Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 AC016745.2-201ENST00000608834 3443 ntBASIC5.96□□□□□ -1.46
RIPK2O43353 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RIPK2O43353 AC015689.2-201ENST00000528172 1738 ntBASIC5.96□□□□□ -1.46
RIPK2O43353 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RIPK2O43353 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
RIPK2O43353 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC5.95□□□□□ -1.46
RIPK2O43353 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RIPK2O43353 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RIPK2O43353 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RIPK2O43353 AC110079.2-201ENST00000629462 1512 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RIPK2O43353 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RIPK2O43353 MYBPC1-221ENST00000551300 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
RIPK2O43353 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RIPK2O43353 RNA5SP77-201ENST00000365394 120 ntBASIC5.95□□□□□ -1.46
RIPK2O43353 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC5.95□□□□□ -1.46
RIPK2O43353 RNGTTP1-201ENST00000420965 728 ntBASIC5.95□□□□□ -1.46
RIPK2O43353 AL135785.1-201ENST00000422554 399 ntTSL 3 BASIC5.95□□□□□ -1.46
RIPK2O43353 VTI1BP4-201ENST00000427516 527 ntBASIC5.95□□□□□ -1.46
RIPK2O43353 AC128677.1-201ENST00000436016 442 ntBASIC5.95□□□□□ -1.46
RIPK2O43353 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.95□□□□□ -1.46
RIPK2O43353 CYCSP51-201ENST00000443545 318 ntBASIC5.95□□□□□ -1.46
RIPK2O43353 AL590004.3-202ENST00000445883 451 ntBASIC5.95□□□□□ -1.46
RIPK2O43353 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC5.95□□□□□ -1.46
RIPK2O43353 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.95□□□□□ -1.46
RIPK2O43353 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC5.95□□□□□ -1.46
RIPK2O43353 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.95□□□□□ -1.46
RIPK2O43353 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.95□□□□□ -1.46
RIPK2O43353 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC5.95□□□□□ -1.46
RIPK2O43353 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.95□□□□□ -1.46
RIPK2O43353 MIR4732-201ENST00000581873 76 ntBASIC5.95□□□□□ -1.46
RIPK2O43353 AC036176.3-201ENST00000602456 418 ntBASIC5.95□□□□□ -1.46
RIPK2O43353 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RIPK2O43353 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
RIPK2O43353 DAZ2-203ENST00000382424 3853 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
RIPK2O43353 Z83820.1-201ENST00000456978 1499 ntBASIC5.95□□□□□ -1.46
RIPK2O43353 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
RIPK2O43353 BBX-201ENST00000325805 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
RIPK2O43353 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
RIPK2O43353 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
RIPK2O43353 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RIPK2O43353 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.94□□□□□ -1.46
RIPK2O43353 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
RIPK2O43353 OR4N5-202ENST00000641086 2187 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
RIPK2O43353 AP001029.2-203ENST00000589795 4910 ntBASIC5.94□□□□□ -1.46
RIPK2O43353 EEF1A1P33-201ENST00000554413 1362 ntBASIC5.94□□□□□ -1.46
RIPK2O43353 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.94□□□□□ -1.46
RIPK2O43353 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RIPK2O43353 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.94□□□□□ -1.46
RIPK2O43353 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RIPK2O43353 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RIPK2O43353 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RIPK2O43353 YWHAZP4-201ENST00000392459 708 ntBASIC5.94□□□□□ -1.46
RIPK2O43353 MIR1266-201ENST00000408125 84 ntBASIC5.94□□□□□ -1.46
RIPK2O43353 PSMD10P2-201ENST00000432890 672 ntBASIC5.94□□□□□ -1.46
RIPK2O43353 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.94□□□□□ -1.46
RIPK2O43353 AL445928.1-201ENST00000435545 222 ntBASIC5.94□□□□□ -1.46
RIPK2O43353 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.94□□□□□ -1.46
RIPK2O43353 AL645936.1-201ENST00000441979 518 ntBASIC5.94□□□□□ -1.46
RIPK2O43353 SEPT14P12-201ENST00000442280 560 ntBASIC5.94□□□□□ -1.46
RIPK2O43353 VN1R96P-201ENST00000446052 858 ntBASIC5.94□□□□□ -1.46
RIPK2O43353 SLAMF6P1-201ENST00000451067 602 ntBASIC5.94□□□□□ -1.46
RIPK2O43353 RPL31P11-202ENST00000454082 372 ntBASIC5.94□□□□□ -1.46
RIPK2O43353 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC5.94□□□□□ -1.46
RIPK2O43353 AC090602.1-201ENST00000469695 252 ntBASIC5.94□□□□□ -1.46
RIPK2O43353 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.94□□□□□ -1.46
RIPK2O43353 AC097515.1-201ENST00000512370 435 ntTSL 2 BASIC5.94□□□□□ -1.46
RIPK2O43353 AC021146.10-201ENST00000515628 706 ntBASIC5.94□□□□□ -1.46
RIPK2O43353 AC110056.1-201ENST00000525759 911 ntBASIC5.94□□□□□ -1.46
RIPK2O43353 AC036111.2-201ENST00000533247 901 ntBASIC5.94□□□□□ -1.46
RIPK2O43353 TDGP1-201ENST00000543961 1229 ntBASIC5.94□□□□□ -1.46
RIPK2O43353 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.94□□□□□ -1.46
RIPK2O43353 MYL6-213ENST00000549017 502 ntTSL 3 BASIC5.94□□□□□ -1.46
RIPK2O43353 AC068408.1-201ENST00000577406 1144 ntBASIC5.94□□□□□ -1.46
RIPK2O43353 AC024267.3-201ENST00000579673 562 ntTSL 5 BASIC5.94□□□□□ -1.46
RIPK2O43353 AP005136.2-201ENST00000583253 1049 ntBASIC5.94□□□□□ -1.46
RIPK2O43353 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.94□□□□□ -1.46
RIPK2O43353 Metazoa_SRP.195-201ENST00000612667 287 ntBASIC5.94□□□□□ -1.46
RIPK2O43353 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC5.94□□□□□ -1.46
RIPK2O43353 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
RIPK2O43353 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.94□□□□□ -1.46
RIPK2O43353 IL1RAP-205ENST00000412504 4875 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
RIPK2O43353 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.94□□□□□ -1.46
RIPK2O43353 CENPI-204ENST00000423383 2314 ntAPPRIS P3 TSL 5 BASIC5.94□□□□□ -1.46
RIPK2O43353 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.94□□□□□ -1.46
RIPK2O43353 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC5.94□□□□□ -1.46
RIPK2O43353 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.94□□□□□ -1.46
RIPK2O43353 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
RIPK2O43353 AC007750.1-202ENST00000418968 4098 ntTSL 5 BASIC5.94□□□□□ -1.46
RIPK2O43353 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC5.94□□□□□ -1.46
RIPK2O43353 TRPC5OS-201ENST00000371970 2806 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RIPK2O43353 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.93□□□□□ -1.46
RIPK2O43353 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.93□□□□□ -1.46
RIPK2O43353 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC5.93□□□□□ -1.46
RIPK2O43353 UGT2B24P-201ENST00000514441 1597 ntBASIC5.93□□□□□ -1.46
RIPK2O43353 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC5.93□□□□□ -1.46
RIPK2O43353 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RIPK2O43353 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RIPK2O43353 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
RIPK2O43353 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
RIPK2O43353 AC007938.2-201ENST00000604666 2634 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms