Protein–RNA interactions for Protein: P28827

PTPRM, Receptor-type tyrosine-protein phosphatase mu, humanhuman

Predictions only

Length 1,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRMP28827 RN7SL447P-201ENST00000494711 245 ntBASIC8.45□□□□□ -1.06
PTPRMP28827 AC139365.2-201ENST00000517972 253 ntBASIC8.45□□□□□ -1.06
PTPRMP28827 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC8.45□□□□□ -1.06
PTPRMP28827 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC8.45□□□□□ -1.06
PTPRMP28827 AC003992.1-201ENST00000635364 557 ntBASIC8.45□□□□□ -1.06
PTPRMP28827 WISP3-211ENST00000639360 1026 ntTSL 5 BASIC8.45□□□□□ -1.06
PTPRMP28827 ST6GAL1-211ENST00000448044 4302 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PTPRMP28827 NLRP3P1-201ENST00000622303 1785 ntBASIC8.44□□□□□ -1.06
PTPRMP28827 ONECUT2-202ENST00000491143 16121 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PTPRMP28827 SECISBP2L-209ENST00000559471 7176 ntAPPRIS ALT2 TSL 1 (best) BASIC8.44□□□□□ -1.06
PTPRMP28827 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PTPRMP28827 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PTPRMP28827 NPL-201ENST00000258317 2461 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PTPRMP28827 LRRC37A2-201ENST00000333412 5177 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PTPRMP28827 ARHGEF12-201ENST00000356641 6891 ntTSL 5 BASIC8.44□□□□□ -1.06
PTPRMP28827 AL359091.1-201ENST00000449048 1734 ntBASIC8.44□□□□□ -1.06
PTPRMP28827 ZNF407-202ENST00000309902 5595 ntTSL 2 BASIC8.44□□□□□ -1.06
PTPRMP28827 HSD17B13-201ENST00000302219 2269 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PTPRMP28827 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PTPRMP28827 ZNF549-204ENST00000602149 5505 ntTSL 1 (best) BASIC8.44□□□□□ -1.06
PTPRMP28827 PARP4P1-201ENST00000435945 2337 ntBASIC8.44□□□□□ -1.06
PTPRMP28827 RNA5SP30-201ENST00000365552 115 ntBASIC8.44□□□□□ -1.06
PTPRMP28827 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC8.44□□□□□ -1.06
PTPRMP28827 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC8.44□□□□□ -1.06
PTPRMP28827 RPL31P44-201ENST00000447680 377 ntBASIC8.44□□□□□ -1.06
PTPRMP28827 AC008655.2-201ENST00000597049 304 ntTSL 4 BASIC8.44□□□□□ -1.06
PTPRMP28827 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC8.44□□□□□ -1.06
PTPRMP28827 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC8.44□□□□□ -1.06
PTPRMP28827 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PTPRMP28827 CARF-202ENST00000402905 5938 ntAPPRIS P1 TSL 1 (best) BASIC8.44□□□□□ -1.06
PTPRMP28827 DOCK2-211ENST00000520908 4654 ntTSL 2 BASIC8.44□□□□□ -1.06
PTPRMP28827 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC8.43□□□□□ -1.06
PTPRMP28827 VCAN-208ENST00000512590 5923 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
PTPRMP28827 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
PTPRMP28827 SECISBP2L-201ENST00000261847 6779 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
PTPRMP28827 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
PTPRMP28827 KIAA1217-204ENST00000376454 7381 ntAPPRIS P3 TSL 1 (best) BASIC8.43□□□□□ -1.06
PTPRMP28827 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC8.43□□□□□ -1.06
PTPRMP28827 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC8.43□□□□□ -1.06
PTPRMP28827 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
PTPRMP28827 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
PTPRMP28827 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC8.43□□□□□ -1.06
PTPRMP28827 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC8.43□□□□□ -1.06
PTPRMP28827 AC110716.2-201ENST00000563865 3945 ntBASIC8.43□□□□□ -1.06
PTPRMP28827 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC8.43□□□□□ -1.06
PTPRMP28827 CTNND1-207ENST00000426142 5800 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
PTPRMP28827 SMARCA2-252ENST00000636559 6853 ntTSL 2 BASIC8.43□□□□□ -1.06
PTPRMP28827 RNA5SP479-201ENST00000364858 117 ntBASIC8.43□□□□□ -1.06
PTPRMP28827 TSACC-201ENST00000368251 438 ntAPPRIS P1 TSL 3 BASIC8.43□□□□□ -1.06
PTPRMP28827 DEFB113-201ENST00000398718 249 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
PTPRMP28827 RNA5SP487-201ENST00000410186 122 ntBASIC8.43□□□□□ -1.06
PTPRMP28827 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC8.43□□□□□ -1.06
PTPRMP28827 AC007064.3-201ENST00000422608 359 ntBASIC8.43□□□□□ -1.06
PTPRMP28827 TEX41-205ENST00000431734 529 ntTSL 4 BASIC8.43□□□□□ -1.06
PTPRMP28827 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC8.43□□□□□ -1.06
PTPRMP28827 AC004129.2-201ENST00000457229 287 ntBASIC8.43□□□□□ -1.06
PTPRMP28827 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC8.43□□□□□ -1.06
PTPRMP28827 IGHV1-14-201ENST00000523391 241 ntBASIC8.43□□□□□ -1.06
PTPRMP28827 KCTD9P4-201ENST00000526766 1166 ntBASIC8.43□□□□□ -1.06
PTPRMP28827 HSPE1P2-201ENST00000554777 306 ntBASIC8.43□□□□□ -1.06
PTPRMP28827 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC8.43□□□□□ -1.06
PTPRMP28827 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC8.43□□□□□ -1.06
PTPRMP28827 ZNF101P1-201ENST00000435701 1720 ntBASIC8.43□□□□□ -1.06
PTPRMP28827 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC8.43□□□□□ -1.06
PTPRMP28827 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC8.43□□□□□ -1.06
PTPRMP28827 OSGEPL1-207ENST00000522700 1779 ntAPPRIS P1 TSL 1 (best) BASIC8.43□□□□□ -1.06
PTPRMP28827 TNPO1P2-201ENST00000426249 2665 ntBASIC8.43□□□□□ -1.06
PTPRMP28827 MIAT-218ENST00000613780 10143 ntTSL 1 (best) BASIC8.43□□□□□ -1.06
PTPRMP28827 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
PTPRMP28827 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PTPRMP28827 LINC01903-201ENST00000580659 2149 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
PTPRMP28827 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PTPRMP28827 AC001226.2-204ENST00000638101 2645 ntAPPRIS ALT2 TSL 5 BASIC8.42□□□□□ -1.06
PTPRMP28827 AC096921.2-201ENST00000561507 1916 ntBASIC8.42□□□□□ -1.06
PTPRMP28827 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
PTPRMP28827 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
PTPRMP28827 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PTPRMP28827 ZNF438-208ENST00000538351 3284 ntAPPRIS ALT2 TSL 2 BASIC8.42□□□□□ -1.06
PTPRMP28827 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
PTPRMP28827 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
PTPRMP28827 RNU6ATAC21P-201ENST00000408656 126 ntBASIC8.42□□□□□ -1.06
PTPRMP28827 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC8.42□□□□□ -1.06
PTPRMP28827 NENFP1-201ENST00000419476 466 ntBASIC8.42□□□□□ -1.06
PTPRMP28827 RPL23AP60-201ENST00000450011 454 ntBASIC8.42□□□□□ -1.06
PTPRMP28827 SDC4P-201ENST00000453285 601 ntBASIC8.42□□□□□ -1.06
PTPRMP28827 AC002075.1-201ENST00000457396 676 ntBASIC8.42□□□□□ -1.06
PTPRMP28827 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC8.42□□□□□ -1.06
PTPRMP28827 AC073610.1-201ENST00000489971 396 ntBASIC8.42□□□□□ -1.06
PTPRMP28827 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
PTPRMP28827 LINS1-207ENST00000560133 1196 ntTSL 2 BASIC8.42□□□□□ -1.06
PTPRMP28827 AC106730.2-201ENST00000566641 540 ntBASIC8.42□□□□□ -1.06
PTPRMP28827 uc_338.26-201ENST00000612659 160 ntBASIC8.42□□□□□ -1.06
PTPRMP28827 WBP1LP8-201ENST00000617401 327 ntBASIC8.42□□□□□ -1.06
PTPRMP28827 MAPK10-365ENST00000641902 3825 ntBASIC8.42□□□□□ -1.06
PTPRMP28827 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
PTPRMP28827 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
PTPRMP28827 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC8.42□□□□□ -1.06
PTPRMP28827 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC8.42□□□□□ -1.06
PTPRMP28827 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC8.42□□□□□ -1.06
PTPRMP28827 GLRA2-201ENST00000218075 3216 ntAPPRIS P3 TSL 1 (best) BASIC8.42□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 85.1 ms