Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AP005119.1-201ENST00000580956 292 ntBASIC5.94□□□□□ -1.46
XRCC1P18887 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC5.94□□□□□ -1.46
XRCC1P18887 AC025857.2-201ENST00000602711 238 ntBASIC5.94□□□□□ -1.46
XRCC1P18887 AL139041.1-201ENST00000605480 610 ntBASIC5.94□□□□□ -1.46
XRCC1P18887 AL096712.1-201ENST00000614561 159 ntBASIC5.94□□□□□ -1.46
XRCC1P18887 MAPK10-350ENST00000641777 965 ntBASIC5.94□□□□□ -1.46
XRCC1P18887 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.94□□□□□ -1.46
XRCC1P18887 AL592429.1-201ENST00000403909 1473 ntBASIC5.94□□□□□ -1.46
XRCC1P18887 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.94□□□□□ -1.46
XRCC1P18887 AC024587.1-201ENST00000505925 2157 ntBASIC5.94□□□□□ -1.46
XRCC1P18887 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
XRCC1P18887 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
XRCC1P18887 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
XRCC1P18887 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
XRCC1P18887 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
XRCC1P18887 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
XRCC1P18887 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.93□□□□□ -1.46
XRCC1P18887 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
XRCC1P18887 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.93□□□□□ -1.46
XRCC1P18887 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
XRCC1P18887 ING3-204ENST00000431467 1447 ntTSL 2 BASIC5.93□□□□□ -1.46
XRCC1P18887 VNN3-203ENST00000392393 1603 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
XRCC1P18887 CASC19-260ENST00000641828 2001 ntBASIC5.93□□□□□ -1.46
XRCC1P18887 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
XRCC1P18887 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.93□□□□□ -1.46
XRCC1P18887 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC5.93□□□□□ -1.46
XRCC1P18887 SUGT1P2-201ENST00000379452 992 ntBASIC5.93□□□□□ -1.46
XRCC1P18887 AL354868.1-201ENST00000417077 482 ntBASIC5.93□□□□□ -1.46
XRCC1P18887 RPS15AP30-201ENST00000420976 390 ntBASIC5.93□□□□□ -1.46
XRCC1P18887 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.93□□□□□ -1.46
XRCC1P18887 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC5.93□□□□□ -1.46
XRCC1P18887 AL512593.1-201ENST00000444758 779 ntBASIC5.93□□□□□ -1.46
XRCC1P18887 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
XRCC1P18887 CST12P-201ENST00000457644 362 ntBASIC5.93□□□□□ -1.46
XRCC1P18887 RPL12P24-201ENST00000474907 486 ntBASIC5.93□□□□□ -1.46
XRCC1P18887 AC093719.1-201ENST00000480427 441 ntBASIC5.93□□□□□ -1.46
XRCC1P18887 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.93□□□□□ -1.46
XRCC1P18887 ST13P12-201ENST00000508958 1094 ntBASIC5.93□□□□□ -1.46
XRCC1P18887 AC090568.1-201ENST00000509499 856 ntBASIC5.93□□□□□ -1.46
XRCC1P18887 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC5.93□□□□□ -1.46
XRCC1P18887 AC136777.2-201ENST00000522979 358 ntBASIC5.93□□□□□ -1.46
XRCC1P18887 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.93□□□□□ -1.46
XRCC1P18887 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.93□□□□□ -1.46
XRCC1P18887 LINC01572-205ENST00000570152 360 ntTSL 3 BASIC5.93□□□□□ -1.46
XRCC1P18887 AC005244.1-201ENST00000582566 339 ntBASIC5.93□□□□□ -1.46
XRCC1P18887 AC015982.1-201ENST00000608113 465 ntBASIC5.93□□□□□ -1.46
XRCC1P18887 AC108673.3-201ENST00000609183 335 ntBASIC5.93□□□□□ -1.46
XRCC1P18887 AC096708.4-201ENST00000620563 552 ntBASIC5.93□□□□□ -1.46
XRCC1P18887 FO681491.1-202ENST00000623392 737 ntBASIC5.93□□□□□ -1.46
XRCC1P18887 AL357562.1-201ENST00000624911 609 ntBASIC5.93□□□□□ -1.46
XRCC1P18887 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.93□□□□□ -1.46
XRCC1P18887 SNAP23-223ENST00000627440 210 ntTSL 5 BASIC5.93□□□□□ -1.46
XRCC1P18887 RBMS3-AS2-206ENST00000629296 438 ntTSL 5 BASIC5.93□□□□□ -1.46
XRCC1P18887 AL355860.1-201ENST00000636087 1229 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
XRCC1P18887 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
XRCC1P18887 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC5.93□□□□□ -1.46
XRCC1P18887 SLC4A4-202ENST00000340595 7640 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
XRCC1P18887 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
XRCC1P18887 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC5.93□□□□□ -1.46
XRCC1P18887 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
XRCC1P18887 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.93□□□□□ -1.46
XRCC1P18887 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.93□□□□□ -1.46
XRCC1P18887 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.93□□□□□ -1.46
XRCC1P18887 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.93□□□□□ -1.46
XRCC1P18887 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.93□□□□□ -1.46
XRCC1P18887 ZNF337-AS1-201ENST00000414393 4666 ntTSL 2 BASIC5.93□□□□□ -1.46
XRCC1P18887 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
XRCC1P18887 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC5.93□□□□□ -1.46
XRCC1P18887 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
XRCC1P18887 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
XRCC1P18887 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
XRCC1P18887 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
XRCC1P18887 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
XRCC1P18887 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
XRCC1P18887 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.92□□□□□ -1.46
XRCC1P18887 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
XRCC1P18887 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
XRCC1P18887 NOVA1-213ENST00000574031 1431 ntTSL 2 BASIC5.92□□□□□ -1.46
XRCC1P18887 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
XRCC1P18887 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
XRCC1P18887 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
XRCC1P18887 AC008163.1-201ENST00000636281 1455 ntTSL 5 BASIC5.92□□□□□ -1.46
XRCC1P18887 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
XRCC1P18887 ZNF624-201ENST00000311331 4241 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
XRCC1P18887 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
XRCC1P18887 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
XRCC1P18887 RNFT1P3-201ENST00000340898 1052 ntBASIC5.92□□□□□ -1.46
XRCC1P18887 AC023490.2-201ENST00000359859 470 ntBASIC5.92□□□□□ -1.46
XRCC1P18887 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
XRCC1P18887 HMGN1P20-201ENST00000411849 300 ntBASIC5.92□□□□□ -1.46
XRCC1P18887 KRT8P51-201ENST00000438938 274 ntBASIC5.92□□□□□ -1.46
XRCC1P18887 AL158850.1-201ENST00000441249 914 ntTSL 3 BASIC5.92□□□□□ -1.46
XRCC1P18887 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
XRCC1P18887 OSTCP1-201ENST00000455507 450 ntBASIC5.92□□□□□ -1.46
XRCC1P18887 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.92□□□□□ -1.46
XRCC1P18887 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.92□□□□□ -1.46
XRCC1P18887 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.92□□□□□ -1.46
XRCC1P18887 AC060775.1-201ENST00000518241 520 ntBASIC5.92□□□□□ -1.46
XRCC1P18887 AP003028.1-203ENST00000525832 444 ntTSL 3 BASIC5.92□□□□□ -1.46
XRCC1P18887 OR52B2-201ENST00000530810 1079 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 75.4 ms