Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC10.03□□□□□ -0.8
CUX2O14529 RPS7P3-201ENST00000443360 580 ntBASIC10.03□□□□□ -0.8
CUX2O14529 RPS23P7-201ENST00000466210 444 ntBASIC10.03□□□□□ -0.8
CUX2O14529 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC10.03□□□□□ -0.8
CUX2O14529 AC074050.3-201ENST00000569175 441 ntTSL 4 BASIC10.03□□□□□ -0.8
CUX2O14529 RPL27-207ENST00000590864 569 ntTSL 2 BASIC10.03□□□□□ -0.8
CUX2O14529 LINC01359-206ENST00000634775 888 ntTSL 5 BASIC10.03□□□□□ -0.8
CUX2O14529 ZNF43-205ENST00000594012 5584 ntAPPRIS ALT2 TSL 2 BASIC10.03□□□□□ -0.8
CUX2O14529 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC10.03□□□□□ -0.8
CUX2O14529 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC10.02□□□□□ -0.8
CUX2O14529 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.8
CUX2O14529 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC10.02□□□□□ -0.8
CUX2O14529 PPARGC1B-201ENST00000309241 10568 ntAPPRIS P3 TSL 1 (best) BASIC10.02□□□□□ -0.8
CUX2O14529 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC10.02□□□□□ -0.8
CUX2O14529 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC10.02□□□□□ -0.81
CUX2O14529 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
CUX2O14529 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
CUX2O14529 CRYBG3-201ENST00000389622 10729 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
CUX2O14529 ALG13-202ENST00000371979 2770 ntTSL 1 (best) BASIC10.02□□□□□ -0.81
CUX2O14529 MRE11P1-201ENST00000464884 2127 ntBASIC10.02□□□□□ -0.81
CUX2O14529 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
CUX2O14529 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC10.02□□□□□ -0.81
CUX2O14529 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC10.02□□□□□ -0.81
CUX2O14529 RNA5SP487-201ENST00000410186 122 ntBASIC10.02□□□□□ -0.81
CUX2O14529 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC10.02□□□□□ -0.81
CUX2O14529 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC10.02□□□□□ -0.81
CUX2O14529 RN7SL51P-201ENST00000468230 285 ntBASIC10.02□□□□□ -0.81
CUX2O14529 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC10.02□□□□□ -0.81
CUX2O14529 MIR5096-201ENST00000583713 70 ntBASIC10.02□□□□□ -0.81
CUX2O14529 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC10.02□□□□□ -0.81
CUX2O14529 DLEU1_1.1-201ENST00000618107 190 ntBASIC10.02□□□□□ -0.81
CUX2O14529 AL136531.3-201ENST00000624378 3658 ntBASIC10.02□□□□□ -0.81
CUX2O14529 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CUX2O14529 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
CUX2O14529 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC10.02□□□□□ -0.81
CUX2O14529 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CUX2O14529 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC10.02□□□□□ -0.81
CUX2O14529 KPNA1-201ENST00000344337 6830 ntAPPRIS P1 TSL 1 (best) BASIC10.02□□□□□ -0.81
CUX2O14529 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC10.01□□□□□ -0.81
CUX2O14529 NCR3LG1-201ENST00000338965 6438 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CUX2O14529 GMDS-AS1-202ENST00000505870 8217 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CUX2O14529 AP001541.1-201ENST00000623322 1904 ntBASIC10.01□□□□□ -0.81
CUX2O14529 ANGEL2-201ENST00000360506 4323 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CUX2O14529 ERRFI1-202ENST00000467067 2097 ntTSL 2 BASIC10.01□□□□□ -0.81
CUX2O14529 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC10.01□□□□□ -0.81
CUX2O14529 RNA5SP478-201ENST00000364657 115 ntBASIC10.01□□□□□ -0.81
CUX2O14529 LYST-AS1-201ENST00000412098 521 ntTSL 3 BASIC10.01□□□□□ -0.81
CUX2O14529 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC10.01□□□□□ -0.81
CUX2O14529 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CUX2O14529 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC10.01□□□□□ -0.81
CUX2O14529 AC019185.1-201ENST00000442718 389 ntBASIC10.01□□□□□ -0.81
CUX2O14529 AL157777.1-201ENST00000468100 304 ntBASIC10.01□□□□□ -0.81
CUX2O14529 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC10.01□□□□□ -0.81
CUX2O14529 OR56A7P-201ENST00000524865 941 ntBASIC10.01□□□□□ -0.81
CUX2O14529 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC10.01□□□□□ -0.81
CUX2O14529 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC10.01□□□□□ -0.81
CUX2O14529 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC10.01□□□□□ -0.81
CUX2O14529 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC10.01□□□□□ -0.81
CUX2O14529 Metazoa_SRP.43-201ENST00000616394 271 ntBASIC10.01□□□□□ -0.81
CUX2O14529 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC10.01□□□□□ -0.81
CUX2O14529 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC10.01□□□□□ -0.81
CUX2O14529 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC10.01□□□□□ -0.81
CUX2O14529 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC10.01□□□□□ -0.81
CUX2O14529 G6PC-201ENST00000253801 3096 ntAPPRIS P1 TSL 1 (best) BASIC10.01□□□□□ -0.81
CUX2O14529 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC10.01□□□□□ -0.81
CUX2O14529 OR52I1-202ENST00000530443 2961 ntAPPRIS P1 BASIC10.01□□□□□ -0.81
CUX2O14529 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CUX2O14529 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC10□□□□□ -0.81
CUX2O14529 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC10□□□□□ -0.81
CUX2O14529 GRIN2A-202ENST00000396573 14450 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CUX2O14529 OR7C1-205ENST00000642030 11778 ntAPPRIS P1 BASIC10□□□□□ -0.81
CUX2O14529 AC011815.2-201ENST00000618230 2021 ntBASIC10□□□□□ -0.81
CUX2O14529 OR2T33-202ENST00000641220 4118 ntAPPRIS P1 BASIC10□□□□□ -0.81
CUX2O14529 LRRFIP2-201ENST00000336686 3208 ntTSL 1 (best) BASIC10□□□□□ -0.81
CUX2O14529 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC10□□□□□ -0.81
CUX2O14529 AL161912.4-201ENST00000623889 2468 ntBASIC10□□□□□ -0.81
CUX2O14529 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC10□□□□□ -0.81
CUX2O14529 RPS27AP3-201ENST00000453803 454 ntBASIC10□□□□□ -0.81
CUX2O14529 AC068522.1-201ENST00000482895 345 ntBASIC10□□□□□ -0.81
CUX2O14529 RNA5SP400-201ENST00000517155 111 ntBASIC10□□□□□ -0.81
CUX2O14529 BMPR1APS2-201ENST00000527904 1012 ntBASIC10□□□□□ -0.81
CUX2O14529 LINC02454-201ENST00000539116 589 ntTSL 4 BASIC10□□□□□ -0.81
CUX2O14529 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC10□□□□□ -0.81
CUX2O14529 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC10□□□□□ -0.81
CUX2O14529 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC10□□□□□ -0.81
CUX2O14529 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC10□□□□□ -0.81
CUX2O14529 USP6-201ENST00000250066 7976 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CUX2O14529 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CUX2O14529 CASC19-281ENST00000642118 1554 ntBASIC10□□□□□ -0.81
CUX2O14529 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC10□□□□□ -0.81
CUX2O14529 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC10□□□□□ -0.81
CUX2O14529 SGO2-201ENST00000357799 4214 ntAPPRIS P2 TSL 1 (best) BASIC10□□□□□ -0.81
CUX2O14529 GRIA4-212ENST00000530497 5059 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
CUX2O14529 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
CUX2O14529 ATR-201ENST00000350721 8249 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CUX2O14529 THADA-204ENST00000403856 6939 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CUX2O14529 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
CUX2O14529 DEFB1-201ENST00000297439 478 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
CUX2O14529 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
CUX2O14529 RNU6-398P-201ENST00000384143 109 ntBASIC9.99□□□□□ -0.81
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms