Protein–RNA interactions for Protein: O75150

RNF40, E3 ubiquitin-protein ligase BRE1B, humanhuman

Predictions only

Length 1,001 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40O75150 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
RNF40O75150 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
RNF40O75150 OR8H1-203ENST00000641600 2927 ntAPPRIS P2 BASIC8.65□□□□□ -1.03
RNF40O75150 TMEM72-AS1-201ENST00000450287 3300 ntTSL 2 BASIC8.65□□□□□ -1.03
RNF40O75150 NOS2P3-202ENST00000458685 3328 ntTSL 1 (best) BASIC8.65□□□□□ -1.03
RNF40O75150 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.03
RNF40O75150 SLC14A2-203ENST00000586448 3540 ntAPPRIS P1 TSL 2 BASIC8.64□□□□□ -1.03
RNF40O75150 CTAGE3P-201ENST00000454280 2404 ntBASIC8.64□□□□□ -1.03
RNF40O75150 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC8.64□□□□□ -1.03
RNF40O75150 MAMDC2-AS1-204ENST00000448377 1923 ntTSL 5 BASIC8.64□□□□□ -1.03
RNF40O75150 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
RNF40O75150 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
RNF40O75150 TIMD4-201ENST00000274532 1369 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
RNF40O75150 CUZD1-206ENST00000392790 2279 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RNF40O75150 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RNF40O75150 BRINP3-201ENST00000367462 3142 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RNF40O75150 RAPGEF5-202ENST00000401957 6159 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
RNF40O75150 ZNF252P-201ENST00000426361 5210 ntTSL 4 BASIC8.64□□□□□ -1.03
RNF40O75150 OCM-201ENST00000242104 695 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RNF40O75150 TGIF2LY-201ENST00000321217 905 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RNF40O75150 OR51H1-201ENST00000322059 999 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
RNF40O75150 FCAR-201ENST00000345937 608 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
RNF40O75150 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
RNF40O75150 LST1-211ENST00000376110 433 ntTSL 3 BASIC8.64□□□□□ -1.03
RNF40O75150 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RNF40O75150 RNU6-483P-201ENST00000384088 108 ntBASIC8.64□□□□□ -1.03
RNF40O75150 MIR185-201ENST00000385288 82 ntBASIC8.64□□□□□ -1.03
RNF40O75150 IGLV11-55-201ENST00000390286 381 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
RNF40O75150 GHRHR-204ENST00000409316 1292 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
RNF40O75150 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC8.64□□□□□ -1.03
RNF40O75150 BRWD1-AS1-201ENST00000423274 691 ntTSL 4 BASIC8.64□□□□□ -1.03
RNF40O75150 RPL5P6-201ENST00000425640 886 ntBASIC8.64□□□□□ -1.03
RNF40O75150 AL590729.1-201ENST00000427046 573 ntTSL 2 BASIC8.64□□□□□ -1.03
RNF40O75150 MTCO3P21-201ENST00000430791 643 ntBASIC8.64□□□□□ -1.03
RNF40O75150 RPS10P2-201ENST00000430953 494 ntBASIC8.64□□□□□ -1.03
RNF40O75150 RPSAP32-201ENST00000432681 526 ntBASIC8.64□□□□□ -1.03
RNF40O75150 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
RNF40O75150 UBE2FP3-201ENST00000436366 524 ntBASIC8.64□□□□□ -1.03
RNF40O75150 OR3B1P-201ENST00000437536 893 ntBASIC8.64□□□□□ -1.03
RNF40O75150 RAB9AP5-201ENST00000437794 597 ntBASIC8.64□□□□□ -1.03
RNF40O75150 AL445686.1-201ENST00000443086 348 ntBASIC8.64□□□□□ -1.03
RNF40O75150 RAB9AP2-201ENST00000443911 597 ntBASIC8.64□□□□□ -1.03
RNF40O75150 AL138930.1-201ENST00000446952 635 ntTSL 3 BASIC8.64□□□□□ -1.03
RNF40O75150 EZR-AS1-201ENST00000451712 217 ntTSL 5 BASIC8.64□□□□□ -1.03
RNF40O75150 RPL38P1-201ENST00000460914 211 ntBASIC8.64□□□□□ -1.03
RNF40O75150 AC007547.2-201ENST00000468802 360 ntBASIC8.64□□□□□ -1.03
RNF40O75150 RN7SL146P-201ENST00000472338 297 ntBASIC8.64□□□□□ -1.03
RNF40O75150 AC090013.1-201ENST00000485147 480 ntBASIC8.64□□□□□ -1.03
RNF40O75150 AC098679.2-201ENST00000513067 365 ntTSL 2 BASIC8.64□□□□□ -1.03
RNF40O75150 AC026719.2-201ENST00000515656 295 ntTSL 3 BASIC8.64□□□□□ -1.03
