Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
UPK1AO00322 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
UPK1AO00322 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
UPK1AO00322 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
UPK1AO00322 RN7SKP77-201ENST00000363261 353 ntBASIC5.54□□□□□ -1.52
UPK1AO00322 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
UPK1AO00322 FIGN-202ENST00000409634 746 ntTSL 5 BASIC5.54□□□□□ -1.52
UPK1AO00322 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.54□□□□□ -1.52
UPK1AO00322 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.54□□□□□ -1.52
UPK1AO00322 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC5.54□□□□□ -1.52
UPK1AO00322 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.54□□□□□ -1.52
UPK1AO00322 GAPDHP75-201ENST00000433910 943 ntBASIC5.54□□□□□ -1.52
UPK1AO00322 AC092162.2-201ENST00000438143 532 ntTSL 4 BASIC5.54□□□□□ -1.52
UPK1AO00322 AL663074.2-201ENST00000440621 479 ntBASIC5.54□□□□□ -1.52
UPK1AO00322 AC068491.1-201ENST00000449539 1241 ntBASIC5.54□□□□□ -1.52
UPK1AO00322 AC118758.1-202ENST00000454719 225 ntBASIC5.54□□□□□ -1.52
UPK1AO00322 AC098847.1-201ENST00000473094 348 ntBASIC5.54□□□□□ -1.52
UPK1AO00322 RPL38P3-201ENST00000484463 213 ntBASIC5.54□□□□□ -1.52
UPK1AO00322 AC116634.1-201ENST00000506926 447 ntTSL 5 BASIC5.54□□□□□ -1.52
UPK1AO00322 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.54□□□□□ -1.52
UPK1AO00322 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.54□□□□□ -1.52
UPK1AO00322 OR4A42P-201ENST00000531397 938 ntBASIC5.54□□□□□ -1.52
UPK1AO00322 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC5.54□□□□□ -1.52
UPK1AO00322 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.54□□□□□ -1.52
UPK1AO00322 INO80-AS1-201ENST00000558967 312 ntTSL 5 BASIC5.54□□□□□ -1.52
UPK1AO00322 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC5.54□□□□□ -1.52
UPK1AO00322 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.54□□□□□ -1.52
UPK1AO00322 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC5.54□□□□□ -1.52
UPK1AO00322 AL021918.2-201ENST00000613415 194 ntBASIC5.54□□□□□ -1.52
UPK1AO00322 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC5.54□□□□□ -1.52
UPK1AO00322 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
UPK1AO00322 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.54□□□□□ -1.52
UPK1AO00322 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC5.54□□□□□ -1.52
UPK1AO00322 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.54□□□□□ -1.52
UPK1AO00322 LDAH-211ENST00000541941 3807 ntTSL 2 BASIC5.54□□□□□ -1.52
UPK1AO00322 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.54□□□□□ -1.52
UPK1AO00322 CYLD-207ENST00000564326 3259 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
UPK1AO00322 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
UPK1AO00322 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
UPK1AO00322 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
UPK1AO00322 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.53□□□□□ -1.52
UPK1AO00322 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC5.53□□□□□ -1.52
UPK1AO00322 LAMTOR3-202ENST00000499666 4226 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
UPK1AO00322 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.53□□□□□ -1.52
UPK1AO00322 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
UPK1AO00322 SELENOWP1-201ENST00000322792 252 ntBASIC5.53□□□□□ -1.52
UPK1AO00322 SNTN-201ENST00000343837 1090 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
UPK1AO00322 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
UPK1AO00322 NPM1P37-201ENST00000403105 874 ntBASIC5.53□□□□□ -1.52
UPK1AO00322 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC5.53□□□□□ -1.52
UPK1AO00322 RPS4XP5-201ENST00000419038 768 ntBASIC5.53□□□□□ -1.52
UPK1AO00322 KIF4CP-201ENST00000422742 1279 ntBASIC5.53□□□□□ -1.52
UPK1AO00322 LINC01760-201ENST00000423410 382 ntTSL 2 BASIC5.53□□□□□ -1.52
UPK1AO00322 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC5.53□□□□□ -1.52
UPK1AO00322 FTO-202ENST00000431610 707 ntTSL 3 BASIC5.53□□□□□ -1.52
UPK1AO00322 AP000295.1-201ENST00000433395 1000 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
UPK1AO00322 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.53□□□□□ -1.52
UPK1AO00322 RPS12P17-201ENST00000438591 377 ntBASIC5.53□□□□□ -1.52
UPK1AO00322 BMS1P10-201ENST00000443754 1120 ntBASIC5.53□□□□□ -1.52
UPK1AO00322 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
UPK1AO00322 AC005077.1-201ENST00000449226 375 ntBASIC5.53□□□□□ -1.52
UPK1AO00322 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC5.53□□□□□ -1.52
UPK1AO00322 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC5.53□□□□□ -1.52
UPK1AO00322 RBBP4P1-201ENST00000502424 1276 ntBASIC5.53□□□□□ -1.52
UPK1AO00322 AK6-203ENST00000502819 743 ntTSL 5 BASIC5.53□□□□□ -1.52
UPK1AO00322 AC122718.2-201ENST00000505325 591 ntBASIC5.53□□□□□ -1.52
UPK1AO00322 AC111000.6-201ENST00000514471 709 ntBASIC5.53□□□□□ -1.52
UPK1AO00322 RN7SKP238-201ENST00000516483 249 ntBASIC5.53□□□□□ -1.52
UPK1AO00322 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC5.53□□□□□ -1.52
UPK1AO00322 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC5.53□□□□□ -1.52
UPK1AO00322 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.53□□□□□ -1.52
UPK1AO00322 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.53□□□□□ -1.52
UPK1AO00322 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.53□□□□□ -1.52
UPK1AO00322 AC073941.1-201ENST00000559148 539 ntTSL 4 BASIC5.53□□□□□ -1.52
UPK1AO00322 AL163952.1-202ENST00000569625 600 ntBASIC5.53□□□□□ -1.52
UPK1AO00322 AC005244.1-201ENST00000582566 339 ntBASIC5.53□□□□□ -1.52
UPK1AO00322 LINC01050-201ENST00000604485 760 ntTSL 3 BASIC5.53□□□□□ -1.52
UPK1AO00322 AC009779.8-202ENST00000607990 932 ntBASIC5.53□□□□□ -1.52
UPK1AO00322 MIR6809-201ENST00000612189 116 ntBASIC5.53□□□□□ -1.52
UPK1AO00322 AL445670.1-201ENST00000618889 801 ntBASIC5.53□□□□□ -1.52
UPK1AO00322 AL596275.2-207ENST00000641188 675 ntBASIC5.53□□□□□ -1.52
UPK1AO00322 AC093225.1-201ENST00000506867 1408 ntBASIC5.53□□□□□ -1.52
UPK1AO00322 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
UPK1AO00322 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
UPK1AO00322 AC023632.6-201ENST00000624338 2177 ntBASIC5.53□□□□□ -1.52
UPK1AO00322 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
UPK1AO00322 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
UPK1AO00322 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
UPK1AO00322 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
UPK1AO00322 QRSL1P1-201ENST00000400977 1540 ntBASIC5.53□□□□□ -1.52
UPK1AO00322 ALB-202ENST00000401494 1659 ntTSL 5 BASIC5.53□□□□□ -1.52
UPK1AO00322 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC5.53□□□□□ -1.52
UPK1AO00322 RORB-201ENST00000376896 9551 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
UPK1AO00322 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
UPK1AO00322 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC5.52□□□□□ -1.53
UPK1AO00322 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
UPK1AO00322 NOSTRIN-207ENST00000445023 1569 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
UPK1AO00322 CAV1-205ENST00000405348 2443 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
UPK1AO00322 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
UPK1AO00322 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 109.4 ms