
CTNNA1P35221 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CTNNA1P35221 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
CTNNA1P35221 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CTNNA1P35221 INPP4B-214ENST00000508116 3165 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CTNNA1P35221 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.31□□□□□ -1.4
CTNNA1P35221 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
CTNNA1P35221 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC6.31□□□□□ -1.4
CTNNA1P35221 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CTNNA1P35221 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
CTNNA1P35221 OR7C1-203ENST00000641666 11711 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CTNNA1P35221 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CTNNA1P35221 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CTNNA1P35221 PIH1D3-203ENST00000535523 1926 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
CTNNA1P35221 DCDC1-207ENST00000452803 1706 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CTNNA1P35221 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CTNNA1P35221 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
CTNNA1P35221 LINC01613-201ENST00000561476 2780 ntBASIC6.3□□□□□ -1.4
CTNNA1P35221 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
CTNNA1P35221 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.3□□□□□ -1.4
CTNNA1P35221 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
CTNNA1P35221 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CTNNA1P35221 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CTNNA1P35221 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.3□□□□□ -1.4
CTNNA1P35221 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CTNNA1P35221 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CTNNA1P35221 OR10R3P-201ENST00000361688 942 ntBASIC6.3□□□□□ -1.4
CTNNA1P35221 RN7SKP128-201ENST00000364270 303 ntBASIC6.3□□□□□ -1.4
CTNNA1P35221 RN7SKP186-201ENST00000365371 303 ntBASIC6.3□□□□□ -1.4
CTNNA1P35221 AL353625.1-202ENST00000366273 571 ntBASIC6.3□□□□□ -1.4
CTNNA1P35221 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CTNNA1P35221 MIR137-201ENST00000385223 102 ntBASIC6.3□□□□□ -1.4
CTNNA1P35221 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
CTNNA1P35221 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CTNNA1P35221 RNA5SP156-201ENST00000410250 110 ntBASIC6.3□□□□□ -1.4
CTNNA1P35221 AL096829.1-201ENST00000413677 457 ntBASIC6.3□□□□□ -1.4
CTNNA1P35221 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC6.3□□□□□ -1.4
CTNNA1P35221 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC6.3□□□□□ -1.4
CTNNA1P35221 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC6.3□□□□□ -1.4
CTNNA1P35221 RPL5P2-201ENST00000429598 854 ntBASIC6.3□□□□□ -1.4
CTNNA1P35221 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CTNNA1P35221 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC6.3□□□□□ -1.4
CTNNA1P35221 RBMY2HP-201ENST00000457961 720 ntBASIC6.3□□□□□ -1.4
CTNNA1P35221 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC6.3□□□□□ -1.4
CTNNA1P35221 LINC01093-201ENST00000506479 634 ntTSL 3 BASIC6.3□□□□□ -1.4
CTNNA1P35221 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.3□□□□□ -1.4
CTNNA1P35221 RN7SKP288-201ENST00000516227 268 ntBASIC6.3□□□□□ -1.4
CTNNA1P35221 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.3□□□□□ -1.4
CTNNA1P35221 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.3□□□□□ -1.4
CTNNA1P35221 LRTOMT-218ENST00000541614 726 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CTNNA1P35221 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.3□□□□□ -1.4
CTNNA1P35221 AC040918.1-201ENST00000560056 632 ntTSL 2 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms