Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 ACOD1-202ENST00000449753 2097 ntAPPRIS ALT2 TSL 3 BASIC6.1□□□□□ -1.43
PDGFBP01127 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFBP01127 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.1□□□□□ -1.43
PDGFBP01127 OR2M3-202ENST00000641626 9913 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
PDGFBP01127 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFBP01127 SNORA11-201ENST00000408789 128 ntBASIC6.1□□□□□ -1.43
PDGFBP01127 EEF1A1P29-201ENST00000416082 1096 ntBASIC6.1□□□□□ -1.43
PDGFBP01127 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.1□□□□□ -1.43
PDGFBP01127 AC009784.1-201ENST00000426484 460 ntBASIC6.1□□□□□ -1.43
PDGFBP01127 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.1□□□□□ -1.43
PDGFBP01127 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC6.1□□□□□ -1.43
PDGFBP01127 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC6.1□□□□□ -1.43
PDGFBP01127 IGKV1OR10-1-201ENST00000442306 329 ntBASIC6.1□□□□□ -1.43
PDGFBP01127 CASP12-208ENST00000448103 1071 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFBP01127 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.1□□□□□ -1.43
PDGFBP01127 RPL7P61-201ENST00000451721 751 ntBASIC6.1□□□□□ -1.43
PDGFBP01127 AURKAPS1-201ENST00000451805 1212 ntBASIC6.1□□□□□ -1.43
PDGFBP01127 AC093166.4-201ENST00000457867 318 ntBASIC6.1□□□□□ -1.43
PDGFBP01127 AC023245.1-201ENST00000468501 517 ntBASIC6.1□□□□□ -1.43
PDGFBP01127 AL355032.1-201ENST00000472981 438 ntBASIC6.1□□□□□ -1.43
PDGFBP01127 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC6.1□□□□□ -1.43
PDGFBP01127 CASP12-210ENST00000494737 961 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFBP01127 NPM1P27-201ENST00000502784 830 ntBASIC6.1□□□□□ -1.43
PDGFBP01127 AC147055.3-201ENST00000510547 851 ntBASIC6.1□□□□□ -1.43
PDGFBP01127 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC6.1□□□□□ -1.43
PDGFBP01127 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC6.1□□□□□ -1.43
PDGFBP01127 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC6.1□□□□□ -1.43
PDGFBP01127 LINC01947-201ENST00000523742 566 ntTSL 4 BASIC6.1□□□□□ -1.43
PDGFBP01127 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC6.1□□□□□ -1.43
PDGFBP01127 AC020612.3-201ENST00000550644 570 ntTSL 2 BASIC6.1□□□□□ -1.43
PDGFBP01127 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC6.1□□□□□ -1.43
PDGFBP01127 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC6.1□□□□□ -1.43
PDGFBP01127 AC027229.1-201ENST00000583887 253 ntBASIC6.1□□□□□ -1.43
PDGFBP01127 CU634019.2-201ENST00000625184 593 ntTSL 3 BASIC6.1□□□□□ -1.43
PDGFBP01127 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFBP01127 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
PDGFBP01127 FOXJ3-204ENST00000372572 5352 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFBP01127 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFBP01127 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFBP01127 GABRA1-211ENST00000635880 1739 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
PDGFBP01127 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC6.1□□□□□ -1.43
PDGFBP01127 AQP9-202ENST00000536493 2803 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFBP01127 SHC4-202ENST00000396535 2799 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
PDGFBP01127 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.1□□□□□ -1.43
PDGFBP01127 GABRB2-209ENST00000612710 2470 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PDGFBP01127 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC6.09□□□□□ -1.43
PDGFBP01127 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PDGFBP01127 OFD1P10Y-201ENST00000434110 1433 ntBASIC6.09□□□□□ -1.43
PDGFBP01127 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDGFBP01127 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.09□□□□□ -1.43
PDGFBP01127 QRSL1-202ENST00000369046 4106 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDGFBP01127 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDGFBP01127 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
PDGFBP01127 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
PDGFBP01127 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC6.09□□□□□ -1.43
PDGFBP01127 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PDGFBP01127 AC119674.1-204ENST00000641348 1343 ntBASIC6.09□□□□□ -1.43
PDGFBP01127 MIR223-201ENST00000385204 110 ntBASIC6.09□□□□□ -1.43
PDGFBP01127 RPL5P5-201ENST00000392009 893 ntBASIC6.09□□□□□ -1.43
PDGFBP01127 RPL36P18-201ENST00000419316 318 ntBASIC6.09□□□□□ -1.43
PDGFBP01127 AK4P4-201ENST00000419465 646 ntBASIC6.09□□□□□ -1.43
PDGFBP01127 LINC00502-201ENST00000423621 445 ntTSL 3 BASIC6.09□□□□□ -1.43
PDGFBP01127 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC6.09□□□□□ -1.43
PDGFBP01127 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC6.09□□□□□ -1.43
PDGFBP01127 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.09□□□□□ -1.43
PDGFBP01127 AC245047.1-201ENST00000433276 873 ntBASIC6.09□□□□□ -1.43
PDGFBP01127 RPS12P17-201ENST00000438591 377 ntBASIC6.09□□□□□ -1.43
PDGFBP01127 AL772161.1-201ENST00000439130 476 ntBASIC6.09□□□□□ -1.43
PDGFBP01127 RPL5P9-201ENST00000448118 886 ntBASIC6.09□□□□□ -1.43
PDGFBP01127 MGAT2P1-201ENST00000449718 797 ntBASIC6.09□□□□□ -1.43
PDGFBP01127 AL139156.3-201ENST00000454802 394 ntBASIC6.09□□□□□ -1.43
PDGFBP01127 RANP1-206ENST00000455094 651 ntBASIC6.09□□□□□ -1.43
PDGFBP01127 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.09□□□□□ -1.43
PDGFBP01127 RN7SL172P-201ENST00000460535 303 ntBASIC6.09□□□□□ -1.43
PDGFBP01127 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.09□□□□□ -1.43
PDGFBP01127 AC084048.1-201ENST00000505494 640 ntTSL 3 BASIC6.09□□□□□ -1.43
PDGFBP01127 RNU6-615P-201ENST00000516065 106 ntBASIC6.09□□□□□ -1.43
PDGFBP01127 RN7SKP5-201ENST00000517045 272 ntBASIC6.09□□□□□ -1.43
PDGFBP01127 CDC42P3-201ENST00000518493 633 ntBASIC6.09□□□□□ -1.43
PDGFBP01127 IGLV3-6-201ENST00000523937 250 ntBASIC6.09□□□□□ -1.43
PDGFBP01127 AP000851.1-202ENST00000542119 743 ntTSL 3 BASIC6.09□□□□□ -1.43
PDGFBP01127 AL121579.2-201ENST00000555466 590 ntBASIC6.09□□□□□ -1.43
PDGFBP01127 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC6.09□□□□□ -1.43
PDGFBP01127 AC068870.2-201ENST00000620635 389 ntBASIC6.09□□□□□ -1.43
PDGFBP01127 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
PDGFBP01127 KLHL41-201ENST00000284669 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDGFBP01127 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDGFBP01127 CACNA2D3-210ENST00000490478 3557 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.43
PDGFBP01127 RAD17P2-201ENST00000451754 1977 ntBASIC6.09□□□□□ -1.43
PDGFBP01127 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
PDGFBP01127 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.09□□□□□ -1.44
PDGFBP01127 CASC19-243ENST00000641588 1546 ntBASIC6.09□□□□□ -1.44
PDGFBP01127 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
PDGFBP01127 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
PDGFBP01127 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC6.09□□□□□ -1.44
PDGFBP01127 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.44
PDGFBP01127 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
PDGFBP01127 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC6.08□□□□□ -1.44
PDGFBP01127 ING3-204ENST00000431467 1447 ntTSL 2 BASIC6.08□□□□□ -1.44
PDGFBP01127 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 137.2 ms