RNF40O75150 RNU6-277P-201ENST00000516272 106 ntBASIC8.64□□□□□ -1.03
RNF40O75150 RPL10P19-201ENST00000519013 301 ntBASIC8.64□□□□□ -1.03
RNF40O75150 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC8.64□□□□□ -1.03
RNF40O75150 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC8.64□□□□□ -1.03
RNF40O75150 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC8.64□□□□□ -1.03
RNF40O75150 OR5M7P-201ENST00000526140 972 ntBASIC8.64□□□□□ -1.03
RNF40O75150 OR4A11P-201ENST00000529557 906 ntBASIC8.64□□□□□ -1.03
RNF40O75150 AC079031.2-201ENST00000537742 615 ntBASIC8.64□□□□□ -1.03
RNF40O75150 AL359212.1-201ENST00000556608 614 ntBASIC8.64□□□□□ -1.03
RNF40O75150 MIR4666A-201ENST00000580160 79 ntBASIC8.64□□□□□ -1.03
RNF40O75150 AC090699.1-201ENST00000586264 321 ntBASIC8.64□□□□□ -1.03
RNF40O75150 LINC01483-205ENST00000591334 620 ntTSL 4 BASIC8.64□□□□□ -1.03
RNF40O75150 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC8.64□□□□□ -1.03
RNF40O75150 AC005261.1-201ENST00000601567 712 ntTSL 2 BASIC8.64□□□□□ -1.03
RNF40O75150 AP005137.2-201ENST00000609238 400 ntBASIC8.64□□□□□ -1.03
RNF40O75150 AL592494.3-201ENST00000609485 464 ntBASIC8.64□□□□□ -1.03
RNF40O75150 AL158801.5-201ENST00000623123 465 ntBASIC8.64□□□□□ -1.03
RNF40O75150 AC022743.1-201ENST00000624990 664 ntBASIC8.64□□□□□ -1.03
RNF40O75150 RPSAP68-201ENST00000625020 438 ntBASIC8.64□□□□□ -1.03
RNF40O75150 LINC01440-208ENST00000627300 699 ntTSL 5 BASIC8.64□□□□□ -1.03
RNF40O75150 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC8.64□□□□□ -1.03
RNF40O75150 LINC02034-201ENST00000635368 760 ntTSL 5 BASIC8.64□□□□□ -1.03
RNF40O75150 AC018793.5-201ENST00000640302 585 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
RNF40O75150 ESRRG-222ENST00000493748 2074 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RNF40O75150 AC135731.2-201ENST00000603029 2098 ntBASIC8.64□□□□□ -1.03
RNF40O75150 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC8.64□□□□□ -1.03
RNF40O75150 OR1L8-202ENST00000641027 2024 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
RNF40O75150 TRIM6-201ENST00000278302 3217 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
RNF40O75150 SIRPB1-205ENST00000381605 3241 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
RNF40O75150 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
RNF40O75150 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
RNF40O75150 NUCB2-208ENST00000529010 2274 ntAPPRIS P2 TSL 1 (best) BASIC8.64□□□□□ -1.03
RNF40O75150 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC8.64□□□□□ -1.03
RNF40O75150 TRIM48-201ENST00000417545 1445 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
RNF40O75150 AL035555.1-201ENST00000404462 1790 ntBASIC8.63□□□□□ -1.03
RNF40O75150 AC009220.2-201ENST00000489759 1751 ntBASIC8.63□□□□□ -1.03
RNF40O75150 AL353898.3-201ENST00000624679 1755 ntBASIC8.63□□□□□ -1.03
RNF40O75150 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
RNF40O75150 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
RNF40O75150 UTY-210ENST00000538878 6574 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
RNF40O75150 LRRC31-204ENST00000523069 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
RNF40O75150 AC093752.1-213ENST00000503038 2376 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
RNF40O75150 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
RNF40O75150 TCL6-206ENST00000467865 3663 ntTSL 2 BASIC8.63□□□□□ -1.03
RNF40O75150 ZNF260-202ENST00000523638 5666 ntAPPRIS P1 TSL 2 BASIC8.63□□□□□ -1.03
RNF40O75150 POU2F3-201ENST00000260264 2903 ntTSL 2 BASIC8.63□□□□□ -1.03
RNF40O75150 NQO1-201ENST00000320623 2912 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
RNF40O75150 TTR-201ENST00000237014 957 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
RNF40O75150 METTL21EP-201ENST00000298105 713 ntBASIC8.63□□□□□ -1.03
RNF40O75150 RNA5SP301-201ENST00000362537 121 ntBASIC8.63□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms