Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.36□□□□□ -1.39
O00370 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.36□□□□□ -1.39
O00370 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
O00370 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
O00370 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
O00370 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.36□□□□□ -1.39
O00370 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
O00370 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
O00370 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC6.36□□□□□ -1.39
O00370 QRSL1P1-201ENST00000400977 1540 ntBASIC6.35□□□□□ -1.39
O00370 AL359955.1-201ENST00000455242 3275 ntBASIC6.35□□□□□ -1.39
O00370 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
O00370 LINC00698-203ENST00000468072 1957 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
O00370 AC015971.1-203ENST00000426549 1948 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
O00370 AC083837.1-201ENST00000565297 2994 ntBASIC6.35□□□□□ -1.39
O00370 GPAM-202ENST00000369425 5664 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
O00370 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
O00370 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
O00370 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
O00370 RNFT1P3-201ENST00000340898 1052 ntBASIC6.35□□□□□ -1.39
O00370 KIF16B-202ENST00000355755 606 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
O00370 RNA5SP211-201ENST00000365516 117 ntBASIC6.35□□□□□ -1.39
O00370 TPT1-204ENST00000379060 764 ntTSL 5 BASIC6.35□□□□□ -1.39
O00370 YAF2-202ENST00000380790 1211 ntTSL 2 BASIC6.35□□□□□ -1.39
O00370 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.35□□□□□ -1.39
O00370 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC6.35□□□□□ -1.39
O00370 RPL5P2-201ENST00000429598 854 ntBASIC6.35□□□□□ -1.39
O00370 AC069154.1-201ENST00000432914 542 ntBASIC6.35□□□□□ -1.39
O00370 AL365220.1-201ENST00000432923 399 ntBASIC6.35□□□□□ -1.39
O00370 TRGC2-201ENST00000436911 1013 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
O00370 ATP5LP2-201ENST00000440646 311 ntBASIC6.35□□□□□ -1.39
O00370 RPS7P3-201ENST00000443360 580 ntBASIC6.35□□□□□ -1.39
O00370 AC005077.1-201ENST00000449226 375 ntBASIC6.35□□□□□ -1.39
O00370 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.35□□□□□ -1.39
O00370 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC6.35□□□□□ -1.39
O00370 CST12P-201ENST00000457644 362 ntBASIC6.35□□□□□ -1.39
O00370 AC023245.1-201ENST00000468501 517 ntBASIC6.35□□□□□ -1.39
O00370 SNRPCP3-201ENST00000474888 476 ntBASIC6.35□□□□□ -1.39
O00370 AC097486.1-201ENST00000515331 210 ntBASIC6.35□□□□□ -1.39
O00370 AC025366.1-201ENST00000523264 202 ntTSL 3 BASIC6.35□□□□□ -1.39
O00370 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.35□□□□□ -1.39
O00370 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC6.35□□□□□ -1.39
O00370 AL049779.3-201ENST00000557141 606 ntBASIC6.35□□□□□ -1.39
O00370 LINC02193-202ENST00000566864 719 ntTSL 3 BASIC6.35□□□□□ -1.39
O00370 LINC00556-201ENST00000569603 412 ntBASIC6.35□□□□□ -1.39
O00370 AC134669.1-201ENST00000581275 672 ntBASIC6.35□□□□□ -1.39
O00370 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.35□□□□□ -1.39
O00370 ZNF486-202ENST00000597083 734 ntTSL 3 BASIC6.35□□□□□ -1.39
O00370 AC108673.3-201ENST00000609183 335 ntBASIC6.35□□□□□ -1.39
O00370 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
O00370 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC6.35□□□□□ -1.39
O00370 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC6.35□□□□□ -1.39
O00370 AL161457.2-201ENST00000629181 630 ntTSL 5 BASIC6.35□□□□□ -1.39
O00370 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
O00370 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.35□□□□□ -1.39
O00370 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.35□□□□□ -1.39
O00370 AC012254.3-201ENST00000591183 2117 ntBASIC6.35□□□□□ -1.39
O00370 CASC19-238ENST00000641523 1558 ntBASIC6.35□□□□□ -1.39
O00370 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
O00370 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.35□□□□□ -1.39
O00370 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
O00370 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
O00370 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
O00370 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC6.34□□□□□ -1.39
O00370 CAP1P2-201ENST00000417455 1409 ntBASIC6.34□□□□□ -1.39
O00370 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
O00370 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
O00370 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.34□□□□□ -1.39
O00370 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
O00370 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.34□□□□□ -1.39
O00370 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.34□□□□□ -1.39
O00370 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
O00370 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
O00370 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.34□□□□□ -1.39
O00370 ZNF525-201ENST00000467003 6107 ntTSL 4 BASIC6.34□□□□□ -1.39
O00370 OR8U1-201ENST00000302270 930 ntAPPRIS P1 BASIC6.34□□□□□ -1.39
O00370 CXADRP1-201ENST00000398098 1095 ntBASIC6.34□□□□□ -1.39
O00370 SNRPEP6-201ENST00000407465 277 ntBASIC6.34□□□□□ -1.39
O00370 KIF4CP-201ENST00000422742 1279 ntBASIC6.34□□□□□ -1.39
O00370 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.34□□□□□ -1.39
O00370 USP24P1-201ENST00000433802 779 ntBASIC6.34□□□□□ -1.39
O00370 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC6.34□□□□□ -1.39
O00370 ACA64.4-201ENST00000459070 127 ntBASIC6.34□□□□□ -1.39
O00370 RPS26P24-201ENST00000497656 331 ntBASIC6.34□□□□□ -1.39
O00370 AC008443.2-201ENST00000499096 566 ntTSL 2 BASIC6.34□□□□□ -1.39
O00370 LINC02485-202ENST00000511899 770 ntTSL 3 BASIC6.34□□□□□ -1.39
O00370 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.34□□□□□ -1.39
O00370 AC136777.2-201ENST00000522979 358 ntBASIC6.34□□□□□ -1.39
O00370 KLRK1-204ENST00000540818 951 ntAPPRIS P1 TSL 1 (best) BASIC6.34□□□□□ -1.39
O00370 IFNG-AS1-203ENST00000541715 902 ntTSL 3 BASIC6.34□□□□□ -1.39
O00370 LINC02392-201ENST00000548172 537 ntTSL 4 BASIC6.34□□□□□ -1.39
O00370 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.34□□□□□ -1.39
O00370 AC079905.1-201ENST00000549280 475 ntBASIC6.34□□□□□ -1.39
O00370 AC007956.1-201ENST00000555623 542 ntBASIC6.34□□□□□ -1.39
O00370 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.34□□□□□ -1.39
O00370 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC6.34□□□□□ -1.39
O00370 AC005244.1-201ENST00000582566 339 ntBASIC6.34□□□□□ -1.39
O00370 AC090236.2-201ENST00000587933 1101 ntBASIC6.34□□□□□ -1.39
O00370 AC092070.2-201ENST00000597550 545 ntTSL 4 BASIC6.34□□□□□ -1.39
O00370 AL499605.1-201ENST00000604628 403 ntBASIC6.34□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms