Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 AL596275.2-208ENST00000641192 594 ntBASIC6.43□□□□□ -1.38
VTNP04004 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
VTNP04004 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
VTNP04004 AC007842.1-201ENST00000597336 2039 ntBASIC6.43□□□□□ -1.38
VTNP04004 MOSPD2-201ENST00000380492 4163 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
VTNP04004 KCTD4-201ENST00000379108 1865 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
VTNP04004 LRRC36-205ENST00000563189 2104 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
VTNP04004 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC6.42□□□□□ -1.38
VTNP04004 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VTNP04004 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VTNP04004 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC6.42□□□□□ -1.38
VTNP04004 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VTNP04004 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
VTNP04004 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC6.42□□□□□ -1.38
VTNP04004 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
VTNP04004 MFSD8-219ENST00000641228 2559 ntBASIC6.42□□□□□ -1.38
VTNP04004 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.42□□□□□ -1.38
VTNP04004 LINC01138-208ENST00000639159 1521 ntTSL 5 BASIC6.42□□□□□ -1.38
VTNP04004 OR2J2-203ENST00000641417 2392 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
VTNP04004 FRMD4B-210ENST00000478263 3761 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
VTNP04004 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
VTNP04004 NAT1-210ENST00000545197 1827 ntTSL 5 BASIC6.42□□□□□ -1.38
VTNP04004 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VTNP04004 RNA5SP46-201ENST00000362370 120 ntBASIC6.42□□□□□ -1.38
VTNP04004 AL357752.1-201ENST00000412817 349 ntBASIC6.42□□□□□ -1.38
VTNP04004 OR2AT2P-201ENST00000413438 905 ntBASIC6.42□□□□□ -1.38
VTNP04004 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.42□□□□□ -1.38
VTNP04004 BTG3P1-201ENST00000435859 716 ntBASIC6.42□□□□□ -1.38
VTNP04004 LRRC37A14P-201ENST00000452297 462 ntBASIC6.42□□□□□ -1.38
VTNP04004 RPS17P15-201ENST00000475609 349 ntBASIC6.42□□□□□ -1.38
VTNP04004 RPL32P33-201ENST00000487023 394 ntBASIC6.42□□□□□ -1.38
VTNP04004 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC6.42□□□□□ -1.38
VTNP04004 AC138866.2-201ENST00000508650 584 ntBASIC6.42□□□□□ -1.38
VTNP04004 AC253576.1-201ENST00000511645 1156 ntBASIC6.42□□□□□ -1.38
VTNP04004 MIR2117-201ENST00000516780 80 ntBASIC6.42□□□□□ -1.38
VTNP04004 SCARNA6.1-201ENST00000516989 238 ntBASIC6.42□□□□□ -1.38
VTNP04004 HMGB1P42-201ENST00000532126 553 ntBASIC6.42□□□□□ -1.38
VTNP04004 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.42□□□□□ -1.38
VTNP04004 LYRM1-211ENST00000569023 769 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
VTNP04004 MIR4301-201ENST00000577203 66 ntBASIC6.42□□□□□ -1.38
VTNP04004 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC6.42□□□□□ -1.38
VTNP04004 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.42□□□□□ -1.38
VTNP04004 HCG18-243ENST00000602498 327 ntTSL 3 BASIC6.42□□□□□ -1.38
VTNP04004 FO393422.1-201ENST00000603908 708 ntBASIC6.42□□□□□ -1.38
VTNP04004 AC104695.2-201ENST00000605056 775 ntBASIC6.42□□□□□ -1.38
VTNP04004 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
VTNP04004 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
VTNP04004 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.42□□□□□ -1.38
VTNP04004 AC123912.3-201ENST00000600907 1367 ntBASIC6.42□□□□□ -1.38
VTNP04004 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.42□□□□□ -1.38
VTNP04004 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
VTNP04004 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.42□□□□□ -1.38
VTNP04004 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.41□□□□□ -1.38
VTNP04004 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
VTNP04004 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
VTNP04004 MRE11P1-201ENST00000464884 2127 ntBASIC6.41□□□□□ -1.38
VTNP04004 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
VTNP04004 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
VTNP04004 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
VTNP04004 AC130360.2-201ENST00000533477 1556 ntBASIC6.41□□□□□ -1.38
VTNP04004 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
VTNP04004 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC6.41□□□□□ -1.38
VTNP04004 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.41□□□□□ -1.38
VTNP04004 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
VTNP04004 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC6.41□□□□□ -1.38
VTNP04004 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.41□□□□□ -1.38
VTNP04004 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.41□□□□□ -1.38
VTNP04004 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC6.41□□□□□ -1.38
VTNP04004 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.41□□□□□ -1.38
VTNP04004 AC073909.1-201ENST00000447112 999 ntBASIC6.41□□□□□ -1.38
VTNP04004 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC6.41□□□□□ -1.38
VTNP04004 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC6.41□□□□□ -1.38
VTNP04004 AC074386.1-201ENST00000476560 767 ntBASIC6.41□□□□□ -1.38
VTNP04004 AC009120.1-201ENST00000493458 473 ntBASIC6.41□□□□□ -1.38
VTNP04004 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC6.41□□□□□ -1.38
VTNP04004 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.41□□□□□ -1.38
VTNP04004 RNU6-615P-201ENST00000516065 106 ntBASIC6.41□□□□□ -1.38
VTNP04004 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
VTNP04004 AC119868.1-202ENST00000584741 347 ntTSL 2 BASIC6.41□□□□□ -1.38
VTNP04004 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC6.41□□□□□ -1.38
VTNP04004 AP001542.1-201ENST00000591314 200 ntBASIC6.41□□□□□ -1.38
VTNP04004 AL589674.2-201ENST00000604304 337 ntBASIC6.41□□□□□ -1.38
VTNP04004 AL034374.2-201ENST00000605281 548 ntBASIC6.41□□□□□ -1.38
VTNP04004 AC009234.1-201ENST00000634985 895 ntTSL 5 BASIC6.41□□□□□ -1.38
VTNP04004 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC6.41□□□□□ -1.38
VTNP04004 KCNT2-203ENST00000451324 3146 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
VTNP04004 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
VTNP04004 ARHGAP21-202ENST00000376410 3526 ntTSL 5 BASIC6.41□□□□□ -1.38
VTNP04004 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
VTNP04004 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC6.41□□□□□ -1.38
VTNP04004 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
VTNP04004 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
VTNP04004 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC6.41□□□□□ -1.38
VTNP04004 MTND5P12-201ENST00000502851 1449 ntBASIC6.41□□□□□ -1.38
VTNP04004 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
VTNP04004 APOL4-203ENST00000352371 3227 ntAPPRIS P4 TSL 1 (best) BASIC6.4□□□□□ -1.38
VTNP04004 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
VTNP04004 OTX2-AS1-201ENST00000534909 2428 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
VTNP04004 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.4□□□□□ -1.38
VTNP04004 MC4R-201ENST00000299766 1666 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 73.2 ms